IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
283	 33.52	+1	301706..302752	-	348	119953089	-	BT0290	-	flagellar motor switch protein FliG
284	 33.16	+1	302756..304462	-	568	119953090	-	BT0291	-	flagellar M-ring protein FliF
285	 28.79	0	304476..304805	-	109	119953091	-	BT0292	-	flagellar hook-basal body complex protein FliE
286	 37.47	+2	304821..305279	-	152	119953092	-	BT0293	-	flagellar basal-body rod protein FlgC
287	 30.43	0	305305..305718	-	137	119953093	-	BT0294	-	flagellar basal-body rod protein FlgB
288	 31.86	0	305746..307101	-	451	119953094	-	BT0295	-	ATP-dependent hsl protease ATP-binding subunit HslU
289	 34.25	+1	307098..307640	-	180	119953095	-	BT0296	-	ATP-dependent protease HslV
290	 30.16	0	307652..308596	-	314	119953096	-	BT0297	-	Smf protein
291	 29.13	0	308602..309291	-	229	119953097	-	BT0298	-	hypothetical protein
292	 35.99	+1	309292..310533	-	413	119953098	-	BT0299	-	cell division protein FtsZ
293	 34.94	+1	310509..311750	-	413	119953099	-	BT0300	-	cell division protein FtsA
294	 24.33	-1	311750..312493	-	247	119953100	-	BT0301	-	DivIB protein
295	 29.89	0	312533..313636	-	367	119953101	-	BT0302	-	cell division protein FtsW
296	 30.87	0	313644..314699	-	351	119953102	-	BT0303	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
297	 29.46	0	314717..316111	-	464	119953103	-	BT0304	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-L-ornithine--D-alanyl-D-alanine ligase
298	 21.99	-2	316127..316408	-	93	119953104	-	BT0305	-	hypothetical protein
299	 30.54	0	316401..317294	-	297	119953105	-	BT0306	-	S-adenosyl-methyltransferase MraW
300	 24.82	-1	317287..318120	-	277	119953106	-	BT0307	-	hypothetical protein
301	 23.97	-1	318123..319190	-	355	119953107	-	BT0308	-	hypothetical protein
302	 27.54	0	319216..319974	-	252	119953108	-	BT0309	-	hypothetical protein
303	 30.47	0	319990..321666	-	558	119953109	-	BT0309A	-	DNA repair protein RecN
304	 30.38	0	321701..322579	-	292	119953110	-	BT0311	-	ATP-NAD kinase
305	 30.32	0	322527..323057	-	176	119953111	-	BT0312	-	chemotaxis protein CheW
306	 28.93	0	323098..323733	-	211	119953113	-	BT0313	-	23S rRNA Um2552 2'-O-methyltransferase
307	 26.55	0	323728..324774	+	348	119953112	-	BT0314	-	dimethylallyltransferase
308	 23.98	-1	324771..325454	+	227	119953114	-	BT0315	-	hypothetical protein
309	 25.15	-1	325432..326238	-	268	119953115	-	BT0316	-	nucleoside transport system permease protein
310	 26.90	0	326239..327171	-	310	119953116	-	BT0317	-	nucleoside transport system permease protein
311	 27.78	0	327168..328625	-	485	119953117	-	BT0318	-	nucleoside transport ATP-binding protein
312	 27.79	0	328629..329729	-	366	119953118	-	BT0319	-	nucleoside-binding protein
313	 25.27	-1	329994..331085	-	363	119953119	-	BT0322	-	hypothetical protein
314	 31.82	0	331604..332725	+	373	119953120	-	BT0323	-	hypothetical membrane associated protein
315	 28.46	0	332821..333189	+	122	119953121	-	BT0324	-	hypothetical protein
316	 28.58	0	333217..334332	-	371	119953122	-	BT0325	-	hypothetical membrane associated protein
317	 28.69	0	334397..337258	-	953	119953123	-	BT0326	-	hypothetical protein
318	 28.19	0	337274..338167	-	297	119953124	-	BT0327	-	glycerol-3-phosphate o-acyltransferase, putative
319	 32.46	0	338367..339962	+	531	119953125	-	BT0328	-	oligopeptide-binding protein OppA
320	 30.06	0	340384..341970	+	528	119953126	-	BT0329	-	oligopeptide-binding protein OppA
321	 31.38	0	342202..343122	+	306	119953127	-	BT0332	-	oligopeptide transport system permease protein OppB
322	 32.10	0	343132..344184	+	350	119953128	-	BT0333	-	oligopeptide transport system permease protein OppC
323	 31.70	0	344156..345073	+	305	119953129	-	BT0334	-	oligopeptide transport ATP-binding protein OppD
324	 32.02	0	345070..346059	+	329	119953130	-	BT0335	-	oligopeptide transport ATP-binding protein OppF
325	 26.98	0	346217..346972	-	251	119953131	-	BT0336	-	hypothetical protein
326	 35.20	+1	347005..348399	+	464	119953132	-	BT0337	-	enolase
327	 34.31	+1	348450..348860	-	136	119953133	-	BT0338	-	SSU ribosomal protein S9P
328	 32.00	0	348871..349320	-	149	119953134	-	BT0339	-	LSU ribosomal protein L13P
329	 27.74	0	349400..350185	-	261	119953135	-	BT0340	-	peptide methionine sulfoxide reductase
330	 31.48	0	350178..351635	-	485	119953136	-	BT0341	-	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
331	 31.60	0	351625..353070	-	481	119953137	-	BT0342	-	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
