IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
719	 21.54	-2	798995..799435	-	146	119953525	-	BT0748	-	hypothetical protein
720	 30.32	0	799487..801148	+	553	119953526	-	BT0749	-	hypothetical protein
721	 27.42	0	801658..802722	-	354	119953527	-	BT0751	-	N-acetylglucosamine-6-phosphate deacetylase
722	 27.61	0	802682..804184	-	500	119953528	-	BT0752	-	hypothetical protein
723	 27.35	0	804192..804926	-	244	119953529	-	BT0753	-	ABC transporter permease protein
724	 27.51	0	804923..805849	-	308	119953530	-	BT0754	-	ABC transporter ATP-binding protein
725	 28.75	0	805871..806830	-	319	119953531	-	BT0755	-	metal-dependent hydrolase
726	 29.10	0	807150..808211	-	353	119953532	-	BT0756	-	D-amino acid dehydrogenase small subunit
727	 31.64	0	808463..809053	+	196	119953533	-	BT0757	-	ATP-dependent Clp protease proteolytic subunit
728	 24.84	-1	808995..809759	+	254	119953534	-	BT0758	-	hypothetical protein
729	 26.51	0	809886..810779	-	297	119953624	-	BT0759	-	hypothetical integral membrane protein
730	 28.48	0	810817..811146	-	109	119953535	-	BT0760	-	phage protein
731	 28.15	0	811255..812142	+	295	119953536	-	BT0761	-	cell wall endopeptidase, family M23/M37
732	 31.15	0	812279..813649	-	456	119953537	-	BT0763	-	acetoacetate metabolism regulatory protein AtoC
733	 25.93	0	813642..814802	-	386	119953538	-	BT0764	-	sensor protein HydH
734	 23.95	-1	814802..815845	-	347	119953539	-	BT0765	-	DNA polymerase III subunit gamma/tau
735	 25.36	-1	815856..816344	-	162	119953540	-	BT0766	-	colicin V production protein
736	 29.38	0	816334..817422	-	362	119953541	-	BT0767	-	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
737	 27.04	0	817616..818410	-	264	119953542	-	BT0768	-	pyridoxine kinase
738	 32.55	0	818407..819423	-	338	119953543	-	BT0769	-	O-sialoglycoprotein endopeptidase
739	 24.23	-1	819389..820300	-	303	119953544	-	BT0770	-	cation transport ATPases
740	 29.35	0	820347..821150	-	267	119953545	-	BT0771	-	RNA polymerase sigma factor RpoS
741	 26.02	0	821262..821603	-	113	119953546	-	BT0771A	-	flagellar protein FlgJ
742	 26.86	0	821606..822625	-	339	119953547	-	BT0772	-	flagellar P-ring protein FlgI
743	 23.79	-1	822812..823450	-	212	119953548	-	BT0773	-	hypothetical protein
744	 36.86	+2	823450..824244	-	264	119953549	-	BT0774	-	flagellar basal-body rod protein FlgG
745	 32.98	+1	824257..825117	-	286	119953550	-	BT0775	-	flagellar basal-body rod protein FlgF
746	 32.11	0	825320..825889	+	189	119953551	-	BT0776	-	hypothetical protein
747	 31.14	0	825910..826455	+	181	119953552	-	BT0777	-	adenine phosphoribosyltransferase
748	 32.10	0	826573..826896	+	107	119953553	-	BT0778	-	LSU ribosomal protein L21P
749	 26.73	0	826896..827228	+	110	119953554	-	BT0779	-	hypothetical protein
750	 34.15	+1	827215..827460	+	81	119953555	-	BT0780	-	LSU ribosomal protein L27P
751	 36.28	+1	827483..828466	+	327	119953556	-	BT0781	-	GTP-binding protein CgtA
752	 28.97	0	828552..829124	+	190	119953557	-	BT0782	-	nicotinamide-nucleotide adenylyltransferase
753	 26.16	0	829125..830309	+	394	119953558	-	BT0783	-	hypothetical protein
754	 28.06	0	830275..830634	+	119	119953559	-	BT0784	-	iojap protein family
755	 31.96	0	830734..831024	+	96	119953560	-	BT0785	-	stage V sporulation protein G
756	 31.88	0	831188..831736	+	182	119953561	-	BT0786	-	LSU ribosomal protein L25P
757	 29.28	0	831743..832309	+	188	119953562	-	BT0787	-	peptidyl-tRNA hydrolase
758	 27.12	0	832306..833625	+	439	119953563	-	BT0788	-	tRNA(Ile)-lysidine synthetase TilS
759	 34.59	+1	833622..835529	+	635	119953564	-	BT0789	-	cell division protein FtsH
760	 26.09	0	835551..837041	+	496	119953565	-	BT0790	-	hypothetical protein
761	 30.41	0	837055..838695	+	546	119953566	-	BT0790A	-	protease Do
762	 28.30	0	838661..839833	+	390	119953567	-	BT0791	-	thymidine kinase
763	 24.43	-1	839841..840458	-	205	119953568	-	BT0792	-	hypothetical protein
764	 27.91	0	840490..841098	-	202	119953569	-	BT0793	-	thymidylate kinase
765	 26.48	0	841173..845561	+	1462	119953570	-	BT0794	-	hypothetical cytosolic protein
766	 29.25	0	845581..848028	+	815	119953571	-	BT0795	-	outer membrane protein
767	 27.17	0	848064..848582	+	172	119953572	-	BT0796	-	outer membrane protein
768	 22.94	-1	848603..849112	-	169	119953573	-	BT0796A	-	hypothetical protein
