IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
362	 33.42	+1	387108..388277	+	389	119953168	-	BT0376	-	S-adenosylmethionine synthetase
363	 31.03	0	388226..388747	+	173	119953169	-	BT0377	-	autoinducer-2 production protein LuxS
364	 32.64	0	388890..389321	-	143	119953170	-	BT0379	-	bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
365	 30.47	0	389372..390733	-	453	119953171	-	BT0380	-	Mg2+ transporter MgtE
366	 30.32	0	390788..392245	-	485	119953172	-	BT0381	-	hypothetical membrane spanning protein
367	 29.98	0	392490..393503	-	337	119953173	-	BT0382	-	nucleoside-binding protein
368	 31.93	0	393540..394610	-	356	119953174	-	BT0383	-	nucleoside-binding protein
369	 32.76	0	394772..395818	-	348	119953175	-	BT0384	-	nucleoside-binding protein
370	 33.82	+1	395846..396877	-	343	119953176	-	BT0385	-	nucleoside-binding protein
371	 35.44	+1	396934..397407	-	157	119953177	-	BT0386	-	SSU ribosomal protein S7P
372	 37.87	+2	397422..397796	-	124	119953178	-	BT0387	-	SSU ribosomal protein S12P
373	 34.20	+1	397859..401992	-	1377	119953179	-	BT0388	-	DNA-directed RNA polymerase beta' chain
374	 34.05	+1	402007..405474	-	1155	119953180	-	BT0389	-	DNA-directed RNA polymerase beta chain
375	 38.17	+2	405560..405931	-	123	119953181	-	BT0390	-	LSU ribosomal protein L12P (L7/L12)
376	 30.92	0	406008..406505	-	165	119953182	-	BT0391	-	LSU ribosomal protein L10P
377	 32.89	+1	406516..407190	-	224	119953183	-	BT0392	-	LSU ribosomal protein L1P
378	 36.32	+2	407190..407624	-	144	119953184	-	BT0393	-	LSU ribosomal protein L11P
379	 36.04	+1	407678..408232	-	184	119953185	-	BT0394	-	transcription antitermination protein NusG
380	 26.90	0	408242..408412	-	56	119953186	-	BT0395	-	protein translocase subunit SecE
381	 31.11	0	408525..408704	-	59	119953187	-	BT0396	-	LSU ribosomal protein L33P
382	 29.00	0	408885..409784	-	299	119953188	-	BT0397	-	outer membrane protein
383	 29.03	0	409748..410770	-	340	119953189	-	BT0398	-	hypothetical protein
384	 25.97	0	410795..412153	+	452	119953190	-	BT0398A	-	hypothetical protein
385	 22.68	-1	412166..412822	+	218	119953191	-	BT0399	-	hypothetical protein
386	 24.18	-1	413248..414438	+	396	119953192	-	BT0401	-	sodium:dicarboxylate symporter family protein
387	 32.27	0	414465..415970	-	501	119953193	-	BT0402	-	prolyl-tRNA synthetase
388	 29.33	0	416518..417117	+	199	119953194	-	BT0405	-	hypothetical protein
389	 31.89	0	417125..417955	+	276	119953195	-	BT0406	-	hypothetical protein
390	 29.12	0	417995..419110	-	371	119953196	-	BT0407	-	mannose-6-phosphate isomerase
391	 35.21	+1	419107..420975	-	622	119953197	-	BT0408	-	PTS system, mannose-specific IIABC component
392	 26.21	0	421079..421738	+	219	119953198	-	BT0409	-	hypothetical protein
393	 27.78	0	421735..422616	+	293	119953199	-	BT0411	-	endonuclease
394	 22.91	-1	422601..423377	+	258	119953200	-	BT0412	-	hypothetical protein
395	 26.97	0	423381..423977	-	198	119953201	-	BT0413	-	hypothetical membrane spanning protein
396	 31.37	0	423977..424996	-	339	119953202	-	BT0413A	-	peptidyl-prolyl cis-trans isomerase
397	 27.76	0	425143..426003	+	286	119953203	-	BT0414	-	pili chemotaxis protein methyltransferase CheR-like PilK
398	 28.41	0	426039..427175	+	378	119953204	-	BT0415	-	protein-glutamate methylesterase
399	 30.69	0	427199..428407	+	402	119953205	-	BT0416	-	pheromone shutdown protein
400	 31.28	0	428445..429077	+	210	119953206	-	BT0417	-	adenylate kinase
401	 31.91	0	429150..430205	+	351	119953207	-	BT0418	-	hypothetical protein
402	 30.76	0	430208..431140	-	310	119953208	-	BT0419	-	two-component response regulator
403	 27.72	0	431152..435585	-	1477	119953209	-	BT0420	-	sensory transduction protein kinase
404	 25.24	-1	439012..439851	-	279	119953210	-	BT0421	-	hydrolase (HAD superfamily)
405	 25.33	-1	439985..440509	+	174	119953211	-	BT0421A	-	hypoxanthine-guanine phosphoribosyltransferase
406	 30.06	0	440519..441802	+	427	119953212	-	BT0421B	-	adenylosuccinate synthetase
407	 30.48	0	441787..443190	+	467	119953213	-	BT0421C	-	adenylosuccinate lyase
408	 32.47	0	443187..443765	-	192	119953214	-	BT0422	-	DNA-3-methyladenine glycosylase II
409	 32.40	0	446363..447751	-	462	119953215	-	BT0422A	-	DNA repair protein RadA
410	 31.11	0	448139..448813	-	224	119953216	-	BT0427	-	methyltransferase
