version 1.0
Bacteroides thetaiotaomicron VPI-5482, complete genome - 1..6260361 4778 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3922 49.79 +1 5097042..5099138 + 698 29349332 - BT_3924 - ATP-dependent DNA helicase recG 3923 44.95 0 5099362..5099826 + 154 29349333 - BT_3925 - nucleoside diphosphate kinase 3924 46.96 0 5099845..5100717 + 290 29349334 - BT_3926 - putative peptidase 3925 44.20 0 5100827..5101369 + 180 29349335 - BT_3927 - hypothetical protein 3926 46.80 0 5101644..5102675 + 343 29349336 - BT_3928 - hypothetical protein 3927 45.85 0 5102705..5103463 + 252 29349337 tpiA BT_3929 - triosephosphate isomerase 3928 47.56 0 5103590..5104039 + 149 29349338 - BT_3930 - hypothetical protein 3929 44.67 0 5104047..5104637 + 196 29349339 folE BT_3931 - GTP cyclohydrolase I 3930 49.11 +1 5104729..5106921 - 730 29349340 - BT_3932 - DNA primase 3931 47.80 0 5107036..5107809 - 257 29349341 - BT_3933 - chorismate mutase/prephenate dehydratase (tyrA) 3932 50.09 +1 5108026..5109087 - 353 29349342 - BT_3934 - putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase 3933 49.24 +1 5109180..5110361 - 393 29349343 - BT_3935 - aminotransferase 3934 45.94 0 5110336..5111184 - 282 29349344 - BT_3936 - prephenate dehydratase 3935 48.39 0 5111535..5112497 - 320 29349345 - BT_3937 - TPR domain-containing protein 3936 49.24 +1 5112537..5114441 - 634 29349346 - BT_3938 - ATP-dependent DNA helicase recQ 3937 48.34 0 5114434..5116152 - 572 29349347 - BT_3939 - single-stranded-DNA-specific exonuclease recJ 3938 32.37 -2 5116702..5116908 + 68 29349348 - BT_3940 - hypothetical protein 3939 43.15 0 5116942..5117868 + 308 29349349 - BT_3941 - hypothetical protein 3940 44.52 0 5118058..5118495 - 145 29349350 - BT_3942 - hypothetical protein 3941 47.34 0 5118574..5119137 + 187 29349351 - BT_3943 - putative translation factor 3942 46.97 0 5119138..5120934 + 598 29349352 - BT_3944 - putative chloride channel protein 3943 48.71 +1 5120937..5121905 + 322 29349353 fmt BT_3945 - methionyl-tRNA formyltransferase 3944 46.24 0 5121958..5122608 + 216 29349354 - BT_3946 - ribulose-phosphate 3-epimerase 3945 44.79 0 5122617..5124719 + 700 29349355 - BT_3947 - competence protein 3946 43.35 0 5124765..5125802 + 345 29349356 - BT_3948 - putative exopolyphosphatase-like protein 3947 41.09 0 5125921..5126565 + 214 29349357 - BT_3949 - hypothetical protein 3948 46.65 0 5126595..5127983 + 462 29349358 - BT_3950 - phosphoglucomutase/phosphomannomutase 3949 42.67 0 5128179..5132153 + 1324 29349359 - BT_3951 - transcriptional regulator 3950 46.95 0 5132450..5135593 + 1047 29349360 - BT_3952 - hypothetical protein 3951 48.52 +1 5135654..5137549 + 631 29349361 - BT_3953 - putative outer membrane protein 3952 48.16 0 5137587..5138942 + 451 29349362 - BT_3954 - hypothetical protein 3953 46.49 0 5138970..5140322 + 450 29349363 - BT_3955 - hypothetical protein 3954 46.91 0 5140401..5141792 + 463 29349364 - BT_3956 - hypothetical protein 3955 40.07 0 5142097..5146044 + 1315 29349365 - BT_3957 - transcriptional regulator 3956 42.34 0 5146676..5149828 + 1050 29349366 - BT_3958 - hypothetical protein 3957 43.16 0 5149853..5151817 + 654 29349367 - BT_3959 - putative outer membrane protein 3958 44.60 0 5151875..5153401 + 508 29349368 - BT_3960 - hypothetical protein 3959 40.37 0 5153427..5154662 + 411 29349369 - BT_3961 - hypothetical protein 3960 46.54 0 5154944..5157229 + 761 29349370 - BT_3962 - putative sugar hydrolase 3961 46.88 0 5157236..5159575 + 779 29349371 - BT_3963 - putative sugar hydrolase 3962 47.04 0 5159605..5160399 + 264 29349372 - BT_3964 - putative secretory protein 3963 47.25 0 5160482..5162752 + 756 29349373 - BT_3965 - hypothetical protein 3964 44.07 0 5162880..5163671 - 263 29349374 - BT_3966 - two-component system response regulator 3965 47.12 0 5163689..5164747 - 352 29349375 - BT_3967 - putative two-component system sensor protein histidine kinase 3966 50.86 +1 5164810..5165739 - 309 29349376 - BT_3968 - cation efflux system protein 3967 51.96 +1 5165823..5170148 - 1441 29349377 - BT_3969 - cation efflux system protein, AcrB/AcrD/AcrF family protein 3968 40.03 0 5171025..5171741 - 