IslandPath Analysis: Borrelia burgdorferi B31



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 28.42   STD DEV: 3.85
Borrelia burgdorferi B31, complete genome - 1..910724
851 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
215	 28.71	0	219797..220639	+	280	15594560	-	BB0215	-	phosphate ABC transporter, periplasmic phosphate-binding protein (pstS)
216	 30.14	0	220729..221637	+	302	15594561	-	BB0216	-	phosphate ABC transporter, permease protein (pstC)
217	 28.88	0	222192..223178	+	328	15594562	-	BB0217	-	phosphate ABC transporter, permease protein (pstA)
218	 32.44	+1	223179..223961	+	260	15594563	-	BB0218	-	phosphate ABC transporter, ATP-binding protein (pstB)
219	 35.28	+1	223964..224785	-	273	15594564	-	BB0219	-	gufA protein
220	 32.83	+1	224826..226610	-	594	15594565	-	BB0220	-	alanyl-tRNA synthetase
221	 26.98	0	226610..227836	-	408	15594566	-	BB0221	-	flagellar motor switch protein (fliG-1)
222	 27.68	0	227814..228521	-	235	15594567	-	BB0222	-	glucose-6-phosphate 1-dehydrogenase, putative
223	 23.16	-1	228542..228895	-	117	15594568	-	BB0223	-	hypothetical protein
224	 25.96	0	228864..229148	-	94	15594569	-	BB0224	-	hypothetical protein
225	 28.17	0	229217..230224	+	335	15594570	-	BB0225	-	tRNA-dihydrouridine synthase A
226	 31.22	0	230214..231491	-	425	15594571	-	BB0226	-	seryl-tRNA synthetase
227	 24.07	-1	231621..232322	+	233	15594572	-	BB0227	-	hypothetical protein
228	 27.06	0	232338..235253	+	971	15594573	-	BB0228	-	hypothetical protein
229	 29.67	0	235289..235534	-	81	15594574	rpmE2	BB0229	-	50S ribosomal protein L31 type B
230	 31.98	0	235595..237142	-	515	15594575	rho	BB0230	-	transcription termination factor Rho
231	 28.43	0	237222..237629	-	135	15594576	-	BB0231	-	hypothetical protein
232	 31.80	0	237630..237956	-	108	15594577	-	BB0232	-	hbbU protein
233	 29.07	0	237969..238226	-	85	161511081	rpsT	BB0233	-	30S ribosomal protein S20
234	 20.17	-2	238301..239128	-	275	15594579	-	BB0234	-	hypothetical protein
235	 31.07	0	239144..240250	-	368	15594580	-	BB0235	-	translation-associated GTPase
236	 29.65	0	240283..242289	-	668	15594581	-	BB0236	-	hypothetical protein
237	 30.78	0	242438..244003	+	521	15594582	lnt	BB0237	-	apolipoprotein N-acyltransferase
238	 28.52	0	243943..244731	-	262	15594583	-	BB0238	-	hypothetical protein
239	 28.80	0	244777..245394	-	205	15594584	-	BB0239	-	deoxyguanosine/deoxyadenosine kinase(I) subunit 2 (dck)
240	 34.25	+1	245790..246554	+	254	15594585	-	BB0240	-	glycerol uptake facilitator (glpF)
241	 36.72	+2	246597..248102	+	501	15594586	-	BB0241	-	glycerol kinase (glpK)
242	 21.51	-1	248156..248434	+	92	15594587	-	BB0242	-	hypothetical protein
243	 30.11	0	248506..250089	+	527	15594588	-	BB0243	-	glycerol-3-phosphate dehydrogenase, anaerobic (glpA)
244	 29.49	0	250176..250670	-	164	15594589	-	BB0244	-	hypothetical protein
245	 30.09	0	250657..251211	-	184	15594590	-	BB0245	-	hypothetical protein
246	 31.19	0	251212..252237	-	341	15594591	-	BB0246	-	hypothetical protein
