IslandPathversion 1.0

IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 29.24 STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
244	 27.47	0	260275..262560	+	761	119953050	-	BT0252	-	transporter, RND superfamily
245	 30.68	0	262619..265066	-	815	119953051	-	BT0253	-	ATP-dependent protease La
246	 22.85	-1	265134..265820	+	228	119953052	-	BT0253A	-	hypothetical protein
247	 25.20	-1	265843..267957	+	704	119953053	-	BT0254	-	single-stranded-DNA-specific exonuclease RecJ
248	 28.54	0	267957..268895	+	312	119953054	-	BT0255	-	cell wall endopeptidase, family M23/M37
249	 27.85	0	268906..269124	+	72	119953055	-	BT0256	-	SSU ribosomal protein S21P
250	 30.60	0	269164..271506	-	780	119953056	-	BT0257	-	cell division protein FtsK
251	 27.69	0	271520..272317	-	265	119953057	-	BT0258	-	bacitracin resistance protein
252	 27.54	0	272330..274522	-	730	119953058	-	BT0259	-	soluble lytic murein transglycosylase
253	 29.13	0	274452..275735	-	427	119953059	-	BT0260	-	hypothetical protein
254	 27.21	0	275835..277205	+	456	119953060	-	BT0261	-	tetratricopeptide repeat family protein
255	 28.44	0	277207..278472	-	421	119953061	-	BT0262	-	cell wall endopeptidase, family M23/M37
256	 25.79	0	278525..279028	+	167	119953062	-	BT0263	-	signal peptidase I
257	 31.42	0	279074..280585	-	503	119953063	-	BT0264	-	chaperone protein DnaK
258	 25.10	-1	280582..281079	-	165	119953064	-	BT0265	-	hypothetical protein
259	 28.53	0	281101..281412	-	103	119953065	-	BT0266	-	hypothetical protein
260	 32.81	+1	281437..283335	-	632	119953066	-	BT0267	-	hypothetical protein
261	 27.37	0	283338..283823	-	161	119953067	-	BT0268	-	hypothetical protein
262	 30.19	0	283829..284719	-	296	119953068	-	BT0269	-	flagellar synthesis regulator FleN
263	 29.61	0	284729..285910	-	393	119953069	-	BT0270	-	flagellar biosynthesis protein FlhF
264	 32.62	0	285900..287990	-	696	119953070	-	BT0271	-	flagellar biosynthesis protein FlhA
265	 30.30	0	287999..289120	-	373	119953071	-	BT0272	-	flagellar biosynthetic protein FlhB
266	 26.24	0	289117..289905	-	262	119953072	-	BT0273	-	flagellar biosynthetic protein FliR
267	 25.00	-1	289921..290184	-	87	119953073	-	BT0274	-	flagellar biosynthetic protein FliQ
268	 30.22	0	290194..290964	-	256	119953074	-	BT0275	-	flagellar biosynthetic protein FliP
269	 23.57	-1	290968..291612	-	214	119953075	-	BT0276	-	flagellar biosynthetic protein FliZ
270	 33.91	+1	291605..291949	-	114	119953076	-	BT0277	-	flagellar motor switch protein FliN
271	 33.90	+1	291999..293057	-	352	119953077	-	BT0278	-	flagellar motor switch protein FliM
272	 31.46	0	293077..293610	-	177	119953078	-	BT0279	-	flagellar protein FliL
273	 33.33	+1	293652..294440	-	262	119953079	-	BT0280	-	chemotaxis MotB protein
274	 36.51	+2	294437..295222	-	261	119953080	-	BT0281	-	chemotaxis MotA protein
275	 31.53	0	295219..295440	-	73	119953081	-	BT0282	-	motility protein
276	 35.29	+1	295458..296786	-	442	119953082	-	BT0283	-	flagellar hook protein FlgE
277	 31.49	0	296791..297225	-	144	119953083	-	BT0284	-	basal-body rod modification protein FlgD
278	 25.73	0	297238..298407	-	389	119953084	-	BT0285	-	flagellar hook-length control protein
279	 31.54	0	298411..299025	-	204	119953085	-	BT0286	-	FlbB protein
280	 22.61	-1	299022..299450	-	142	119953086	-	BT0287	-	flagellar protein
281	 32.42	0	299447..300757	-	436	119953087	-	BT0288	-	flagellum-specific ATP synthase
282	 31.28	0	300771..301697	-	308	119953088	-	BT0289	-	flagellar assembly protein FliH
283	 33.52	+1	301706..302752	-	348	119953089	-	BT0290	-	flagellar motor switch protein FliG
284	 33.16	+1	302756..304462	-	568	119953090	-	BT0291	-	flagellar M-ring protein FliF
285	 28.79	0	304476..304805	-	109	119953091	-	BT0292	-	flagellar hook-basal body complex protein FliE
286	 37.47	+2	304821..305279	-	152	119953092	-	BT0293	-	flagellar basal-body rod protein FlgC
287	 30.43	0	305305..305718	-	137	119953093	-	BT0294	-	flagellar basal-body rod protein FlgB
288	 31.86	0	305746..307101	-	451	119953094	-	BT0295	-	ATP-dependent hsl protease ATP-binding subunit HslU
289	 34.25	+1	307098..307640	-	180	119953095	-	BT0296	-	ATP-dependent protease HslV
290	 30.16	0	307652..308596	-	314	119953096	-	BT0297	-	Smf protein
291	 29.13	0	308602..309291	-	229	119953097	-	BT0298	-	hypothetical protein
292	 35.99	+1	309292..310533	-	413	119953098	-	BT0299	-	cell division protein FtsZ
293	 34.94	+1	310509..311750	-	413	119953099	-	BT0300	-	cell division protein FtsA
