IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
673	 29.37	0	743689..744243	+	184	119953479	-	BT0701	-	hypothetical protein
674	 27.91	0	744246..744743	+	165	119953480	-	BT0702	-	phosphopantetheine adenylyltransferase
675	 34.97	+1	744795..744977	+	60	119953481	-	BT0703	-	LSU ribosomal protein L32P
676	 32.95	+1	744979..745242	+	87	119953482	-	BT0704	-	acyl carrier protein
677	 30.75	0	745248..745982	+	244	119953483	-	BT0705	-	ribonuclease III
678	 24.02	-1	745954..747177	-	407	119953484	-	BT0706	-	poly(A) polymerase
679	 25.14	-1	747264..749069	+	601	119953485	-	BT0707	-	hypothetical protein
680	 20.56	-2	749076..749396	+	106	119953486	-	BT0708	-	hypothetical protein
681	 29.37	0	749859..750893	+	344	119953487	-	BT0709	-	hypothetical protein
682	 28.66	0	750900..752675	+	591	119953488	-	BT0710	-	DNA primase
683	 32.33	0	752668..754560	+	630	119953489	-	BT0712	-	RNA polymerase sigma factor RpoD
684	 31.23	0	754573..755331	+	252	119953490	-	BT0713	-	Zn-ribbon protein
685	 25.36	-1	755729..756694	+	321	119953491	-	BT0714	-	tetratricopeptide repeat family protein
686	 36.00	+1	756707..757756	+	349	119953492	-	BT0715	-	rod shape-determining protein MreB
687	 28.72	0	757759..758604	+	281	119953493	-	BT0716	-	rod shape-determining protein MreC
688	 19.25	-2	758601..759083	+	160	119953494	-	BT0717	-	rod shape-determining protein MreD
689	 32.00	0	759085..760887	+	600	119953495	-	BT0718	-	cell elongation specific D,D-transpeptidase
690	 27.05	0	760893..762212	+	439	119953496	-	BT0719	-	rod shape-determining protein RodA
691	 33.16	+1	762367..764118	+	583	119953497	-	BT0720	-	threonyl-tRNA synthetase
692	 22.92	-1	764120..764743	+	207	119953498	-	BT0721	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
693	 26.33	0	764733..766175	+	480	119953499	-	BT0722	-	hypothetical protein
694	 19.62	-2	766152..766676	-	174	119953500	-	BT0723	-	adenylate cyclase
695	 30.84	0	766761..768086	+	441	119953501	-	BT0724	-	potassium uptake protein KtrB
696	 29.63	0	768093..768875	+	260	119953502	-	BT0725	-	potassium uptake protein KtrA
697	 29.12	0	768888..769859	+	323	119953503	-	BT0726	-	ATP-binding protein
698	 33.33	+1	769899..771248	+	449	119953504	-	BT0727	-	pyrophosphate--fructose 6-phosphate 1-phosphotransferase
699	 32.13	0	771264..772595	-	443	119953505	-	BT0728	-	NADH dehydrogenase
700	 32.83	+1	772605..773993	-	462	119953506	-	BT0729	-	sodium:dicarboxylate symporter family protein YhcL
701	 30.36	0	774075..775655	-	526	119953507	-	BT0730	-	glucose-6-phosphate isomerase
702	 23.46	-1	775684..776088	-	134	119953508	-	BT0731	-	chromosome partitioning protein ParB
703	 31.57	0	776094..778868	-	924	119953509	-	BT0732	-	multimodular transpeptidase-transglycosylase PBP 1A
704	 30.53	0	779268..780053	+	261	119953510	-	BT0733	-	hypothetical protein
705	 29.94	0	780037..781155	+	372	119953511	-	BT0733A	-	tetratricopeptide repeat family protein
706	 32.44	0	781173..782183	-	336	119953512	-	BT0734	-	Sua5/YciO/YrdC/YwlC family protein
707	 30.59	0	782292..783092	+	266	119953513	-	BT0735	-	rare lipoprotein A
708	 25.51	-1	783082..785139	-	685	119953514	-	BT0735A	-	ATP-dependent helicase, DinG family
709	 29.42	0	785515..786510	+	331	119953515	-	BT0737	-	histidine phosphokinase/phophatase, putative
710	 31.24	0	786510..789134	+	874	119953516	-	BT0738	-	valyl-tRNA synthetase
711	 26.25	0	789268..789945	-	225	119953517	-	BT0740	-	tRNA (5-aminomethyl-2-thiouridylate) methyltransferase
712	 29.75	0	790161..790439	-	92	119953518	-	BT0741	-	10 kDa chaperonin GroES
713	 32.90	+1	790577..792208	+	543	119953519	-	BT0742	-	ABC transporter ATP-binding protein
714	 29.05	0	792213..793916	+	567	119953520	-	BT0743	-	hypothetical membrane spanning protein
715	 30.94	0	794047..796176	+	709	119953521	-	BT0744	-	p93 antigen
716	 27.17	0	796457..797137	+	226	119953522	-	BT0745	-	endonuclease III
717	 27.70	0	797146..797997	-	283	119953523	-	BT0746	-	oligopeptide transport system permease protein OppC
718	 25.87	0	797997..798947	-	316	119953524	-	BT0747	-	oligopeptide transport system permease protein OppB
719	 21.54	-2	798995..799435	-	146	119953525	-	BT0748	-	hypothetical protein
720	 30.32	0	799487..801148	+	553	119953526	-	BT0749	-	hypothetical protein
721	 27.42	0	801658..802722	-	354	119953527	-	BT0751	-	N-acetylglucosamine-6-phosphate deacetylase
