IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
111	 27.61	0	112175..112576	-	133	119952917	-	BT0115	-	SSU ribosomal protein S6P
112	 31.23	0	112908..114617	-	569	119952918	-	BT0116	-	PTS system, glucose-specific IIABC component
113	 30.71	0	114845..115531	+	228	119952919	-	BT0117	-	hypothetical protein
114	 26.71	0	115576..116859	-	427	119952920	-	BT0118	-	membrane metalloprotease
115	 27.90	0	116873..117829	-	318	119952921	-	BT0119	-	phosphatidate cytidylyltransferase
116	 30.30	0	117726..118418	-	230	119952922	-	BT0120	-	undecaprenyl pyrophosphate synthetase
117	 33.33	+1	118423..118977	-	184	119952923	-	BT0121	-	ribosome recycling factor
118	 31.90	0	119014..119850	-	278	119952924	-	BT0122	-	protein translation elongation factor Ts (EF-Ts)
119	 30.72	0	119868..120632	-	254	119952925	-	BT0123	-	SSU ribosomal protein S2P
120	 29.00	0	120668..121267	-	199	119952926	-	BT0123A	-	septum formation protein Maf
121	 22.58	-1	121257..121535	-	92	119952927	-	BT0124	-	hypothetical protein
122	 28.77	0	121550..122338	-	262	119952928	-	BT0125	-	hypothetical protein
123	 28.57	0	122345..122953	-	202	119952929	-	BT0126	-	hypothetical protein
124	 30.88	0	122940..124607	-	555	119952930	-	BT0127	-	SSU ribosomal protein S1P
125	 29.60	0	124604..125272	-	222	119952931	-	BT0128	-	cytidylate kinase
126	 29.97	0	125273..126016	-	247	119952932	-	BT0129	-	ribosomal large subunit pseudouridine synthase B
127	 22.55	-1	125988..126803	-	271	119952933	-	BT0130	-	hypothetical protein
128	 34.25	+1	126763..127854	-	363	119952934	-	BT0131	-	RecA protein
129	 28.45	0	127865..130567	-	900	119952935	-	BT0132	-	transcription elongation factor GreA
130	 28.68	0	130604..131548	-	314	119952936	-	BT0133	-	hypothetical protein
131	 26.18	0	131729..132874	+	381	119952937	-	BT0134	-	tetratricopeptide repeat family protein
132	 29.76	0	132920..134290	-	456	119952938	-	BT0135	-	histidyl-tRNA synthetase
133	 28.27	0	134433..136310	+	625	119952939	-	BT0136	-	cell division protein FtsI
134	 29.85	0	136312..138204	-	630	119952940	-	BT0137	-	long-chain-fatty-acid--CoA ligase
135	 30.07	0	138360..138665	-	101	119952941	-	BT0139	-	hypothetical protein
136	 31.54	0	138759..141944	-	1061	119952942	-	BT0140	-	acriflavin resistance plasma membrane protein
137	 31.39	0	141948..142925	-	325	119952943	-	BT0141	-	acriflavin resistance periplasmic protein
138	 28.34	0	142938..144218	-	426	119952944	-	BT0142	-	outer membrane protein TolC
139	 25.51	-1	144332..144625	+	97	119952945	-	BT0143	-	hypothetical cytosolic protein
140	 33.00	+1	144614..145510	-	298	119952946	-	BT0144	-	glycine betaine-binding protein
141	 29.22	0	145547..146446	-	299	119952947	-	BT0145	-	glycine betaine transport system permease protein
142	 28.78	0	146453..147571	-	372	119952948	-	BT0146	-	glycine betaine transport ATP-binding protein
143	 36.92	+2	147701..148705	-	334	119952949	-	BT0147	-	flagellin
144	 31.13	0	148827..150827	-	666	119952950	-	BT0149	-	flagellar hook-associated protein 2
145	 34.25	+1	151003..152208	+	401	119952951	-	BT0151	-	N-acetylglucosamine-6-phosphate deacetylase
146	 29.40	0	152205..153044	+	279	119952952	-	BT0152	-	glucosamine-6-phosphate isomerase
147	 30.59	0	153137..153829	-	230	119952953	-	BT0153	-	superoxide dismutase
148	 33.78	+1	153762..156470	-	902	119952954	-	BT0154	-	protein translocase subunit SecA
149	 26.63	0	156522..157655	+	377	119952955	-	BT0155	-	hypothetical protein
150	 24.18	-1	157678..158103	+	141	119952956	-	BT0156	-	hypothetical protein
151	 25.66	-1	158107..158523	+	138	119952957	-	BT0157	-	hypothetical protein
152	 25.79	0	158669..159769	+	366	119952958	-	BT0160	-	alanine racemase
153	 26.64	0	159761..161404	-	547	119952959	-	BT0161	-	hypothetical membrane associated protein
154	 29.76	0	161431..161598	+	55	119952960	-	BT0162	-	hypothetical protein
155	 26.99	0	161602..163350	-	582	119952961	-	BT0163	-	hypothetical protein
156	 25.53	-1	163422..164420	-	332	119952962	-	BT0164	-	sodium-calcium exchanger
157	 29.01	0	164422..166272	-	616	119952963	-	BT0165	-	hypothetical cytosolic protein
158	 30.09	0	166360..167841	-	493	119952964	-	BT0166	-	4-alpha-glucanotransferase
159	 26.77	0	168002..169159	+	385	119952965	-	BT0167	-	outer membrane protein
160	 27.86	0	169163..169546	-	127	119952966	-	BT0168	-	DnaK suppressor protein
161	 30.63	0	169714..169935	+	73	119952967	-	BT0169	-	bacterial protein translation initiation factor 1 (IF-1)
