IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
526	 24.46	-1	562597..563193	-	198	119953332	-	BT0547	-	dephospho-CoA kinase
527	 28.22	0	563172..565931	-	919	119953333	-	BT0548	-	DNA polymerase I
528	 23.06	-1	565928..566326	-	132	119953334	-	BT0549	-	hypothetical protein
529	 25.95	0	566316..566735	-	139	119953335	-	BT0550	-	flagellar protein FliS
530	 30.64	0	566746..567153	-	135	119953336	-	BT0551	-	chemotaxis protein CheY
531	 29.59	0	567318..569348	+	676	119953337	-	BT0552	-	NAD-dependent DNA ligase
532	 24.43	-1	569351..571483	-	710	119953338	-	BT0553	-	myosin family protein
533	 26.15	0	571758..573623	+	621	119953339	-	BT0554	-	hypothetical protein
534	 26.19	0	573610..574071	+	153	119953340	-	BT0555	-	hypothetical protein
535	 22.57	-1	574068..574931	+	287	119953341	-	BT0556	-	hypothetical protein
536	 34.87	+1	575092..575352	+	86	119953342	-	BT0557	-	phosphocarrier protein HPr
537	 32.58	0	575368..577089	+	573	119953343	-	BT0558	-	phosphoenolpyruvate-protein phosphotransferase
538	 35.79	+1	577093..577662	+	189	119953344	-	BT0559	-	PTS system, glucose-specific IIA component
539	 28.95	0	577696..579543	-	615	119953345	-	BT0560	-	chaperone protein HtpG
540	 30.39	0	579664..581058	+	464	119953346	-	BT0561	-	6-phosphogluconate dehydrogenase
541	 28.70	0	581073..581612	-	179	119953347	-	BT0562	-	hypothetical protein
542	 32.36	0	581742..582257	-	171	119953348	-	BT0562A	-	hypothetical protein
543	 34.50	+1	582650..583165	-	171	119953349	-	BT0563	-	hypothetical protein
544	 28.86	0	583650..584186	+	178	119953350	-	BT0565	-	chemotaxis protein CheW
545	 25.32	-1	584201..584512	+	103	119953351	-	BT0566	-	hypothetical protein with NTP binding domain
546	 32.27	0	584536..586689	+	717	119953352	-	BT0567	-	chemotaxis protein CheA
547	 30.82	0	586738..587889	+	383	119953353	-	BT0568	-	protein-glutamate methylesterase
548	 27.19	0	587889..589661	+	590	119953354	-	BT0569	-	hypothetical protein
549	 37.33	+2	589699..590073	+	124	119953355	-	BT0570	-	chemotaxis protein CheY
550	 30.55	0	590099..591463	+	454	119953356	-	BT0570A	-	Xaa-His dipeptidase
551	 28.99	0	591688..592377	-	229	119953357	-	BT0571	-	uridylate kinase
552	 27.67	0	592586..593662	+	358	119953358	-	BT0572	-	SS-1,4-galactosyltransferase
553	 26.86	0	593724..594542	+	272	119953359	-	BT0573	-	ABC transporter ATP-binding protein
554	 21.21	-2	594535..595392	+	285	119953360	-	BT0574	-	ABC transporter permease protein
555	 32.59	0	595679..597289	+	536	119953361	-	BT0575	-	CTP synthase
556	 27.55	0	597391..597978	+	195	119953362	-	BT0577	-	hypothetical protein
557	 29.10	0	598175..599356	+	393	119953363	-	BT0578	-	methyl-accepting chemotaxis protein
558	 31.94	0	599501..602953	+	1150	119953364	-	BT0579	-	DNA polymerase III alpha subunit
559	 27.40	0	602965..603537	+	190	119953365	-	BT0580	-	integral membrane protein, YggT family
560	 29.61	0	603541..605610	+	689	119953366	-	BT0581	-	ATP-dependent DNA helicase RecG
561	 26.29	0	605613..606407	-	264	119953367	-	BT0582	-	D-alanyl-D-alanine carboxypeptidase
562	 28.52	0	606494..607843	+	449	119953368	-	BT0583	-	Na+ driven multidrug efflux pump
563	 27.90	0	608027..609370	+	447	119953369	-	BT0584	-	Na+ driven multidrug efflux pump
564	 28.32	0	609395..610750	+	451	119953370	-	BT0585	-	UDP-N-acetylmuramoylalanine--D-glutamate ligase
565	 27.24	0	610747..611796	-	349	119953371	-	BT0586	-	N-acetylmuramoylpentapeptide-ornithine N(5)-glycyltransferase
566	 29.85	0	611818..613998	-	726	119953372	-	BT0587	-	methionyl-tRNA synthetase
567	 34.57	+1	614125..615171	+	348	119953373	-	BT0589	-	phosphate acetyltransferase
568	 28.32	0	615142..615978	-	278	119953374	-	BT0590	-	dimethyladenosine transferase
569	 24.57	-1	616006..617283	-	425	119953375	-	BT0591	-	COME operon protein 3
570	 24.54	-1	617398..618102	+	234	119953376	-	BT0592	-	CAAX amino terminal protease family
571	 30.90	0	618116..620047	+	643	119953377	-	BT0593	-	long-chain-fatty-acid--CoA ligase
572	 28.03	0	620078..621832	-	584	119953378	-	BT0594	-	arginyl-tRNA synthetase
573	 24.24	-1	621822..622415	-	197	119953379	-	BT0595	-	hypothetical protein
574	 27.86	0	622431..624659	-	742	119953380	-	BT0596	-	methyl-accepting chemotaxis protein
575	 26.69	0	624857..627055	+	732	119953381	-	BT0597	-	methyl-accepting chemotaxis protein
576	 29.52	0	627057..627974	-	305	119953382	-	BT0598	-	UDP-N-acetylenolpyruvoylglucosamine reductase