722	 27.61	0	802682..804184	-	500	119953528	-	BT0752	-	hypothetical protein
723	 27.35	0	804192..804926	-	244	119953529	-	BT0753	-	ABC transporter permease protein
724	 27.51	0	804923..805849	-	308	119953530	-	BT0754	-	ABC transporter ATP-binding protein
725	 28.75	0	805871..806830	-	319	119953531	-	BT0755	-	metal-dependent hydrolase
726	 29.10	0	807150..808211	-	353	119953532	-	BT0756	-	D-amino acid dehydrogenase small subunit
727	 31.64	0	808463..809053	+	196	119953533	-	BT0757	-	ATP-dependent Clp protease proteolytic subunit
728	 24.84	-1	808995..809759	+	254	119953534	-	BT0758	-	hypothetical protein
729	 26.51	0	809886..810779	-	297	119953624	-	BT0759	-	hypothetical integral membrane protein
730	 28.48	0	810817..811146	-	109	119953535	-	BT0760	-	phage protein
731	 28.15	0	811255..812142	+	295	119953536	-	BT0761	-	cell wall endopeptidase, family M23/M37
732	 31.15	0	812279..813649	-	456	119953537	-	BT0763	-	acetoacetate metabolism regulatory protein AtoC
733	 25.93	0	813642..814802	-	386	119953538	-	BT0764	-	sensor protein HydH
734	 23.95	-1	814802..815845	-	347	119953539	-	BT0765	-	DNA polymerase III subunit gamma/tau
735	 25.36	-1	815856..816344	-	162	119953540	-	BT0766	-	colicin V production protein
736	 29.38	0	816334..817422	-	362	119953541	-	BT0767	-	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
737	 27.04	0	817616..818410	-	264	119953542	-	BT0768	-	pyridoxine kinase
738	 32.55	0	818407..819423	-	338	119953543	-	BT0769	-	O-sialoglycoprotein endopeptidase
739	 24.23	-1	819389..820300	-	303	119953544	-	BT0770	-	cation transport ATPases
740	 29.35	0	820347..821150	-	267	119953545	-	BT0771	-	RNA polymerase sigma factor RpoS
741	 26.02	0	821262..821603	-	113	119953546	-	BT0771A	-	flagellar protein FlgJ
742	 26.86	0	821606..822625	-	339	119953547	-	BT0772	-	flagellar P-ring protein FlgI
743	 23.79	-1	822812..823450	-	212	119953548	-	BT0773	-	hypothetical protein
744	 36.86	+2	823450..824244	-	264	119953549	-	BT0774	-	flagellar basal-body rod protein FlgG
745	 32.98	+1	824257..825117	-	286	119953550	-	BT0775	-	flagellar basal-body rod protein FlgF
746	 32.11	0	825320..825889	+	189	119953551	-	BT0776	-	hypothetical protein
747	 31.14	0	825910..826455	+	181	119953552	-	BT0777	-	adenine phosphoribosyltransferase
748	 32.10	0	826573..826896	+	107	119953553	-	BT0778	-	LSU ribosomal protein L21P
749	 26.73	0	826896..827228	+	110	119953554	-	BT0779	-	hypothetical protein
750	 34.15	+1	827215..827460	+	81	119953555	-	BT0780	-	LSU ribosomal protein L27P
751	 36.28	+1	827483..828466	+	327	119953556	-	BT0781	-	GTP-binding protein CgtA
752	 28.97	0	828552..829124	+	190	119953557	-	BT0782	-	nicotinamide-nucleotide adenylyltransferase
753	 26.16	0	829125..830309	+	394	119953558	-	BT0783	-	hypothetical protein
754	 28.06	0	830275..830634	+	119	119953559	-	BT0784	-	iojap protein family
755	 31.96	0	830734..831024	+	96	119953560	-	BT0785	-	stage V sporulation protein G
756	 31.88	0	831188..831736	+	182	119953561	-	BT0786	-	LSU ribosomal protein L25P
757	 29.28	0	831743..832309	+	188	119953562	-	BT0787	-	peptidyl-tRNA hydrolase
758	 27.12	0	832306..833625	+	439	119953563	-	BT0788	-	tRNA(Ile)-lysidine synthetase TilS
759	 34.59	+1	833622..835529	+	635	119953564	-	BT0789	-	cell division protein FtsH
760	 26.09	0	835551..837041	+	496	119953565	-	BT0790	-	hypothetical protein
761	 30.41	0	837055..838695	+	546	119953566	-	BT0790A	-	protease Do
762	 28.30	0	838661..839833	+	390	119953567	-	BT0791	-	thymidine kinase
763	 24.43	-1	839841..840458	-	205	119953568	-	BT0792	-	hypothetical protein
764	 27.91	0	840490..841098	-	202	119953569	-	BT0793	-	thymidylate kinase
765	 26.48	0	841173..845561	+	1462	119953570	-	BT0794	-	hypothetical cytosolic protein
766	 29.25	0	845581..848028	+	815	119953571	-	BT0795	-	outer membrane protein
767	 27.17	0	848064..848582	+	172	119953572	-	BT0796	-	outer membrane protein
768	 22.94	-1	848603..849112	-	169	119953573	-	BT0796A	-	hypothetical protein
769	 28.65	0	849188..851770	+	860	119953574	-	BT0797	-	DNA mismatch repair protein MutS
770	 28.71	0	851781..852386	+	201	119953575	-	BT0798	-	amidophosphoribosyltransferase family protein
771	 26.62	0	852499..852930	+	143	119953576	-	BT0799	-	hypothetical cytosolic protein
772	 33.06	+1	852902..854389	+	495	119953577	-	BT0800	-	N utilization substance protein A
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.