IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
194	 28.51	0	202602..203534	+	310	119953000	-	BT0203	-	protease activity modulator HflK
195	 30.66	0	203536..204507	+	323	119953001	-	BT0204	-	protease activity modulator HflC
196	 26.89	0	205033..206661	+	542	119953002	-	BT0205	-	hypothetical protein
197	 29.30	0	206667..207212	-	181	119953003	-	BT0206	-	methyltransferase
198	 29.84	0	207298..208128	+	276	119953004	-	BT0207	-	UTP--glucose-1-phosphate uridylyltransferase
199	 21.89	-2	208129..209814	+	561	119953005	-	BT0208	-	hypothetical protein
200	 28.24	0	209891..211579	+	562	119953006	-	BT0209	-	mucin 2 precursor
201	 26.51	0	211572..213929	+	785	119953007	-	BT0210	-	surface-located membrane protein 1
202	 28.33	0	213926..215764	+	612	119953008	-	BT0211	-	DNA mismatch repair protein MutL
203	 22.00	-2	215785..216825	+	346	119953009	-	BT0212	-	hypothetical protein
204	 25.11	-1	217000..217656	-	218	119953010	-	BT0213	-	hypothetical protein
205	 33.68	+1	217634..218212	-	192	119953011	-	BT0214	-	protein translation elongation factor P (EF-P)
206	 30.68	0	218279..219184	+	301	119953012	-	BT0215	-	phosphate-binding protein
207	 31.35	0	219268..220176	+	302	119953013	-	BT0216	-	phosphate transport system permease protein PstC
208	 27.50	0	220173..221714	+	513	119953014	-	BT0217	-	phosphate transport system permease protein PstA
209	 31.11	0	221715..222479	+	254	119953015	-	BT0218	-	phosphate transport ATP-binding protein PstB
210	 34.06	+1	222480..223301	-	273	119953016	-	BT0219	-	zinc uptake transporter
211	 33.28	+1	223318..225099	-	593	119953017	-	BT0220	-	alanyl-tRNA synthetase
212	 27.58	0	225099..226349	-	416	119953018	-	BT0221	-	flagellar motor switch protein FliG
213	 30.28	0	226297..227016	-	239	119953019	-	BT0222	-	6-phosphogluconolactonase
214	 29.06	0	227019..227720	-	233	119953020	-	BT0223	-	hypothetical protein
215	 30.16	0	227792..228799	+	335	119953021	-	BT0225	-	NIFR3-like protein
216	 34.12	+1	228789..230066	-	425	119953022	-	BT0226	-	seryl-tRNA synthetase
217	 25.38	-1	230211..230927	+	238	119953023	-	BT0227	-	hypothetical protein
218	 26.65	0	230940..233858	+	972	119953024	-	BT0228	-	metalloprotease, insulinase family
219	 25.43	-1	233875..234165	-	96	119953025	-	BT0229	-	LSU ribosomal protein L31P
220	 32.17	0	234181..235725	-	514	119953026	-	BT0230	-	transcription termination factor Rho
221	 27.21	0	235814..236221	-	135	119953027	-	BT0231	-	hypothetical cytosolic protein
222	 29.97	0	236225..236551	-	108	119953028	-	BT0232	-	DNA-binding protein HbbU
223	 30.23	0	236563..236820	-	85	119953029	-	BT0233	-	SSU ribosomal protein S20P
224	 21.78	-2	236894..237715	-	273	119953030	-	BT0234	-	hypothetical membrane associated protein
225	 33.15	+1	237733..238839	-	368	119953031	-	BT0235	-	GTP-binding protein
226	 28.92	0	238865..240928	-	687	119953032	-	BT0236	-	tetratricopeptide repeat family protein
227	 29.21	0	241028..242581	+	517	119953033	-	BT0237	-	apolipoprotein N-acyltransferase
228	 29.86	0	242545..243321	-	258	119953034	-	BT0238	-	hypothetical protein
229	 29.45	0	243379..243996	-	205	119953035	-	BT0239	-	deoxyguanosine kinase
230	 23.50	-1	244234..244650	+	138	119953036	-	BT0239A	-	hypothetical protein
231	 35.17	+1	244795..245556	+	253	119953037	-	BT0240	-	glycerol uptake facilitator protein
232	 34.00	+1	245612..247111	+	499	119953038	-	BT0241	-	glycerol kinase
233	 33.48	+1	247216..248580	+	454	119953039	-	BT0241A	-	glycerol-3-phosphate transporter
234	 31.07	0	248654..249670	+	338	119953040	-	BT0241B	-	glycerophosphoryl diester phosphodiesterase
235	 30.65	0	249712..251274	+	520	119953041	-	BT0243	-	glycerol-3-phosphate dehydrogenase
236	 27.47	0	251360..251854	-	164	119953042	-	BT0244	-	UDP-N-acetylenolpyruvoylglucosamine reductase
237	 30.39	0	251851..252393	-	180	119953043	-	BT0245	-	hypothetical cytosolic protein
238	 30.42	0	252394..253422	-	342	119953044	-	BT0246	-	cell wall endopeptidase, family M23/M37
239	 25.50	-1	253649..254248	+	199	119953045	-	BT0247	-	nucleoside-triphosphatase
240	 28.03	0	254382..256154	+	590	119953046	-	BT0248	-	oligoendopeptidase F
241	 26.84	0	256166..256873	+	235	119953047	-	BT0249	-	phosphatidylcholine synthase
242	 27.26	0	256883..257491	+	202	119953048	-	BT0250	-	alkaline phosphatase like protein
243	 31.59	0	257736..260264	+	842	119953049	-	BT0251	-	leucyl-tRNA synthetase