769	 28.65	0	849188..851770	+	860	119953574	-	BT0797	-	DNA mismatch repair protein MutS
770	 28.71	0	851781..852386	+	201	119953575	-	BT0798	-	amidophosphoribosyltransferase family protein
771	 26.62	0	852499..852930	+	143	119953576	-	BT0799	-	hypothetical cytosolic protein
772	 33.06	+1	852902..854389	+	495	119953577	-	BT0800	-	N utilization substance protein A
773	 33.68	+1	854370..856955	+	861	119953578	-	BT0801	-	bacterial protein translation initiation factor 2 (IF-2)
774	 25.07	-1	856968..857342	+	124	119953579	-	BT0802	-	ribosome-binding factor A
775	 29.20	0	857349..858194	+	281	119953580	-	BT0803	-	tRNA pseudouridine synthase B
776	 29.21	0	858502..858768	+	88	119953581	-	BT0804	-	SSU ribosomal protein S15P
777	 35.30	+1	858752..860935	+	727	119953582	-	BT0805	-	polyribonucleotide nucleotidyltransferase
778	 25.89	0	860944..862461	+	505	119953583	-	BT0806	-	hypothetical protein
779	 25.04	-1	862436..863725	+	429	119953584	-	BT0807	-	hypothetical membrane spanning protein
780	 26.97	0	863722..864789	+	355	119953585	-	BT0808	-	hypothetical protein
781	 32.54	0	864808..865935	+	375	119953586	-	BT0809	-	queuine tRNA-ribosyltransferase
782	 26.98	0	865910..867451	+	513	119953587	-	BT0810	-	virulence factor MviN
783	 30.24	0	867448..868869	+	473	119953588	-	BT0811	-	hypothetical protein
784	 27.68	0	868863..870119	-	418	119953590	-	BT0812	-	phosphopantothenate--cysteine ligase
785	 23.08	-1	870095..870289	+	64	119953589	-	BT0813	-	hypothetical protein
786	 25.88	0	870282..871703	+	473	119953591	-	BT0814	-	sodium/pantothenate symporter
787	 27.31	0	871675..872670	+	331	119953592	-	BT0815	-	tRNA pseudouridine synthase A
788	 26.73	0	872639..873592	+	317	119953593	-	BT0816	-	hypothetical protein
789	 28.27	0	873528..874988	+	486	119953594	-	BT0817	-	UDP-N-acetylmuramate--alanine ligase
790	 25.37	-1	875000..875866	+	288	119953595	-	BT0818	-	protein YicC
791	 30.19	0	875863..876402	+	179	119953596	-	BT0819	-	cytidylate kinase
792	 29.80	0	876427..876624	+	65	119953597	-	BT0820	-	hypothetical protein
793	 30.56	0	876611..877513	+	300	119953598	-	BT0821	-	tRNA delta(2)-isopentenylpyrophosphate transferase
794	 23.33	-1	877689..878048	-	119	119953599	-	BT0823	-	hypothetical protein
795	 28.60	0	878127..878675	+	182	119953600	-	BT0824	-	hypothetical protein
796	 28.01	0	878668..879456	-	262	119953601	-	BT0825	-	hypothetical membrane associated protein
797	 21.33	-2	879449..879973	-	174	119953602	-	BT0826	-	hypothetical protein
798	 32.78	+1	880057..881496	-	479	119953603	-	BT0826A	-	PTS system, N-acetylglucosamine-specific IIABC component
799	 27.99	0	881643..884129	-	828	119953604	-	BT0827	-	ATP-dependent protease La
800	 29.08	0	884133..886670	-	845	119953605	-	BT0828	-	DNA topoisomerase I
801	 28.22	0	886746..887978	+	410	119953606	-	BT0829	-	exonuclease SbcD
802	 25.54	-1	887878..890814	+	978	119953607	-	BT0830	-	exonuclease SbcC
803	 31.23	0	890850..891800	+	316	119953608	-	BT0831	-	glucokinase
804	 33.65	+1	891801..892427	+	208	119953609	-	BT0831A	-	copper homeostasis protein CutC
805	 26.78	0	892546..893400	-	284	119953610	-	BT0832	-	hypothetical protein
806	 29.76	0	893388..896522	-	1044	119953611	-	BT0833	-	isoleucyl-tRNA synthetase
807	 26.75	0	896507..898663	-	718	119953612	-	BT0834	-	negative regulator of genetic competence ClpC/MecB
808	 27.89	0	898758..900467	-	569	119953613	-	BT0835	-	phosphoglucomutase
809	 30.17	0	900586..902547	+	653	119953614	-	BT0836	-	excinuclease ABC subunit B
810	 32.35	0	902582..905422	+	946	119953615	-	BT0837	-	excinuclease ABC subunit A
811	 26.60	0	905377..908820	+	1147	119953616	-	BT0838	-	hypothetical membrane associated protein
812	 25.48	-1	908876..909397	-	173	119953617	-	BT0838A	-	transposase
813	 28.43	0	909424..910014	-	196	119953618	-	BT0839	-	hypothetical protein
814	 28.56	0	910021..911613	-	530	119953619	-	BT0840	-	hypothetical protein
815	 33.33	+1	911769..912998	+	409	119953620	-	BT0841	-	arginine deiminase
816	 35.11	+1	913003..914013	+	336	119953621	-	BT0842	-	ornithine carbamoyltransferase
817	 34.39	+1	914064..915479	+	471	119953622	-	BT0843	-	arginine/ornithine antiporter
818	 36.37	+2	915443..916429	+	328	119953623	-	BT0843A	-	carbamate kinase
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.