IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
957	 56.67	0	956573..956722	+	49	161618948	-	BCAN_A1011	-	hypothetical protein
958	 57.62	0	956722..958269	+	515	161618949	metG	BCAN_A1012	-	methionyl-tRNA synthetase
959	 55.81	0	958278..959069	+	263	161618950	-	BCAN_A1013	-	TatD family hydrolase
960	 56.53	0	959072..959890	+	272	161618951	-	BCAN_A1014	-	beta-lactamase domain-containing protein
961	 59.50	0	959940..961739	-	599	161618952	-	BCAN_A1015	-	cyclic beta-1,2-glucan ABC transporter
962	 59.23	0	962052..963032	+	326	161618953	-	BCAN_A1016	-	RluA family pseudouridine synthase
963	 54.44	0	963035..963958	+	307	161618954	-	BCAN_A1017	-	hypothetical protein
964	 57.66	0	963955..964620	+	221	161618955	-	BCAN_A1018	-	HAD family hydrolase
965	 58.24	0	964662..965444	+	260	161618956	-	BCAN_A1019	-	ATP12 ATPase
966	 55.39	0	965570..966979	-	469	161618957	glnA	BCAN_A1020	-	glutamine synthetase, type I
967	 53.69	0	967127..967465	-	112	161618958	glnB	BCAN_A1021	-	nitrogen regulatory protein P-II
968	 60.62	0	967772..969277	+	501	161618959	-	BCAN_A1022	-	YjeF family protein
969	 61.46	+1	969308..969499	-	63	161618960	-	BCAN_A1023	-	hypothetical protein
970	 57.59	0	969577..970281	-	234	161618961	gph	BCAN_A1024	-	phosphoglycolate phosphatase
971	 57.37	0	970628..971326	+	232	161618962	rpiA	BCAN_A1025	-	ribose-5-phosphate isomerase A
972	 60.15	0	971352..971888	+	178	161618963	-	BCAN_A1026	-	hypothetical protein
973	 55.84	0	972042..973436	+	464	161618964	gor	BCAN_A1027	-	glutathione reductase
974	 59.11	0	973645..975033	+	462	161618965	-	BCAN_A1028	-	3-deoxy-7-phosphoheptulonate synthase
975	 53.56	0	975137..975487	+	116	161618966	dgkA	BCAN_A1029	-	diacylglycerol kinase
976	 57.02	0	975552..977231	+	559	161618967	nadE	BCAN_A1030	-	NAD synthetase
977	 57.21	0	977243..978616	+	457	161618968	gltX	BCAN_A1031	-	glutamyl-tRNA synthetase
978	 59.53	0	979430..981754	-	774	161618969	-	BCAN_A1032	-	malic enzyme
979	 57.49	0	981972..982952	-	326	161618970	-	BCAN_A1033	-	mandelate racemase/muconate lactonizing protein
980	 55.70	0	983013..984188	+	391	161618971	-	BCAN_A1034	-	hypothetical protein
981	 56.41	0	984405..985262	+	285	161618972	-	BCAN_A1035	-	ABC transporter related
982	 55.62	0	985266..986261	+	331	161618973	-	BCAN_A1036	-	hypothetical protein
983	 55.72	0	986285..986887	+	200	161618974	-	BCAN_A1037	-	hypothetical protein
984	 59.63	0	987127..991800	-	1557	161618975	-	BCAN_A1038	-	hypothetical protein
985	 44.85	-2	992015..992179	+	54	161618976	-	BCAN_A1039	-	hypothetical protein
986	 60.49	0	992415..992738	+	107	161618977	-	BCAN_A1040	-	ferredoxin-6
987	 55.26	0	993036..993377	+	113	161618978	-	BCAN_A1041	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
988	 57.17	0	993382..994002	-	206	161618979	-	BCAN_A1042	-	hypothetical protein
989	 57.98	0	994160..994999	+	279	161618980	folP	BCAN_A1043	-	dihydropteroate synthase
990	 53.06	0	995018..995377	+	119	161618981	folB	BCAN_A1044	-	dihydroneopterin aldolase
991	 59.36	0	995374..995907	+	177	161618982	folK	BCAN_A1045	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
