IslandPath Analysis: Borrelia turicatae 91E135



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.24   STD DEV: 3.53
Borrelia turicatae 91E135, complete genome - 1..917330
818 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
55	 27.44	0	53033..55018	-	661	119952861	-	BT0058	-	tetratricopeptide repeat family protein
56	 29.49	0	55015..55794	-	259	119952862	-	BT0059	-	magnesium and cobalt efflux protein CorC
57	 28.41	0	55791..56237	-	148	119952863	-	BT0060	-	hypothetical metal-binding protein
58	 30.23	0	56326..56679	-	117	119952864	-	BT0061	-	thioredoxin
59	 26.14	0	56753..57475	+	240	119952865	-	BT0062	-	hypothetical protein
60	 29.78	0	57596..58636	-	346	119952866	-	BT0063	-	serine/threonine protein kinase
61	 30.43	0	58673..59602	-	309	119952867	-	BT0064	-	methionyl-tRNA formyltransferase
62	 30.72	0	59599..60096	-	165	119952868	-	BT0065	-	peptide deformylase
63	 27.83	0	60120..60809	-	229	119952869	-	BT0066	-	hypothetical protein
64	 30.75	0	60806..62584	-	592	119952870	-	BT0067	-	Xaa-Pro aminopeptidase
65	 27.16	0	62706..63596	+	296	119952871	-	BT0068	-	hydrolase (HAD superfamily)
66	 29.62	0	63610..64848	+	412	119952872	-	BT0069	-	aminopeptidase
67	 30.56	0	64866..65333	+	155	119952873	-	BT0070	-	hypothetical membrane spanning protein
68	 24.01	-1	65356..66825	+	489	119952874	-	BT0071	-	hypothetical protein
69	 24.53	-1	66822..69128	+	768	119952875	-	BT0072	-	hypothetical protein
70	 21.40	-2	69132..69701	+	189	119952876	-	BT0073	-	hypothetical protein
71	 31.17	0	69717..70778	+	353	119952877	-	BT0074	-	bacterial peptide chain release factor 2
72	 25.66	-1	70760..72166	+	468	119952878	-	BT0075	-	hypothetical protein
73	 27.25	0	72208..73062	+	284	119952879	-	BT0076	-	cell division protein FtsY
74	 22.32	-1	73059..74093	+	344	119952880	-	BT0077	-	hypothetical protein
75	 24.04	-1	74105..75352	+	415	119952881	-	BT0078	-	cell division protein FtsX
76	 27.17	0	75353..76033	+	226	119952882	-	BT0080	-	lipoprotein releasing system ATP-binding protein LolD
77	 22.78	-1	76030..77280	+	416	119952883	-	BT0081	-	lipoprotein releasing system transmembrane protein LolE
78	 28.50	0	77310..78593	-	427	119952884	-	BT0082	-	hypothetical protein
79	 27.36	0	78586..78903	-	105	119952885	-	BT0083	-	hypothetical protein
80	 28.29	0	79100..80368	+	422	119952886	-	BT0084	-	cysteine desulfhydrase
81	 23.46	-1	80539..80943	+	134	119952887	-	BT0085	-	NifU-like protein
82	 31.57	0	80966..82495	+	509	119952888	-	BT0086	-	magnesium chelatase subunit ChlI-related ATPase
83	 31.02	0	82518..83468	-	316	119952889	-	BT0087	-	L-lactate dehydrogenase
84	 32.23	0	83651..85456	-	601	119952890	-	BT0088	-	GTP-binding protein LepA
85	 26.33	0	85497..86510	-	337	119952891	-	BT0089	-	tetratricopeptide repeat family protein
86	 39.54	+2	86547..86981	-	144	119952892	-	BT0090	-	V-type sodium ATP synthase subunit K
87	 30.04	0	87003..88823	-	606	119952893	-	BT0091	-	V-type sodium ATP synthase subunit I
88	 31.08	0	88834..89454	-	206	119952894	-	BT0092	-	V-type sodium ATP synthase subunit D
89	 35.33	+1	89433..90734	-	433	119952895	-	BT0093	-	V-type sodium ATP synthase subunit B
90	 36.28	+1	90744..92474	-	576	119952896	-	BT0094	-	V-type sodium ATP synthase alpha chain
91	 28.75	0	92486..93031	-	181	119952897	-	BT0095	-	hypothetical protein
92	 30.32	0	93042..93638	-	198	119952898	-	BT0096	-	V-type sodium ATP synthase subunit E
93	 31.06	0	93749..94144	-	131	119952899	-	BT0097	-	hypothetical protein
94	 27.74	0	94145..96505	-	786	119952900	-	BT0098	-	DNA mismatch repair protein MutS
95	 29.62	0	96453..97394	-	313	119952901	-	BT0099	-	GTPase
96	 27.58	0	97391..98155	-	254	119952902	-	BT0100	-	glutamate racemase
97	 30.74	0	98298..99683	+	461	119952903	-	BT0101	-	asparaginyl-tRNA synthetase
98	 22.80	-1	99707..100285	+	192	119952904	-	BT0102	-	hypothetical protein
99	 26.90	0	100282..100872	-	196	119952905	-	BT0103	-	phosphoribosyltransferase
100	 32.99	+1	101226..102683	-	485	119952906	-	BT0104	-	protease Do
101	 33.33	+1	102727..103479	-	250	119952907	-	BT0105	-	methionine aminopeptidase
102	 26.74	0	103484..105136	-	550	119952908	-	BT0106	-	hypothetical protein
103	 27.21	0	105123..105563	-	146	119952909	-	BT0107	-	N utilization substance protein B
104	 30.82	0	105583..106617	-	344	119952910	-	BT0108	-	basic membrane protein