577	 29.81	0	628182..629627	+	481	119953383	-	BT0599	-	cysteinyl-tRNA synthetase
578	 25.66	-1	629631..631181	+	516	119953384	-	BT0600	-	hypothetical protein
579	 34.13	+1	631171..632424	+	417	119953385	-	BT0601	-	serine hydroxymethyltransferase
580	 27.20	0	632451..633200	+	249	119953386	-	BT0602	-	DnaJ-like protein DjlA
581	 34.06	+1	633305..635098	-	597	119953387	-	BT0603	-	p66 protein precursor
582	 34.18	+1	635298..636833	-	511	119953388	-	BT0604	-	L-lactate permease
583	 28.75	0	636885..637823	+	312	119953389	-	BT0605	-	D-alanyl-D-alanine carboxypeptidase
584	 32.93	+1	638079..638570	+	163	119953390	-	BT0606	-	chemotaxis protein CheD
585	 31.65	0	638846..640267	+	473	119953391	-	BT0608	-	aminoacyl-histidine dipeptidase
586	 28.51	0	640798..642144	+	448	119953392	-	BT0610	-	trigger factor, ppiase
587	 33.83	+1	642144..642743	+	199	119953393	-	BT0611	-	ATP-dependent Clp protease proteolytic subunit
588	 33.10	+1	642749..644056	+	435	119953394	-	BT0612	-	ATP-dependent Clp protease ATP-binding subunit ClpX
589	 30.13	0	644001..646436	+	811	119953395	-	BT0613	-	ATP-dependent protease La
590	 32.70	0	646652..647278	-	208	119953396	-	BT0615	-	SSU ribosomal protein S4P
591	 25.02	-1	647428..648726	-	432	119953397	-	BT0616	-	cation efflux family protein
592	 27.34	0	648827..649210	+	127	119953398	-	BT0617	-	hypothetical protein
593	 29.82	0	649244..649699	-	151	119953399	-	BT0618	-	cytidine deaminase
594	 30.31	0	649830..650789	+	319	119953400	-	BT0619	-	phosphoesterase, DHH family protein
595	 27.90	0	650779..652434	-	551	119953401	-	BT0620	-	beta-hexosaminidase
596	 32.97	+1	652860..653405	+	181	119953402	-	BT0621	-	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme
597	 29.05	0	653552..654766	-	404	119953403	-	BT0622	-	acetate kinase
598	 27.72	0	654783..658151	-	1122	119953404	-	BT0623	-	transcription-repair coupling factor
599	 27.83	0	658249..659211	+	320	119953405	-	BT0624	-	hypothetical protein
600	 30.43	0	659147..661216	+	689	119953406	-	BT0625	-	autolysin
601	 31.13	0	661908..663176	-	422	119953407	-	BT0627	-	probable M18-family aminopeptidase 2
602	 29.61	0	663276..664001	+	241	119953408	-	BT0628	-	hypothetical protein
603	 34.36	+1	664035..665882	-	615	119953409	-	BT0629	-	PTS system, fructose-specific IIABC component
604	 33.22	+1	666013..666921	+	302	119953410	-	BT0630	-	1-phosphofructokinase
605	 25.18	-1	667205..669031	-	608	119953411	-	BT0632	-	exodeoxyribonuclease V alpha chain
606	 24.39	-1	669041..672484	-	1147	119953412	-	BT0633	-	exodeoxyribonuclease V beta chain
607	 24.22	-1	672495..675719	-	1074	119953413	-	BT0634	-	exodeoxyribonuclease V gamma chain
608	 29.25	0	675735..677180	-	481	119953414	-	BT0635	-	nicotinate phosphoribosyltransferase
609	 29.50	0	677376..678809	+	477	119953415	-	BT0636	-	glucose-6-phosphate 1-dehydrogenase
610	 32.89	+1	679989..681329	+	446	119953416	-	BT0638	-	Na+/H+ antiporter NhaC
611	 28.67	0	681373..682422	-	349	119953417	-	BT0639	-	spermidine/putrescine-binding protein
612	 26.77	0	682440..683231	-	263	119953418	-	BT0640	-	spermidine/putrescine transport system permease protein PotC
613	 28.68	0	683247..684062	-	271	119953419	-	BT0641	-	spermidine/putrescine transport system permease protein PotB
614	 30.46	0	684050..685093	-	347	119953420	-	BT0642	-	spermidine/putrescine transport ATP-binding protein PotA
615	 25.16	-1	685165..686082	-	305	119953421	-	BT0643	-	GTP-binding protein
616	 33.97	+1	686252..686881	+	209	119953422	-	BT0644	-	N-acetylmannosamine-6-phosphate 2-epimerase
617	 33.33	+1	686922..688466	+	514	119953423	-	BT0645	-	PTS system, glucose-specific IIBC component
618	 30.38	0	688508..689524	-	338	119953424	-	BT0646	-	carboxylesterase
619	 27.36	0	689505..690023	-	172	119953425	-	BT0647	-	oxidative stress response regulator BosR
620	 23.88	-1	690115..691806	-	563	119953426	-	BT0648	-	serine/threonine kinase, putative
621	 35.66	+1	692025..693659	+	544	119953427	-	BT0649	-	60 kDa chaperonin GroEL
622	 31.65	0	693718..694014	+	98	119953428	-	BT0650	-	hypothetical protein
623	 28.09	0	694015..694338	+	107	119953429	-	BT0651	-	protein translocase subunit YajC
624	 31.19	0	694420..696192	+	590	119953430	-	BT0652	-	protein translocase subunit SecD
625	 25.22	-1	696176..697075	+	299	119953431	-	BT0653	-	protein translocase subunit SecF
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.