162	 26.88	0	169983..172028	-	681	119952968	-	BT0170	-	hypothetical protein
163	 30.10	0	171977..172564	-	195	119952969	-	BT0171	-	hypothetical cytosolic protein
164	 26.36	0	172546..173535	-	329	119952970	-	BT0172	-	hypothetical membrane spanning protein
165	 29.53	0	173532..174557	-	341	119952971	-	BT0173	-	hypothetical membrane spanning protein
166	 26.89	0	174520..175419	-	299	119952972	-	BT0174	-	hypothetical protein
167	 27.44	0	175416..176297	-	293	119952973	-	BT0175	-	hypothetical cytosolic protein
168	 35.65	+1	176313..177305	-	330	119952974	-	BT0176	-	MoxR protein
169	 29.01	0	177376..177999	-	207	119952975	-	BT0177	-	methyltransferase GidB
170	 33.97	+1	177996..179882	-	628	119952976	-	BT0178	-	putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit GidA
171	 31.40	0	179867..181261	-	464	119952977	-	BT0179	-	tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase
172	 24.85	-1	181397..181891	+	164	119952978	-	BT0180	-	flagellar protein FlbF
173	 32.38	0	181910..183793	+	627	119952979	-	BT0181	-	flagellar hook-associated protein 1
174	 31.84	0	183797..185071	+	424	119952980	-	BT0182	-	flagellar hook-associated protein 3
175	 26.72	0	185073..185465	+	130	119952981	-	BT0183	-	transmembrane protein
176	 22.78	-1	185468..185704	+	78	119952982	-	BT0184	-	carbon storage regulator
177	 27.75	0	185689..186351	-	220	119952983	-	BT0185	-	O-sialoglycoprotein endopeptidase
178	 27.74	0	186332..186760	-	142	119952984	-	BT0186	-	ATP/GTP hydrolase
179	 31.43	0	186757..187071	-	104	119952985	-	BT0187	-	hypothetical protein
180	 29.02	0	187221..187568	-	115	119952986	-	BT0188	-	LSU ribosomal protein L20P
181	 27.78	0	187590..187787	-	65	119952987	-	BT0189	-	LSU ribosomal protein L35P
182	 33.69	+1	187804..188364	-	186	119952988	-	BT0190	-	bacterial protein translation initiation factor 3 (IF-3)
183	 22.78	-1	188542..189204	+	220	119952989	-	BT0192	-	hypothetical protein
184	 19.68	-2	189204..189950	+	248	119952990	-	BT0193	-	hypothetical protein
185	 26.57	0	190041..190838	-	265	119952991	-	BT0194	-	sec-independent protein translocase protein TatD
186	 30.62	0	190835..191977	-	380	119952992	-	BT0195	-	tetratricopeptide repeat family protein
187	 31.10	0	192275..193348	+	357	119952993	-	BT0196	-	bacterial peptide chain release factor 1
188	 26.02	0	193358..194191	+	277	119952994	-	BT0197	-	peptide release factor-glutamine N5-methyltransferase
189	 28.49	0	194175..196178	+	667	119952995	-	BT0198	-	guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
190	 22.19	-1	196168..198411	+	747	119952996	-	BT0199	-	pili chemotaxis protein CheA-like PilL
191	 30.15	0	198408..199505	-	365	119952997	-	BT0200	-	D-alanine--D-alanine ligase
192	 29.98	0	199507..201027	-	506	119952998	-	BT0201	-	UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase
193	 29.31	0	201335..202576	+	413	119952999	-	BT0202	-	magnesium and cobalt efflux protein CorC
194	 28.51	0	202602..203534	+	310	119953000	-	BT0203	-	protease activity modulator HflK
195	 30.66	0	203536..204507	+	323	119953001	-	BT0204	-	protease activity modulator HflC
196	 26.89	0	205033..206661	+	542	119953002	-	BT0205	-	hypothetical protein
197	 29.30	0	206667..207212	-	181	119953003	-	BT0206	-	methyltransferase
198	 29.84	0	207298..208128	+	276	119953004	-	BT0207	-	UTP--glucose-1-phosphate uridylyltransferase
199	 21.89	-2	208129..209814	+	561	119953005	-	BT0208	-	hypothetical protein
200	 28.24	0	209891..211579	+	562	119953006	-	BT0209	-	mucin 2 precursor
201	 26.51	0	211572..213929	+	785	119953007	-	BT0210	-	surface-located membrane protein 1
202	 28.33	0	213926..215764	+	612	119953008	-	BT0211	-	DNA mismatch repair protein MutL
203	 22.00	-2	215785..216825	+	346	119953009	-	BT0212	-	hypothetical protein
204	 25.11	-1	217000..217656	-	218	119953010	-	BT0213	-	hypothetical protein
205	 33.68	+1	217634..218212	-	192	119953011	-	BT0214	-	protein translation elongation factor P (EF-P)
206	 30.68	0	218279..219184	+	301	119953012	-	BT0215	-	phosphate-binding protein
207	 31.35	0	219268..220176	+	302	119953013	-	BT0216	-	phosphate transport system permease protein PstC
208	 27.50	0	220173..221714	+	513	119953014	-	BT0217	-	phosphate transport system permease protein PstA
209	 31.11	0	221715..222479	+	254	119953015	-	BT0218	-	phosphate transport ATP-binding protein PstB
210	 34.06	+1	222480..223301	-	273	119953016	-	BT0219	-	zinc uptake transporter
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.