105	 34.00	+1	106688..107893	-	401	119952911	-	BT0109	-	acetyl-CoA acetyltransferase
106	 25.88	0	108057..109412	+	451	119952912	-	BT0110	-	hypothetical protein
107	 32.32	0	109514..110899	-	461	119952913	-	BT0111	-	replicative DNA helicase
108	 27.31	0	110916..111413	-	165	119952914	-	BT0112	-	LSU ribosomal protein L9P
109	 32.65	0	111420..111713	-	97	119952915	-	BT0113	-	SSU ribosomal protein S18P
110	 34.25	+1	111726..112163	-	145	119952916	-	BT0114	-	single-strand DNA binding protein
111	 27.61	0	112175..112576	-	133	119952917	-	BT0115	-	SSU ribosomal protein S6P
112	 31.23	0	112908..114617	-	569	119952918	-	BT0116	-	PTS system, glucose-specific IIABC component
113	 30.71	0	114845..115531	+	228	119952919	-	BT0117	-	hypothetical protein
114	 26.71	0	115576..116859	-	427	119952920	-	BT0118	-	membrane metalloprotease
115	 27.90	0	116873..117829	-	318	119952921	-	BT0119	-	phosphatidate cytidylyltransferase
116	 30.30	0	117726..118418	-	230	119952922	-	BT0120	-	undecaprenyl pyrophosphate synthetase
117	 33.33	+1	118423..118977	-	184	119952923	-	BT0121	-	ribosome recycling factor
118	 31.90	0	119014..119850	-	278	119952924	-	BT0122	-	protein translation elongation factor Ts (EF-Ts)
119	 30.72	0	119868..120632	-	254	119952925	-	BT0123	-	SSU ribosomal protein S2P
120	 29.00	0	120668..121267	-	199	119952926	-	BT0123A	-	septum formation protein Maf
121	 22.58	-1	121257..121535	-	92	119952927	-	BT0124	-	hypothetical protein
122	 28.77	0	121550..122338	-	262	119952928	-	BT0125	-	hypothetical protein
123	 28.57	0	122345..122953	-	202	119952929	-	BT0126	-	hypothetical protein
124	 30.88	0	122940..124607	-	555	119952930	-	BT0127	-	SSU ribosomal protein S1P
125	 29.60	0	124604..125272	-	222	119952931	-	BT0128	-	cytidylate kinase
126	 29.97	0	125273..126016	-	247	119952932	-	BT0129	-	ribosomal large subunit pseudouridine synthase B
127	 22.55	-1	125988..126803	-	271	119952933	-	BT0130	-	hypothetical protein
128	 34.25	+1	126763..127854	-	363	119952934	-	BT0131	-	RecA protein
129	 28.45	0	127865..130567	-	900	119952935	-	BT0132	-	transcription elongation factor GreA
130	 28.68	0	130604..131548	-	314	119952936	-	BT0133	-	hypothetical protein
131	 26.18	0	131729..132874	+	381	119952937	-	BT0134	-	tetratricopeptide repeat family protein
132	 29.76	0	132920..134290	-	456	119952938	-	BT0135	-	histidyl-tRNA synthetase
133	 28.27	0	134433..136310	+	625	119952939	-	BT0136	-	cell division protein FtsI
134	 29.85	0	136312..138204	-	630	119952940	-	BT0137	-	long-chain-fatty-acid--CoA ligase
135	 30.07	0	138360..138665	-	101	119952941	-	BT0139	-	hypothetical protein
136	 31.54	0	138759..141944	-	1061	119952942	-	BT0140	-	acriflavin resistance plasma membrane protein
137	 31.39	0	141948..142925	-	325	119952943	-	BT0141	-	acriflavin resistance periplasmic protein
138	 28.34	0	142938..144218	-	426	119952944	-	BT0142	-	outer membrane protein TolC
139	 25.51	-1	144332..144625	+	97	119952945	-	BT0143	-	hypothetical cytosolic protein
140	 33.00	+1	144614..145510	-	298	119952946	-	BT0144	-	glycine betaine-binding protein
141	 29.22	0	145547..146446	-	299	119952947	-	BT0145	-	glycine betaine transport system permease protein
142	 28.78	0	146453..147571	-	372	119952948	-	BT0146	-	glycine betaine transport ATP-binding protein
143	 36.92	+2	147701..148705	-	334	119952949	-	BT0147	-	flagellin
144	 31.13	0	148827..150827	-	666	119952950	-	BT0149	-	flagellar hook-associated protein 2
145	 34.25	+1	151003..152208	+	401	119952951	-	BT0151	-	N-acetylglucosamine-6-phosphate deacetylase
146	 29.40	0	152205..153044	+	279	119952952	-	BT0152	-	glucosamine-6-phosphate isomerase
147	 30.59	0	153137..153829	-	230	119952953	-	BT0153	-	superoxide dismutase
148	 33.78	+1	153762..156470	-	902	119952954	-	BT0154	-	protein translocase subunit SecA
149	 26.63	0	156522..157655	+	377	119952955	-	BT0155	-	hypothetical protein
150	 24.18	-1	157678..158103	+	141	119952956	-	BT0156	-	hypothetical protein
151	 25.66	-1	158107..158523	+	138	119952957	-	BT0157	-	hypothetical protein
152	 25.79	0	158669..159769	+	366	119952958	-	BT0160	-	alanine racemase
153	 26.64	0	159761..161404	-	547	119952959	-	BT0161	-	hypothetical membrane associated protein
154	 29.76	0	161431..161598	+	55	119952960	-	BT0162	-	hypothetical protein
29.24	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.