992	 56.81	0	996022..996579	-	185	161618983	-	BCAN_A1046	-	hypothetical protein
993	 59.40	0	996831..997904	-	357	161618984	-	BCAN_A1047	-	hypothetical protein
994	 58.73	0	997901..999361	-	486	161618985	-	BCAN_A1048	-	protein of unknown function DUF463 YcjX family protein
995	 54.09	0	999454..999954	-	166	161618986	-	BCAN_A1049	-	phosphohistidine phosphatase, SixA
996	 52.04	-1	1000351..1000767	+	138	161618987	dksA	BCAN_A1050	-	RNA polymerase-binding protein DksA
997	 60.50	0	1000936..1002168	-	410	161618988	-	BCAN_A1051	-	basic proline-rich protein precursor
998	 58.58	0	1002535..1005231	+	898	161618989	-	BCAN_A1052	-	PAS domain-containing protein
999	 57.40	0	1005256..1006464	+	402	161618990	-	BCAN_A1053	-	hypothetical protein
1000	 55.63	0	1006495..1007817	+	440	161618991	-	BCAN_A1054	-	beta-lactamase
1001	 57.47	0	1009124..1012918	-	1264	161618992	-	BCAN_A1056	-	ribonucleotide-diphosphate reductase subunit alpha
1002	 46.67	-2	1012971..1013210	+	79	161618993	-	BCAN_A1057	-	hypothetical protein
1003	 59.51	0	1013620..1014108	-	162	161618994	-	BCAN_A1058	-	diphosphoinositol polyphosphate phosphohydrolase 3 beta
1004	 43.70	-2	1014205..1014339	-	44	161618995	-	BCAN_A1059	-	hypothetical protein
1005	 58.03	0	1014350..1014847	-	165	161618996	gpt	BCAN_A1060	-	xanthine-guanine phosphoribosyltransferase
1006	 59.34	0	1015297..1016142	-	281	161618997	-	BCAN_A1061	-	UspA domain-containing protein
1007	 57.44	0	1016220..1016978	-	252	161618998	-	BCAN_A1062	-	molybdopterin binding domain-containing protein
1008	 59.17	0	1017139..1017738	+	199	161618999	wrbA	BCAN_A1063	-	TrpR binding protein WrbA
1009	 50.67	-1	1017716..1017865	-	49	161619000	-	BCAN_A1064	-	hypothetical protein
1010	 54.13	0	1018040..1019299	+	419	161619001	ilvA	BCAN_A1066	-	threonine dehydratase
1011	 62.19	+1	1019366..1020973	+	535	161619002	-	BCAN_A1067	-	DEAD/DEAH box helicase domain-containing protein
1012	 58.02	0	1021144..1022172	+	342	161619003	-	BCAN_A1068	-	cysteine synthase A
1013	 55.91	0	1022175..1022918	+	247	161619004	alaS	BCAN_A1069	-	alanyl-tRNA synthetase
1014	 58.13	0	1022945..1023799	+	284	161619005	-	BCAN_A1070	-	3-mercaptopyruvate sulfurtransferase
1015	 55.36	0	1023801..1024322	+	173	161619006	-	BCAN_A1071	-	GCN5-related N-acetyltransferase
1016	 56.35	0	1024361..1025155	-	264	161619007	-	BCAN_A1072	-	diguanylate cyclase
1017	 55.33	0	1025720..1027210	-	496	161619008	-	BCAN_A1073	-	Acetyl-CoA hydrolase
1018	 56.61	0	1027475..1029016	-	513	161619009	-	BCAN_A1074	-	EmrB/QacA family drug resistance transporter
1019	 57.67	0	1029016..1030116	-	366	161619010	-	BCAN_A1075	-	HlyD family protein secretion protein
1020	 62.20	+1	1030510..1031493	+	327	161619011	-	BCAN_A1076	-	zinc-binding alcohol dehydrogenase family protein
1021	 58.44	0	1031537..1032679	-	380	161619012	pepQ	BCAN_A1077	-	Xaa-Pro dipeptidase
1022	 55.84	0	1032938..1033768	-	276	161619013	-	BCAN_A1078	-	methyltransferase type 12
1023	 55.28	0	1033877..1034842	-	321	161619014	-	BCAN_A1079	-	Sodium/bile acid cotransporter 7-B