247	 23.60	-1	252434..253039	+	201	15594592	-	BB0247	-	hypothetical protein
248	 27.75	0	253159..254931	+	590	15594593	-	BB0248	-	oligoendopeptidase F (pepF)
249	 28.37	0	254945..255649	+	234	15594594	-	BB0249	-	phosphatidyltransferase
250	 25.04	0	255646..256260	+	204	15594595	-	BB0250	-	dedA protein (dedA)
251	 31.83	0	256463..258985	+	840	15594596	leuS	BB0251	-	leucyl-tRNA synthetase
252	 26.95	0	259000..261303	+	767	15594597	-	BB0252	-	hypothetical protein
253	 32.01	0	261292..263712	-	806	15594598	-	BB0253	-	ATP-dependent protease LA (lon-1)
254	 25.53	0	263988..266114	+	708	15594599	-	BB0254	-	single-stranded-DNA-specific exonuclease (recJ)
255	 28.74	0	266095..267051	+	318	15594600	-	BB0255	-	hypothetical protein
256	 27.62	0	267066..267275	+	69	15594601	rpsU	BB0256	-	30S ribosomal protein S21
257	 28.85	0	267313..269676	-	787	15594602	-	BB0257	-	cell division protein, putative
258	 24.97	0	269673..270473	-	266	15594603	uppP	BB0258	-	undecaprenyl pyrophosphate phosphatase
259	 26.65	0	270488..272701	-	737	15594604	-	BB0259	-	hypothetical protein
260	 25.64	0	272634..273647	-	337	15594605	-	BB0260	-	hypothetical protein
261	 24.95	0	273854..275236	+	460	15594606	-	BB0261	-	hypothetical protein
262	 27.19	0	275243..276496	-	417	15594607	-	BB0262	-	hypothetical protein
263	 25.25	0	276558..277064	+	168	15594608	-	BB0263	-	signal peptidase I (lepB-3)
264	 30.62	0	277090..278565	-	491	15594609	-	BB0264	-	heat shock protein 70 (dnaK-1)
265	 25.29	0	278537..279058	-	173	15594610	-	BB0265	-	hypothetical protein
266	 25.89	0	279078..279386	-	102	15594611	-	BB0266	-	hypothetical protein
267	 31.97	0	279407..281311	-	634	15594612	-	BB0267	-	hypothetical protein
268	 27.29	0	281314..281793	-	159	15594613	-	BB0268	-	hypothetical protein
269	 30.97	0	281800..282687	-	295	15594614	-	BB0269	-	ATP-binding protein (ylxH-1)
270	 29.13	0	282699..283865	-	388	15594615	-	BB0270	-	flagellar biosynthesis regulator FlhF
271	 32.86	+1	283869..285962	-	697	15594616	flhA	BB0271	-	flagellar biosynthesis protein FlhA
272	 30.74	0	285971..287089	-	372	15594617	flhB	BB0272	-	flagellar biosynthesis protein FlhB
273	 25.06	0	287089..287898	-	269	15594618	-	BB0273	-	flagellar biosynthesis protein (fliR)
274	 26.52	0	287910..288173	-	87	15594619	-	BB0274	-	flagellar biosynthesis protein (fliQ)
275	 29.93	0	288182..288946	-	254	15594620	fliP	BB0275	-	flagellar biosynthesis protein FliP
276	 25.52	0	288957..289583	-	208	15594621	-	BB0276	-	flagellar biosynthesis protein FliZ
277	 35.67	+1	289576..289917	-	113	15594622	-	BB0277	-	flagellar motor switch protein (fliN)
278	 33.52	+1	289963..291021	-	352	15594623	fliM	BB0278	-	flagellar motor switch protein FliM
279	 30.35	0	291059..291595	-	178	15594624	fliL	BB0279	-	flagellar basal body-associated protein FliL
280	 32.18	0	291644..292426	-	260	15594625	motB	BB0280	-	flagellar motor protein MotB
281	 34.48	+1	292426..293208	-	260	15594626	-	BB0281	-	flagellar motor rotation protein A (motA)