244	 27.47	0	260275..262560	+	761	119953050	-	BT0252	-	transporter, RND superfamily
245	 30.68	0	262619..265066	-	815	119953051	-	BT0253	-	ATP-dependent protease La
246	 22.85	-1	265134..265820	+	228	119953052	-	BT0253A	-	hypothetical protein
247	 25.20	-1	265843..267957	+	704	119953053	-	BT0254	-	single-stranded-DNA-specific exonuclease RecJ
248	 28.54	0	267957..268895	+	312	119953054	-	BT0255	-	cell wall endopeptidase, family M23/M37
249	 27.85	0	268906..269124	+	72	119953055	-	BT0256	-	SSU ribosomal protein S21P
250	 30.60	0	269164..271506	-	780	119953056	-	BT0257	-	cell division protein FtsK
251	 27.69	0	271520..272317	-	265	119953057	-	BT0258	-	bacitracin resistance protein
252	 27.54	0	272330..274522	-	730	119953058	-	BT0259	-	soluble lytic murein transglycosylase
253	 29.13	0	274452..275735	-	427	119953059	-	BT0260	-	hypothetical protein
254	 27.21	0	275835..277205	+	456	119953060	-	BT0261	-	tetratricopeptide repeat family protein
255	 28.44	0	277207..278472	-	421	119953061	-	BT0262	-	cell wall endopeptidase, family M23/M37
256	 25.79	0	278525..279028	+	167	119953062	-	BT0263	-	signal peptidase I
257	 31.42	0	279074..280585	-	503	119953063	-	BT0264	-	chaperone protein DnaK
258	 25.10	-1	280582..281079	-	165	119953064	-	BT0265	-	hypothetical protein
259	 28.53	0	281101..281412	-	103	119953065	-	BT0266	-	hypothetical protein
260	 32.81	+1	281437..283335	-	632	119953066	-	BT0267	-	hypothetical protein
261	 27.37	0	283338..283823	-	161	119953067	-	BT0268	-	hypothetical protein
262	 30.19	0	283829..284719	-	296	119953068	-	BT0269	-	flagellar synthesis regulator FleN
263	 29.61	0	284729..285910	-	393	119953069	-	BT0270	-	flagellar biosynthesis protein FlhF
264	 32.62	0	285900..287990	-	696	119953070	-	BT0271	-	flagellar biosynthesis protein FlhA
265	 30.30	0	287999..289120	-	373	119953071	-	BT0272	-	flagellar biosynthetic protein FlhB
266	 26.24	0	289117..289905	-	262	119953072	-	BT0273	-	flagellar biosynthetic protein FliR
267	 25.00	-1	289921..290184	-	87	119953073	-	BT0274	-	flagellar biosynthetic protein FliQ
268	 30.22	0	290194..290964	-	256	119953074	-	BT0275	-	flagellar biosynthetic protein FliP
269	 23.57	-1	290968..291612	-	214	119953075	-	BT0276	-	flagellar biosynthetic protein FliZ
270	 33.91	+1	291605..291949	-	114	119953076	-	BT0277	-	flagellar motor switch protein FliN
271	 33.90	+1	291999..293057	-	352	119953077	-	BT0278	-	flagellar motor switch protein FliM
272	 31.46	0	293077..293610	-	177	119953078	-	BT0279	-	flagellar protein FliL
273	 33.33	+1	293652..294440	-	262	119953079	-	BT0280	-	chemotaxis MotB protein
274	 36.51	+2	294437..295222	-	261	119953080	-	BT0281	-	chemotaxis MotA protein
275	 31.53	0	295219..295440	-	73	119953081	-	BT0282	-	motility protein
276	 35.29	+1	295458..296786	-	442	119953082	-	BT0283	-	flagellar hook protein FlgE
277	 31.49	0	296791..297225	-	144	119953083	-	BT0284	-	basal-body rod modification protein FlgD
278	 25.73	0	297238..298407	-	389	119953084	-	BT0285	-	flagellar hook-length control protein
279	 31.54	0	298411..299025	-	204	119953085	-	BT0286	-	FlbB protein
280	 22.61	-1	299022..299450	-	142	119953086	-	BT0287	-	flagellar protein
281	 32.42	0	299447..300757	-	436	119953087	-	BT0288	-	flagellum-specific ATP synthase
282	 31.28	0	300771..301697	-	308	119953088	-	BT0289	-	flagellar assembly protein FliH
283	 33.52	+1	301706..302752	-	348	119953089	-	BT0290	-	flagellar motor switch protein FliG
284	 33.16	+1	302756..304462	-	568	119953090	-	BT0291	-	flagellar M-ring protein FliF
285	 28.79	0	304476..304805	-	109	119953091	-	BT0292	-	flagellar hook-basal body complex protein FliE
286	 37.47	+2	304821..305279	-	152	119953092	-	BT0293	-	flagellar basal-body rod protein FlgC
287	 30.43	0	305305..305718	-	137	119953093	-	BT0294	-	flagellar basal-body rod protein FlgB
288	 31.86	0	305746..307101	-	451	119953094	-	BT0295	-	ATP-dependent hsl protease ATP-binding subunit HslU
289	 34.25	+1	307098..307640	-	180	119953095	-	BT0296	-	ATP-dependent protease HslV
290	 30.16	0	307652..308596	-	314	119953096	-	BT0297	-	Smf protein
291	 29.13	0	308602..309291	-	229	119953097	-	BT0298	-	hypothetical protein
292	 35.99	+1	309292..310533	-	413	119953098	-	BT0299	-	cell division protein FtsZ
293	 34.94	+1	310509..311750	-	413	119953099	-	BT0300	-	cell division protein FtsA
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.