411	 27.73	0	449083..449403	+	106	119953217	-	BT0428	-	hypothetical protein
412	 29.82	0	449413..449811	-	132	119953218	-	BT0429	-	hypothetical protein
413	 25.73	0	449917..450495	+	192	119953219	-	BT0430	-	Xaa-Pro dipeptidase
414	 24.97	-1	450687..451439	+	250	119953220	-	BT0431	-	Soj protein
415	 23.55	-1	451442..452146	+	234	119953221	-	BT0432	-	hypothetical protein
416	 27.92	0	452139..452951	-	270	119953222	-	BT0434	-	probable chromosome partitioning protein ParB
417	 32.27	0	453056..455503	-	815	119953223	-	BT0435	-	DNA gyrase subunit A
418	 33.44	+1	455500..457419	-	639	119953224	-	BT0436	-	DNA gyrase subunit B
419	 28.04	0	457651..459105	+	484	119953225	-	BT0437	-	chromosomal replication initiator protein DnaA
420	 30.23	0	459346..460506	+	386	119953226	-	BT0438	-	DNA polymerase III, beta chain
421	 28.78	0	460519..461595	+	358	119953227	-	BT0438A	-	DNA replication and repair protein RecF
422	 25.33	-1	461576..461875	+	99	119953228	-	BT0439	-	hypothetical protein
423	 39.10	+2	461966..462121	+	51	119953229	-	BT0440	-	LSU ribosomal protein L34P
424	 27.83	0	462102..462446	+	114	119953230	-	BT0441	-	ribonuclease P protein component
425	 26.74	0	462443..464080	+	545	119953231	-	BT0442	-	60 kDa inner membrane protein YidC
426	 29.60	0	464077..464799	+	240	119953232	-	BT0443	-	Jag protein
427	 30.88	0	464950..466008	+	352	119953233	-	BT0444	-	UDP-glucuronate 4-epimerase
428	 35.46	+1	466129..467208	+	359	119953234	-	BT0445	-	fructose-bisphosphate aldolase
429	 27.49	0	467477..467887	+	136	119953235	-	BT0445A	-	small heat shock protein
430	 29.86	0	467915..469672	-	585	119953236	-	BT0446	-	aspartyl-tRNA synthetase
431	 28.76	0	469676..471796	-	706	119953237	-	BT0447	-	Na(+)/H(+) antiporter
432	 28.37	0	471793..472074	-	93	119953238	-	BT0448	-	phosphocarrier protein HPr
433	 24.58	-1	472089..472385	-	98	119953239	-	BT0449	-	ribosome-associated factor Y
434	 26.02	0	473576..474163	-	195	119953240	-	BT0451	-	chromate transport protein
435	 25.22	-1	474112..474690	-	192	119953241	-	BT0452	-	chromate transport protein
436	 29.64	0	474864..475730	+	288	119953242	-	BT0453	-	mechanosensitive ion channel
437	 26.48	0	475727..476878	-	383	119953243	-	BT0454	-	1,2-diacylglycerol 3-glucosyltransferase
438	 24.75	-1	476938..477927	+	329	119953244	-	BT0455	-	hypothetical cytosolic protein
439	 27.47	0	478027..479835	-	602	119953245	-	BT0457	-	excinuclease ABC subunit C
440	 30.50	0	479953..481470	+	505	119953246	-	BT0458	-	hypothetical protein
441	 27.37	0	481463..482770	+	435	119953247	-	BT0459	-	tetratricopeptide repeat family protein
442	 25.75	0	483112..483810	-	232	119953248	-	BT0460	-	hypothetical protein
443	 30.66	0	484378..486024	+	548	119953249	-	BT0461	-	DNA polymerase III subunit gamma/tau
444	 30.00	0	486031..486330	+	99	119953250	-	BT0462	-	hypothetical protein
445	 32.48	0	486334..486918	+	194	119953251	-	BT0462A	-	recombination protein RecR
446	 32.75	0	487242..487751	+	169	119953252	-	BT0463	-	nucleoside diphosphate kinase
447	 25.12	-1	487726..488577	+	283	119953253	-	BT0463A	-	adenine-specific methyltransferase
448	 27.93	0	488815..489351	+	178	119953254	-	BT0464	-	hypothetical protein
449	 29.76	0	489348..490046	+	232	119953255	-	BT0465	-	hypothetical protein
450	 34.65	+1	489982..490815	+	277	119953256	-	BT0466	-	ABC transporter ATP-binding protein
451	 26.81	0	490812..491501	+	229	119953257	-	BT0467	-	hypothetical cytosolic protein
452	 28.15	0	491401..492249	+	282	119953258	-	BT0468	-	NIF3-related protein
453	 25.34	-1	492259..492771	+	170	119953259	-	BT0469	-	lipoprotein signal peptidase
454	 17.54	-2	492768..492995	+	75	119953260	-	BT0469A	-	hypothetical protein
455	 30.40	0	493010..493828	+	272	119953261	-	BT0471	-	hypothetical protein
456	 36.41	+2	493874..495175	+	433	119953262	-	BT0472	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
457	 29.81	0	495395..496783	+	462	119953263	-	BT0473	-	Na+ driven multidrug efflux pump
458	 21.79	-2	496918..497307	-	129	119953264	-	BT0475	-	hypothetical protein
459	 37.05	+2	497704..498888	+	394	119953265	-	BT0476	-	protein translation elongation factor Tu (EF-TU)
460	 33.33	+1	498935..499246	+	103	119953266	-	BT0477	-	SSU ribosomal protein S10P
461	 38.57	+2	499282..499911	+	209	119953267	-	BT0478	-	LSU ribosomal protein L3P
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.