294	 24.33	-1	311750..312493	-	247	119953100	-	BT0301	-	DivIB protein
295	 29.89	0	312533..313636	-	367	119953101	-	BT0302	-	cell division protein FtsW
296	 30.87	0	313644..314699	-	351	119953102	-	BT0303	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
297	 29.46	0	314717..316111	-	464	119953103	-	BT0304	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-L-ornithine--D-alanyl-D-alanine ligase
298	 21.99	-2	316127..316408	-	93	119953104	-	BT0305	-	hypothetical protein
299	 30.54	0	316401..317294	-	297	119953105	-	BT0306	-	S-adenosyl-methyltransferase MraW
300	 24.82	-1	317287..318120	-	277	119953106	-	BT0307	-	hypothetical protein
301	 23.97	-1	318123..319190	-	355	119953107	-	BT0308	-	hypothetical protein
302	 27.54	0	319216..319974	-	252	119953108	-	BT0309	-	hypothetical protein
303	 30.47	0	319990..321666	-	558	119953109	-	BT0309A	-	DNA repair protein RecN
304	 30.38	0	321701..322579	-	292	119953110	-	BT0311	-	ATP-NAD kinase
305	 30.32	0	322527..323057	-	176	119953111	-	BT0312	-	chemotaxis protein CheW
306	 28.93	0	323098..323733	-	211	119953113	-	BT0313	-	23S rRNA Um2552 2'-O-methyltransferase
307	 26.55	0	323728..324774	+	348	119953112	-	BT0314	-	dimethylallyltransferase
308	 23.98	-1	324771..325454	+	227	119953114	-	BT0315	-	hypothetical protein
309	 25.15	-1	325432..326238	-	268	119953115	-	BT0316	-	nucleoside transport system permease protein
310	 26.90	0	326239..327171	-	310	119953116	-	BT0317	-	nucleoside transport system permease protein
311	 27.78	0	327168..328625	-	485	119953117	-	BT0318	-	nucleoside transport ATP-binding protein
312	 27.79	0	328629..329729	-	366	119953118	-	BT0319	-	nucleoside-binding protein
313	 25.27	-1	329994..331085	-	363	119953119	-	BT0322	-	hypothetical protein
314	 31.82	0	331604..332725	+	373	119953120	-	BT0323	-	hypothetical membrane associated protein
315	 28.46	0	332821..333189	+	122	119953121	-	BT0324	-	hypothetical protein
316	 28.58	0	333217..334332	-	371	119953122	-	BT0325	-	hypothetical membrane associated protein
317	 28.69	0	334397..337258	-	953	119953123	-	BT0326	-	hypothetical protein
318	 28.19	0	337274..338167	-	297	119953124	-	BT0327	-	glycerol-3-phosphate o-acyltransferase, putative
319	 32.46	0	338367..339962	+	531	119953125	-	BT0328	-	oligopeptide-binding protein OppA
320	 30.06	0	340384..341970	+	528	119953126	-	BT0329	-	oligopeptide-binding protein OppA
321	 31.38	0	342202..343122	+	306	119953127	-	BT0332	-	oligopeptide transport system permease protein OppB
322	 32.10	0	343132..344184	+	350	119953128	-	BT0333	-	oligopeptide transport system permease protein OppC
323	 31.70	0	344156..345073	+	305	119953129	-	BT0334	-	oligopeptide transport ATP-binding protein OppD
324	 32.02	0	345070..346059	+	329	119953130	-	BT0335	-	oligopeptide transport ATP-binding protein OppF
325	 26.98	0	346217..346972	-	251	119953131	-	BT0336	-	hypothetical protein
326	 35.20	+1	347005..348399	+	464	119953132	-	BT0337	-	enolase
327	 34.31	+1	348450..348860	-	136	119953133	-	BT0338	-	SSU ribosomal protein S9P
328	 32.00	0	348871..349320	-	149	119953134	-	BT0339	-	LSU ribosomal protein L13P
329	 27.74	0	349400..350185	-	261	119953135	-	BT0340	-	peptide methionine sulfoxide reductase
330	 31.48	0	350178..351635	-	485	119953136	-	BT0341	-	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
331	 31.60	0	351625..353070	-	481	119953137	-	BT0342	-	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
332	 28.07	0	353082..353366	-	94	119953138	-	BT0343	-	glutamyl-tRNA(Gln) amidotransferase subunit C
333	 27.89	0	353376..355469	-	697	119953139	-	BT0344	-	DNA helicase II
334	 29.08	0	355469..356668	-	399	119953140	-	BT0345	-	hypothetical membrane associated protein
335	 30.43	0	356680..357333	-	217	119953141	-	BT0346	-	outer-membrane lipoproteins carrier protein
336	 25.67	-1	357499..358908	+	469	119953142	-	BT0347	-	fibrinogen-binding protein
337	 32.01	0	359019..360452	+	477	119953143	-	BT0348	-	pyruvate kinase
338	 23.74	-1	360554..361210	+	218	119953144	-	BT0349	-	hypothetical protein
339	 32.26	0	361231..361509	-	92	119953145	-	BT0350	-	LSU ribosomal protein L28P
340	 27.54	0	361519..363159	-	546	119953146	-	BT0351	-	hypothetical protein
341	 21.87	-2	363202..364335	+	377	119953147	-	BT0352	-	hypothetical protein
342	 25.35	-1	364320..366122	-	600	119953148	-	BT0353	-	hypothetical protein
343	 24.31	-1	366129..367070	-	313	119953149	-	BT0354	-	hypothetical protein
29.24	MEAN

3.53	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.