IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
462	 30.64	0	499874..500542	+	222	119953268	-	BT0479	-	LSU ribosomal protein L1E
463	 29.97	0	500564..500860	+	98	119953269	-	BT0480	-	LSU ribosomal protein L23P
464	 38.62	+2	500860..501711	+	283	119953270	-	BT0481	-	LSU ribosomal protein L2P
465	 35.48	+1	501721..501999	+	92	119953271	-	BT0482	-	SSU ribosomal protein S19P
466	 37.47	+2	502005..502367	+	120	119953272	-	BT0483	-	LSU ribosomal protein L22P
467	 30.57	0	502371..503201	+	276	119953273	-	BT0484	-	SSU ribosomal protein S3P
468	 42.93	+2	503221..503637	+	138	119953274	-	BT0485	-	LSU ribosomal protein L16P
469	 30.35	0	503641..503841	+	66	119953275	-	BT0486	-	LSU ribosomal protein L29P
470	 32.55	0	503847..504101	+	84	119953276	-	BT0487	-	SSU ribosomal protein S17P
471	 39.02	+2	504132..504500	+	122	119953277	-	BT0488	-	LSU ribosomal protein L14P
472	 32.35	0	504511..504816	+	101	119953278	-	BT0489	-	LSU ribosomal protein L24P
473	 32.97	+1	504820..505368	+	182	119953279	-	BT0490	-	LSU ribosomal protein L5P
474	 36.56	+2	505383..505568	+	61	119953280	-	BT0491	-	SSU ribosomal protein S14P
475	 31.33	0	505578..505976	+	132	119953281	-	BT0492	-	SSU ribosomal protein S8P
476	 34.07	+1	505996..506538	+	180	119953282	-	BT0493	-	LSU ribosomal protein L6P
477	 29.72	0	506556..506915	+	119	119953283	-	BT0494	-	LSU ribosomal protein L18P
478	 36.97	+2	506927..507421	+	164	119953284	-	BT0495	-	SSU ribosomal protein S5P
479	 29.81	0	507425..507736	+	103	119953285	-	BT0496	-	LSU ribosomal protein L30P
480	 35.16	+1	507729..508166	+	145	119953286	-	BT0497	-	LSU ribosomal protein L15P
481	 30.57	0	508179..509483	+	434	119953287	-	BT0498	-	protein translocase subunit SecY
482	 24.56	-1	509493..509606	+	37	119953288	-	BT0499	-	LSU ribosomal protein L36P
483	 33.86	+1	509616..509993	+	125	119953289	-	BT0500	-	SSU ribosomal protein S13P
484	 35.64	+1	510024..510413	+	129	119953290	-	BT0501	-	SSU ribosomal protein S11P
485	 31.40	0	510426..511460	+	344	119953291	-	BT0502	-	DNA-directed RNA polymerase alpha chain
486	 30.93	0	511479..511853	+	124	119953292	-	BT0503	-	LSU ribosomal protein L17P
487	 32.75	0	511925..513466	+	513	119953293	-	BT0504	-	hydrolase (HAD superfamily)
488	 30.87	0	513435..514247	+	270	119953294	-	BT0505	-	hypothetical protein
489	 27.65	0	514228..515019	+	263	119953295	-	BT0506	-	putative cell adhesion protein
490	 23.45	-1	515016..515774	-	252	119953296	-	BT0507	-	germination protein GerM
491	 28.93	0	515861..517177	+	438	119953297	-	BT0508	-	GTP-binding protein
492	 27.62	0	517174..518433	+	419	119953298	-	BT0509	-	hypothetical protein
493	 26.78	0	518443..519129	+	228	119953299	-	BT0511	-	phosphocarrier protein HPr-phosphatase
494	 28.95	0	519131..526036	+	2301	119953300	-	BT0512	-	hypothetical membrane associated protein
495	 33.53	+1	526049..527596	+	515	119953301	-	BT0513	-	phenylalanyl-tRNA synthetase alpha chain
496	 30.62	0	527589..529283	+	564	119953302	-	BT0514	-	phenylalanyl-tRNA synthetase beta chain
497	 33.74	+1	529382..530359	+	325	119953303	-	BT0515	-	thioredoxin reductase
498	 26.67	0	530388..531122	-	244	119953304	-	BT0516	-	23S rRNA methyltransferase
499	 32.79	+1	531124..532221	-	365	119953305	-	BT0517	-	chaperone protein DnaJ
500	 36.25	+1	532221..534173	-	650	119953306	-	BT0518	-	chaperone protein DnaK
501	 28.96	0	534154..534702	-	182	119953307	-	BT0519	-	GrpE protein
502	 31.55	0	535253..536821	+	522	119953308	-	BT0522	-	glutamine-dependent NAD(+) synthetase
503	 26.70	0	536814..538397	+	527	119953309	-	BT0522A	-	two-component response regulator
504	 23.68	-1	538523..538957	-	144	119953310	-	BT0525	-	hypothetical protein
505	 27.31	0	539075..540883	+	602	119953311	-	BT0526	-	hypothetical protein
506	 30.04	0	540873..541661	+	262	119953312	-	BT0527	-	Bvg accessory factor
507	 27.26	0	541950..542756	-	268	119953313	-	BT0530	-	hypothetical protein
508	 29.41	0	542743..543354	-	203	119953314	-	BT0531	-	N-acetylmuramoyl-L-alanine amidase
509	 25.10	-1	543357..544643	-	428	119953315	-	BT0532	-	hypothetical protein
510	 30.70	0	545035..545793	+	252	119953316	-	BT0533	-	metal-dependent hydrolase
511	 31.23	0	545813..546571	+	252	119953317	-	BT0534	-	exodeoxyribonuclease III