332	 28.07	0	353082..353366	-	94	119953138	-	BT0343	-	glutamyl-tRNA(Gln) amidotransferase subunit C
333	 27.89	0	353376..355469	-	697	119953139	-	BT0344	-	DNA helicase II
334	 29.08	0	355469..356668	-	399	119953140	-	BT0345	-	hypothetical membrane associated protein
335	 30.43	0	356680..357333	-	217	119953141	-	BT0346	-	outer-membrane lipoproteins carrier protein
336	 25.67	-1	357499..358908	+	469	119953142	-	BT0347	-	fibrinogen-binding protein
337	 32.01	0	359019..360452	+	477	119953143	-	BT0348	-	pyruvate kinase
338	 23.74	-1	360554..361210	+	218	119953144	-	BT0349	-	hypothetical protein
339	 32.26	0	361231..361509	-	92	119953145	-	BT0350	-	LSU ribosomal protein L28P
340	 27.54	0	361519..363159	-	546	119953146	-	BT0351	-	hypothetical protein
341	 21.87	-2	363202..364335	+	377	119953147	-	BT0352	-	hypothetical protein
342	 25.35	-1	364320..366122	-	600	119953148	-	BT0353	-	hypothetical protein
343	 24.31	-1	366129..367070	-	313	119953149	-	BT0354	-	hypothetical protein
344	 28.19	0	367105..367590	-	161	119953150	-	BT0355	-	CarD-like transcriptional regulator
345	 25.08	-1	367637..368230	-	197	119953151	-	BT0356	-	hypothetical protein
346	 29.08	0	368223..368951	-	242	119953152	-	BT0358	-	hypothetical cytosolic protein
347	 30.96	0	368955..370385	-	476	119953153	-	BT0359	-	carboxy-terminal processing protease precursor
348	 24.94	-1	370446..370874	+	142	119953154	-	BT0360	-	hypothetical protein
349	 25.93	0	370879..372012	+	377	119953155	-	BT0361	-	ATP-binding protein
350	 30.10	0	372023..372982	+	319	119953156	-	BT0362	-	prolipoprotein diacylglyceryl transferase
351	 25.35	-1	373034..375025	+	663	119953157	-	BT0363	-	sensory box/GGDEF family protein
352	 33.55	+1	375197..376573	+	458	119953158	-	BT0366	-	probable M18-family aminopeptidase 1
353	 27.17	0	376570..376845	+	91	119953159	-	BT0367	-	hypothetical protein
354	 29.91	0	376860..377912	-	350	119953160	-	BT0368	-	glycerol-3-phosphate dehydrogenase (NAD(P)+)
355	 28.96	0	377937..380225	-	762	119953161	-	BT0369	-	ATP-dependent Clp protease ATP-binding subunit ClpA
356	 32.92	+1	380236..381456	-	406	119953162	-	BT0370	-	tyrosyl-tRNA synthetase
357	 33.18	+1	381453..382799	-	448	119953163	-	BT0371	-	glycyl-tRNA synthetase
358	 32.35	0	382822..384345	-	507	119953164	-	BT0372	-	glutamyl-tRNA synthetase
359	 21.41	-2	384314..385093	-	259	119953165	-	BT0373	-	hypothetical protein
360	 28.60	0	385224..386363	+	379	119953166	-	BT0374	-	sensory transduction protein
361	 29.83	0	386376..387089	+	237	119953167	-	BT0375	-	5'-methylthioadenosine nucleosidase
362	 33.42	+1	387108..388277	+	389	119953168	-	BT0376	-	S-adenosylmethionine synthetase
363	 31.03	0	388226..388747	+	173	119953169	-	BT0377	-	autoinducer-2 production protein LuxS
364	 32.64	0	388890..389321	-	143	119953170	-	BT0379	-	bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
365	 30.47	0	389372..390733	-	453	119953171	-	BT0380	-	Mg2+ transporter MgtE
366	 30.32	0	390788..392245	-	485	119953172	-	BT0381	-	hypothetical membrane spanning protein
367	 29.98	0	392490..393503	-	337	119953173	-	BT0382	-	nucleoside-binding protein
368	 31.93	0	393540..394610	-	356	119953174	-	BT0383	-	nucleoside-binding protein
369	 32.76	0	394772..395818	-	348	119953175	-	BT0384	-	nucleoside-binding protein
370	 33.82	+1	395846..396877	-	343	119953176	-	BT0385	-	nucleoside-binding protein
371	 35.44	+1	396934..397407	-	157	119953177	-	BT0386	-	SSU ribosomal protein S7P
372	 37.87	+2	397422..397796	-	124	119953178	-	BT0387	-	SSU ribosomal protein S12P
373	 34.20	+1	397859..401992	-	1377	119953179	-	BT0388	-	DNA-directed RNA polymerase beta' chain
374	 34.05	+1	402007..405474	-	1155	119953180	-	BT0389	-	DNA-directed RNA polymerase beta chain
375	 38.17	+2	405560..405931	-	123	119953181	-	BT0390	-	LSU ribosomal protein L12P (L7/L12)
376	 30.92	0	406008..406505	-	165	119953182	-	BT0391	-	LSU ribosomal protein L10P
377	 32.89	+1	406516..407190	-	224	119953183	-	BT0392	-	LSU ribosomal protein L1P
378	 36.32	+2	407190..407624	-	144	119953184	-	BT0393	-	LSU ribosomal protein L11P
379	 36.04	+1	407678..408232	-	184	119953185	-	BT0394	-	transcription antitermination protein NusG
380	 26.90	0	408242..408412	-	56	119953186	-	BT0395	-	protein translocase subunit SecE
381	 31.11	0	408525..408704	-	59	119953187	-	BT0396	-	LSU ribosomal protein L33P
382	 29.00	0	408885..409784	-	299	119953188	-	BT0397	-	outer membrane protein
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.