282	 29.78	0	293205..293429	-	74	15594627	-	BB0282	-	flagellar protein (flbD)
283	 36.42	+2	293452..294780	-	442	15594628	flgE	BB0283	-	flagellar hook protein FlgE
284	 29.50	0	294785..295228	-	147	15594629	flgD	BB0284	-	flagellar basal body rod modification protein
285	 24.22	-1	295242..296426	-	394	15594630	-	BB0285	-	flagellar protein (flbC)
286	 27.72	0	296428..297051	-	207	15594631	-	BB0286	-	flagellar protein (flbB)
287	 22.45	-1	297038..297469	-	143	15594632	-	BB0287	-	flagellar protein (flbA)
288	 32.49	+1	297466..298776	-	436	15594633	-	BB0288	-	flagellum-specific ATP synthase (fliI)
289	 31.38	0	298795..299715	-	306	15594634	fliH	BB0289	-	flagellar assembly protein H
290	 34.30	+1	299730..300764	-	344	15594635	fliG	BB0290	-	flagellar motor switch protein G
291	 33.86	+1	300780..302489	-	569	15594636	fliF	BB0291	-	flagellar MS-ring protein
292	 29.17	0	302504..302839	-	111	15594637	fliE	BB0292	-	flagellar hook-basal body protein FliE
293	 35.51	+1	302851..303309	-	152	15594638	flgC	BB0293	-	flagellar basal body rod protein FlgC
294	 27.45	0	303333..303740	-	135	15594639	flgB	BB0294	-	flagellar basal body rod protein FlgB
295	 30.41	0	303774..305141	-	455	15594640	hslU	BB0295	-	ATP-dependent protease ATP-binding subunit
296	 34.97	+1	305113..305661	-	182	15594641	-	BB0296	-	ATP-dependent protease peptidase subunit
297	 29.64	0	305671..306618	-	315	15594642	-	BB0297	-	smg protein
298	 26.12	0	306625..307317	-	230	15594643	-	BB0298	-	hypothetical protein
299	 37.94	+2	307318..308532	-	404	15594644	-	BB0299	-	cell division protein FtsZ
300	 35.43	+1	308539..309780	-	413	15594645	-	BB0300	-	cell division protein (ftsA)
301	 24.33	-1	309780..310523	-	247	15594646	-	BB0301	-	cell division protein (divIB)
302	 29.13	0	310559..311653	-	364	15594647	-	BB0302	-	cell division protein (ftsW)
303	 30.40	0	311660..312715	-	351	15594648	-	BB0303	-	phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY)
304	 28.32	0	312729..314123	-	464	15594649	-	BB0304	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (murF)
305	 22.70	-1	314146..314427	-	93	15594650	-	BB0305	-	hypothetical protein
306	 29.29	0	314424..315314	-	296	15594651	-	BB0306	-	hypothetical protein
307	 23.89	-1	315307..316143	-	278	15594652	-	BB0307	-	hypothetical protein
308	 21.36	-1	316140..317216	-	358	15594653	-	BB0308	-	hypothetical protein
309	 26.54	0	317247..318026	-	259	15594654	-	BB0309	-	hypothetical protein
310	 22.46	-1	318119..318256	-	45	15594655	-	BB0310	-	hypothetical protein
311	 28.34	0	318277..319158	-	293	15594656	-	BB0311	-	hypothetical protein
312	 29.76	0	319106..319636	-	176	15594657	-	BB0312	-	purine-binding chemotaxis protein (cheW-1)
313	 27.98	0	319680..320258	-	192	15594658	-	BB0313	-	cell division protein (ftsJ)
314	 24.62	0	320309..321352	+	347	15594659	-	BB0314	-	octaprenyl-diphosphate synthase (ispB)
28.42	MEAN

3.85	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.