IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
412	 29.82	0	449413..449811	-	132	119953218	-	BT0429	-	hypothetical protein
413	 25.73	0	449917..450495	+	192	119953219	-	BT0430	-	Xaa-Pro dipeptidase
414	 24.97	-1	450687..451439	+	250	119953220	-	BT0431	-	Soj protein
415	 23.55	-1	451442..452146	+	234	119953221	-	BT0432	-	hypothetical protein
416	 27.92	0	452139..452951	-	270	119953222	-	BT0434	-	probable chromosome partitioning protein ParB
417	 32.27	0	453056..455503	-	815	119953223	-	BT0435	-	DNA gyrase subunit A
418	 33.44	+1	455500..457419	-	639	119953224	-	BT0436	-	DNA gyrase subunit B
419	 28.04	0	457651..459105	+	484	119953225	-	BT0437	-	chromosomal replication initiator protein DnaA
420	 30.23	0	459346..460506	+	386	119953226	-	BT0438	-	DNA polymerase III, beta chain
421	 28.78	0	460519..461595	+	358	119953227	-	BT0438A	-	DNA replication and repair protein RecF
422	 25.33	-1	461576..461875	+	99	119953228	-	BT0439	-	hypothetical protein
423	 39.10	+2	461966..462121	+	51	119953229	-	BT0440	-	LSU ribosomal protein L34P
424	 27.83	0	462102..462446	+	114	119953230	-	BT0441	-	ribonuclease P protein component
425	 26.74	0	462443..464080	+	545	119953231	-	BT0442	-	60 kDa inner membrane protein YidC
426	 29.60	0	464077..464799	+	240	119953232	-	BT0443	-	Jag protein
427	 30.88	0	464950..466008	+	352	119953233	-	BT0444	-	UDP-glucuronate 4-epimerase
428	 35.46	+1	466129..467208	+	359	119953234	-	BT0445	-	fructose-bisphosphate aldolase
429	 27.49	0	467477..467887	+	136	119953235	-	BT0445A	-	small heat shock protein
430	 29.86	0	467915..469672	-	585	119953236	-	BT0446	-	aspartyl-tRNA synthetase
431	 28.76	0	469676..471796	-	706	119953237	-	BT0447	-	Na(+)/H(+) antiporter
432	 28.37	0	471793..472074	-	93	119953238	-	BT0448	-	phosphocarrier protein HPr
433	 24.58	-1	472089..472385	-	98	119953239	-	BT0449	-	ribosome-associated factor Y
434	 26.02	0	473576..474163	-	195	119953240	-	BT0451	-	chromate transport protein
435	 25.22	-1	474112..474690	-	192	119953241	-	BT0452	-	chromate transport protein
436	 29.64	0	474864..475730	+	288	119953242	-	BT0453	-	mechanosensitive ion channel
437	 26.48	0	475727..476878	-	383	119953243	-	BT0454	-	1,2-diacylglycerol 3-glucosyltransferase
438	 24.75	-1	476938..477927	+	329	119953244	-	BT0455	-	hypothetical cytosolic protein
439	 27.47	0	478027..479835	-	602	119953245	-	BT0457	-	excinuclease ABC subunit C
440	 30.50	0	479953..481470	+	505	119953246	-	BT0458	-	hypothetical protein
441	 27.37	0	481463..482770	+	435	119953247	-	BT0459	-	tetratricopeptide repeat family protein
442	 25.75	0	483112..483810	-	232	119953248	-	BT0460	-	hypothetical protein
443	 30.66	0	484378..486024	+	548	119953249	-	BT0461	-	DNA polymerase III subunit gamma/tau
444	 30.00	0	486031..486330	+	99	119953250	-	BT0462	-	hypothetical protein
445	 32.48	0	486334..486918	+	194	119953251	-	BT0462A	-	recombination protein RecR
446	 32.75	0	487242..487751	+	169	119953252	-	BT0463	-	nucleoside diphosphate kinase
447	 25.12	-1	487726..488577	+	283	119953253	-	BT0463A	-	adenine-specific methyltransferase
448	 27.93	0	488815..489351	+	178	119953254	-	BT0464	-	hypothetical protein
449	 29.76	0	489348..490046	+	232	119953255	-	BT0465	-	hypothetical protein
450	 34.65	+1	489982..490815	+	277	119953256	-	BT0466	-	ABC transporter ATP-binding protein
451	 26.81	0	490812..491501	+	229	119953257	-	BT0467	-	hypothetical cytosolic protein
452	 28.15	0	491401..492249	+	282	119953258	-	BT0468	-	NIF3-related protein
453	 25.34	-1	492259..492771	+	170	119953259	-	BT0469	-	lipoprotein signal peptidase
454	 17.54	-2	492768..492995	+	75	119953260	-	BT0469A	-	hypothetical protein
455	 30.40	0	493010..493828	+	272	119953261	-	BT0471	-	hypothetical protein
456	 36.41	+2	493874..495175	+	433	119953262	-	BT0472	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
457	 29.81	0	495395..496783	+	462	119953263	-	BT0473	-	Na+ driven multidrug efflux pump
458	 21.79	-2	496918..497307	-	129	119953264	-	BT0475	-	hypothetical protein
459	 37.05	+2	497704..498888	+	394	119953265	-	BT0476	-	protein translation elongation factor Tu (EF-TU)
460	 33.33	+1	498935..499246	+	103	119953266	-	BT0477	-	SSU ribosomal protein S10P
461	 38.57	+2	499282..499911	+	209	119953267	-	BT0478	-	LSU ribosomal protein L3P