512	 28.78	0	546598..547344	+	248	119953318	-	BT0535	-	hypothetical protein
513	 28.66	0	547341..550163	+	940	119953319	-	BT0536	-	zinc protease
514	 23.44	-1	550186..551631	-	481	119953320	-	BT0536A	-	hypothetical protein
515	 29.51	0	552072..552725	-	217	119953321	-	BT0537	-	tetratricopeptide repeat family protein
516	 28.06	0	552697..553056	-	119	119953322	-	BT0538	-	hypothetical cytosolic protein
517	 31.03	0	553135..553830	-	231	119953323	-	BT0539	-	integral membrane protein
518	 35.12	+1	553843..555918	-	691	119953324	-	BT0540	-	protein translation elongation factor G (EF-G)
519	 27.98	0	556316..556558	+	80	119953325	-	BT0541	-	hypothetical protein
520	 29.35	0	556737..557816	+	359	119953326	-	BT0541A	-	hypothetical protein
521	 27.32	0	557868..558416	+	182	119953327	-	BT0542	-	tetratricopeptide repeat family protein
522	 30.88	0	558450..559142	+	230	119953328	-	BT0543	-	hypothetical protein
523	 29.89	0	559320..560540	+	406	119953329	-	BT0544	-	ribose-phosphate pyrophosphokinase
524	 29.08	0	560545..561909	+	454	119953330	-	BT0545	-	xylulose kinase
525	 26.81	0	561892..562596	-	234	119953331	-	BT0546	-	hypothetical protein
526	 24.46	-1	562597..563193	-	198	119953332	-	BT0547	-	dephospho-CoA kinase
527	 28.22	0	563172..565931	-	919	119953333	-	BT0548	-	DNA polymerase I
528	 23.06	-1	565928..566326	-	132	119953334	-	BT0549	-	hypothetical protein
529	 25.95	0	566316..566735	-	139	119953335	-	BT0550	-	flagellar protein FliS
530	 30.64	0	566746..567153	-	135	119953336	-	BT0551	-	chemotaxis protein CheY
531	 29.59	0	567318..569348	+	676	119953337	-	BT0552	-	NAD-dependent DNA ligase
532	 24.43	-1	569351..571483	-	710	119953338	-	BT0553	-	myosin family protein
533	 26.15	0	571758..573623	+	621	119953339	-	BT0554	-	hypothetical protein
534	 26.19	0	573610..574071	+	153	119953340	-	BT0555	-	hypothetical protein
535	 22.57	-1	574068..574931	+	287	119953341	-	BT0556	-	hypothetical protein
536	 34.87	+1	575092..575352	+	86	119953342	-	BT0557	-	phosphocarrier protein HPr
537	 32.58	0	575368..577089	+	573	119953343	-	BT0558	-	phosphoenolpyruvate-protein phosphotransferase
538	 35.79	+1	577093..577662	+	189	119953344	-	BT0559	-	PTS system, glucose-specific IIA component
539	 28.95	0	577696..579543	-	615	119953345	-	BT0560	-	chaperone protein HtpG
540	 30.39	0	579664..581058	+	464	119953346	-	BT0561	-	6-phosphogluconate dehydrogenase
541	 28.70	0	581073..581612	-	179	119953347	-	BT0562	-	hypothetical protein
542	 32.36	0	581742..582257	-	171	119953348	-	BT0562A	-	hypothetical protein
543	 34.50	+1	582650..583165	-	171	119953349	-	BT0563	-	hypothetical protein
544	 28.86	0	583650..584186	+	178	119953350	-	BT0565	-	chemotaxis protein CheW
545	 25.32	-1	584201..584512	+	103	119953351	-	BT0566	-	hypothetical protein with NTP binding domain
546	 32.27	0	584536..586689	+	717	119953352	-	BT0567	-	chemotaxis protein CheA
547	 30.82	0	586738..587889	+	383	119953353	-	BT0568	-	protein-glutamate methylesterase
548	 27.19	0	587889..589661	+	590	119953354	-	BT0569	-	hypothetical protein
549	 37.33	+2	589699..590073	+	124	119953355	-	BT0570	-	chemotaxis protein CheY
550	 30.55	0	590099..591463	+	454	119953356	-	BT0570A	-	Xaa-His dipeptidase
551	 28.99	0	591688..592377	-	229	119953357	-	BT0571	-	uridylate kinase
552	 27.67	0	592586..593662	+	358	119953358	-	BT0572	-	SS-1,4-galactosyltransferase
553	 26.86	0	593724..594542	+	272	119953359	-	BT0573	-	ABC transporter ATP-binding protein
554	 21.21	-2	594535..595392	+	285	119953360	-	BT0574	-	ABC transporter permease protein
555	 32.59	0	595679..597289	+	536	119953361	-	BT0575	-	CTP synthase
556	 27.55	0	597391..597978	+	195	119953362	-	BT0577	-	hypothetical protein
557	 29.10	0	598175..599356	+	393	119953363	-	BT0578	-	methyl-accepting chemotaxis protein
558	 31.94	0	599501..602953	+	1150	119953364	-	BT0579	-	DNA polymerase III alpha subunit
559	 27.40	0	602965..603537	+	190	119953365	-	BT0580	-	integral membrane protein, YggT family
560	 29.61	0	603541..605610	+	689	119953366	-	BT0581	-	ATP-dependent DNA helicase RecG
561	 26.29	0	605613..606407	-	264	119953367	-	BT0582	-	D-alanyl-D-alanine carboxypeptidase
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.