1024	 51.63	-1	1034870..1035022	-	50	161619015	-	BCAN_A1080	-	hypothetical protein
1025	 53.97	0	1034971..1035978	-	335	161619016	galE	BCAN_A1081	-	UDP-glucose 4-epimerase
1026	 53.94	0	1036123..1036947	+	274	161619017	-	BCAN_A1082	-	nucleoside triphosphate pyrophosphohydrolase
1027	 56.05	0	1036956..1037567	-	203	161619018	-	BCAN_A1083	-	hypothetical protein
1028	 58.29	0	1037610..1038194	-	194	161619019	-	BCAN_A1084	-	nitroreductase
1029	 57.47	0	1038414..1039424	+	336	161619020	-	BCAN_A1085	-	hypothetical protein
1030	 56.55	0	1039479..1041455	-	658	161619021	thrS	BCAN_A1086	-	threonyl-tRNA synthetase
1031	 57.91	0	1041670..1042902	-	410	161619022	-	BCAN_A1087	-	Serine-type D-Ala-D-Ala carboxypeptidase
1032	 59.79	0	1043009..1043488	-	159	161619023	-	BCAN_A1088	-	hypothetical protein
1033	 57.37	0	1043382..1043822	-	146	161619024	-	BCAN_A1089	-	NifU domain-containing protein
1034	 57.01	0	1044086..1044727	+	213	161619025	folE	BCAN_A1090	-	GTP cyclohydrolase I
1035	 57.14	0	1044750..1045169	+	139	161619026	hisI	BCAN_A1091	-	phosphoribosyl-AMP cyclohydrolase
1036	 59.28	0	1045386..1046333	+	315	161619027	-	BCAN_A1092	-	patatin
1037	 40.00	-2	1046420..1046599	+	59	161619028	-	BCAN_A1093	-	hypothetical protein
1038	 53.98	0	1046808..1048052	+	414	161619029	-	BCAN_A1095	-	site-specific recombinase, phage integrase family protein
1039	 53.33	0	1048191..1048595	+	134	161619030	-	BCAN_A1096	-	hypothetical protein
1040	 54.79	0	1050279..1051676	-	465	161619031	-	BCAN_A1097	-	hypothetical protein
1041	 58.25	0	1052201..1052830	-	209	161619032	cin	BCAN_A1098	-	DNA-invertase
1042	 52.63	-1	1053273..1053386	-	37	161619033	-	BCAN_A1099	-	hypothetical protein
1043	 55.03	0	1053945..1054520	-	191	161619034	-	BCAN_A1100	-	BRO domain-containing protein
1044	 56.81	0	1055047..1056192	-	381	161619035	-	BCAN_A1102	-	acyl-CoA transferase
1045	 56.88	0	1056271..1057455	-	394	161619036	acdA	BCAN_A1103	-	Acyl-CoA dehydrogenase
1046	 58.63	0	1057557..1058489	+	310	161619037	-	BCAN_A1104	-	LysR family transcriptional regulator
1047	 59.15	0	1058459..1059442	-	327	161619038	-	BCAN_A1105	-	luciferase family protein
1048	 57.22	0	1059523..1062612	-	1029	161619039	-	BCAN_A1106	-	acriflavin resistance protein
1049	 57.45	0	1062622..1063803	-	393	161619040	-	BCAN_A1107	-	RND family efflux transporter MFP subunit
1050	 54.32	0	1063911..1064477	+	188	161619041	-	BCAN_A1108	-	TetR family transcriptional regulator
1051	 58.91	0	1064514..1065647	-	377	161619042	tgt	BCAN_A1109	-	queuine tRNA-ribosyltransferase
1052	 58.42	0	1065644..1066735	-	363	161619043	queA	BCAN_A1110	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
1053	 59.57	0	1066857..1067363	-	168	161619044	-	BCAN_A1111	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
1054	 56.01	0	1067426..1068016	-	196	161619045	-	BCAN_A1112	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
1055	 55.56	0	1068037..1068531	-	164	161619046	coaD	BCAN_A1113	-	phosphopantetheine adenylyltransferase
1056	 47.93	-2	1068268..1068726	+	152	161619047	-	BCAN_A1114	-	hypothetical protein
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.