462	 30.64	0	499874..500542	+	222	119953268	-	BT0479	-	LSU ribosomal protein L1E
463	 29.97	0	500564..500860	+	98	119953269	-	BT0480	-	LSU ribosomal protein L23P
464	 38.62	+2	500860..501711	+	283	119953270	-	BT0481	-	LSU ribosomal protein L2P
465	 35.48	+1	501721..501999	+	92	119953271	-	BT0482	-	SSU ribosomal protein S19P
466	 37.47	+2	502005..502367	+	120	119953272	-	BT0483	-	LSU ribosomal protein L22P
467	 30.57	0	502371..503201	+	276	119953273	-	BT0484	-	SSU ribosomal protein S3P
468	 42.93	+2	503221..503637	+	138	119953274	-	BT0485	-	LSU ribosomal protein L16P
469	 30.35	0	503641..503841	+	66	119953275	-	BT0486	-	LSU ribosomal protein L29P
470	 32.55	0	503847..504101	+	84	119953276	-	BT0487	-	SSU ribosomal protein S17P
471	 39.02	+2	504132..504500	+	122	119953277	-	BT0488	-	LSU ribosomal protein L14P
472	 32.35	0	504511..504816	+	101	119953278	-	BT0489	-	LSU ribosomal protein L24P
473	 32.97	+1	504820..505368	+	182	119953279	-	BT0490	-	LSU ribosomal protein L5P
474	 36.56	+2	505383..505568	+	61	119953280	-	BT0491	-	SSU ribosomal protein S14P
475	 31.33	0	505578..505976	+	132	119953281	-	BT0492	-	SSU ribosomal protein S8P
476	 34.07	+1	505996..506538	+	180	119953282	-	BT0493	-	LSU ribosomal protein L6P
477	 29.72	0	506556..506915	+	119	119953283	-	BT0494	-	LSU ribosomal protein L18P
478	 36.97	+2	506927..507421	+	164	119953284	-	BT0495	-	SSU ribosomal protein S5P
479	 29.81	0	507425..507736	+	103	119953285	-	BT0496	-	LSU ribosomal protein L30P
480	 35.16	+1	507729..508166	+	145	119953286	-	BT0497	-	LSU ribosomal protein L15P
481	 30.57	0	508179..509483	+	434	119953287	-	BT0498	-	protein translocase subunit SecY
482	 24.56	-1	509493..509606	+	37	119953288	-	BT0499	-	LSU ribosomal protein L36P
483	 33.86	+1	509616..509993	+	125	119953289	-	BT0500	-	SSU ribosomal protein S13P
484	 35.64	+1	510024..510413	+	129	119953290	-	BT0501	-	SSU ribosomal protein S11P
485	 31.40	0	510426..511460	+	344	119953291	-	BT0502	-	DNA-directed RNA polymerase alpha chain
486	 30.93	0	511479..511853	+	124	119953292	-	BT0503	-	LSU ribosomal protein L17P
487	 32.75	0	511925..513466	+	513	119953293	-	BT0504	-	hydrolase (HAD superfamily)
488	 30.87	0	513435..514247	+	270	119953294	-	BT0505	-	hypothetical protein
489	 27.65	0	514228..515019	+	263	119953295	-	BT0506	-	putative cell adhesion protein
490	 23.45	-1	515016..515774	-	252	119953296	-	BT0507	-	germination protein GerM
491	 28.93	0	515861..517177	+	438	119953297	-	BT0508	-	GTP-binding protein
492	 27.62	0	517174..518433	+	419	119953298	-	BT0509	-	hypothetical protein
493	 26.78	0	518443..519129	+	228	119953299	-	BT0511	-	phosphocarrier protein HPr-phosphatase
494	 28.95	0	519131..526036	+	2301	119953300	-	BT0512	-	hypothetical membrane associated protein
495	 33.53	+1	526049..527596	+	515	119953301	-	BT0513	-	phenylalanyl-tRNA synthetase alpha chain
496	 30.62	0	527589..529283	+	564	119953302	-	BT0514	-	phenylalanyl-tRNA synthetase beta chain
497	 33.74	+1	529382..530359	+	325	119953303	-	BT0515	-	thioredoxin reductase
498	 26.67	0	530388..531122	-	244	119953304	-	BT0516	-	23S rRNA methyltransferase
499	 32.79	+1	531124..532221	-	365	119953305	-	BT0517	-	chaperone protein DnaJ
500	 36.25	+1	532221..534173	-	650	119953306	-	BT0518	-	chaperone protein DnaK
501	 28.96	0	534154..534702	-	182	119953307	-	BT0519	-	GrpE protein
502	 31.55	0	535253..536821	+	522	119953308	-	BT0522	-	glutamine-dependent NAD(+) synthetase
503	 26.70	0	536814..538397	+	527	119953309	-	BT0522A	-	two-component response regulator
504	 23.68	-1	538523..538957	-	144	119953310	-	BT0525	-	hypothetical protein
505	 27.31	0	539075..540883	+	602	119953311	-	BT0526	-	hypothetical protein
506	 30.04	0	540873..541661	+	262	119953312	-	BT0527	-	Bvg accessory factor
507	 27.26	0	541950..542756	-	268	119953313	-	BT0530	-	hypothetical protein
508	 29.41	0	542743..543354	-	203	119953314	-	BT0531	-	N-acetylmuramoyl-L-alanine amidase
509	 25.10	-1	543357..544643	-	428	119953315	-	BT0532	-	hypothetical protein
510	 30.70	0	545035..545793	+	252	119953316	-	BT0533	-	metal-dependent hydrolase
511	 31.23	0	545813..546571	+	252	119953317	-	BT0534	-	exodeoxyribonuclease III
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.