238 29349378 - BT_3970 - hypothetical protein 3969 43.46 0 5172133..5172675 + 180 29349379 - BT_3971 - glutathione peroxidase 3970 47.70 0 5172653..5173195 - 180 29349380 - BT_3972 - putative NTP pyrophosphohydrolase 3971 49.30 +1 5173216..5174436 - 406 29349381 - BT_3973 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3972 40.25 0 5174933..5175727 + 264 29349382 - BT_3974 - hypothetical protein 3973 46.52 0 5175851..5176912 - 353 29349383 - BT_3975 - 3-dehydroquinate synthase 3974 40.49 0 5176993..5177397 + 134 29349384 - BT_3976 - hypothetical protein 3975 38.06 -1 5177478..5180291 + 937 29349385 - BT_3977 - hypothetical protein 3976 43.61 0 5180435..5181874 + 479 29349386 - BT_3978 - putative cardiolipin synthetase 3977 40.26 0 5181909..5182442 - 177 29349387 - BT_3979 - putative methyltransferase 3978 38.91 0 5182433..5183203 - 256 29349388 - BT_3980 - hypothetical protein 3979 37.99 -1 5183203..5183889 - 228 29349389 - BT_3981 - hypothetical protein 3980 41.37 0 5183985..5185403 + 472 29349390 - BT_3982 - exonuclease V subunit alpha 3981 39.76 0 5185604..5189011 + 1135 29349391 - BT_3983 - hypothetical protein 3982 43.43 0 5189028..5190641 + 537 29349392 - BT_3984 - hypothetical protein 3983 41.32 0 5190666..5191742 + 358 29349393 - BT_3985 - hypothetical protein 3984 40.17 0 5191751..5192905 + 384 29349394 - BT_3986 - putative patatin-like protein 3985 41.09 0 5192939..5194369 + 476 29349395 - BT_3987 - endo-beta-N-acetylglucosaminidase F1 precursor 3986 38.73 0 5194400..5195734 + 444 29349396 - BT_3988 - putative peptidoglycan bound protein 3987 40.69 0 5196004..5196438 - 144 29349397 - BT_3989 - hypothetical protein 3988 46.60 0 5196633..5198900 - 755 29349398 - BT_3990 - putative alpha-1,2-mannosidase 3989 50.24 +1 5198998..5201274 - 758 29349399 - BT_3991 - putative alpha-1,2-mannosidase 3990 46.34 0 5201306..5202235 - 309 29349400 - BT_3992 - putative anti-sigma factor 3991 45.77 0 5202354..5202908 - 184 29349401 - BT_3993 - RNA polymerase ECF-type sigma factor 3992 48.79 +1 5202936..5205167 - 743 29349402 - BT_3994 - putative alpha-1,2-mannosidase 3993 48.87 +1 5205400..5208018 - 872 29349403 alaS BT_3995 - alanyl-tRNA synthetase 3994 47.88 0 5208126..5209094 + 322 29349404 - BT_3996 - putative peptidase 3995 46.49 0 5209116..5209457 + 113 29349405 - BT_3997 - transcriptional regulator 3996 45.99 0 5209459..5211702 - 747 29349406 - BT_3998 - GTP pyrophosphokinase 3997 45.06 0 5211775..5213070 - 431 29349407 - BT_3999 - membrane-bound lytic murein transglycosylase D presursor 3998 45.05 0 5213104..5213991 - 295 29349408 - BT_4000 - hypothetical protein 3999 46.80 0 5213992..5214882 - 296 29349409 - BT_4001 - putative chromosome partitioning protein parB 4000 43.46 0 5214894..5215841 - 315 29349410 - BT_4002 - ParaA family ATPase 4001 47.05 0 5216019..5216798 + 259 29349411 surE BT_4003 - stationary phase survival protein SurE 4002 45.03 0 5216850..5217986 + 378 29349412 - BT_4004 - lipid-A-disaccharide synthase 4003 41.96 0 5218078..5218854 + 258 29349413 - BT_4005 - hypothetical protein 4004 44.96 0 5218967..5219809 - 280 29349414 - BT_4006 - phosphatidate cytidylyltransferase 4005 47.78 0 5219826..5221916 - 696 29349415 - BT_4007 - metalloprotease FtsH 4006 39.44 0 5221980..5222339 - 119 29349416 - BT_4008 - hypothetical protein 4007 41.60 0 5222847..5223959 + 370 29349417 - BT_4009 - integrase 4008 33.05 -1 5224188..5225576 + 462 29349418 - BT_4010 - hypothetical protein 4009 33.10 -1 5225581..5226441 + 286 29349419 - BT_4011 - DNA-methyltransferase 4010 34.11 -1 5226723..5228003 + 426 29349420 - BT_4012 - putative ABC oligo/dipeptide transport, ATP-binding protein 4011 44.94 0 5228099..5232097 - 1332 29349421 - BT_4013 - restriction endonuclease 4012 44.74 0 5232104..5233120 - 338 29349422 - BT_4014 - putative type II restriction endonuclease 4013 44.25 0 5233402..5234610 - 402 29349423 - BT_4015 - transposase 4014 47.75 0 5234612..5235034 - 140 29349424 - BT_4016 - hypothetical protein 4015 43.99 0 5235040..5235330 - 96 29349425 - BT_4017 - hypothetical protein 4016 53.85 +2 5235315..5235782 - 155 29349426 - BT_4018 - hypothetical protein 4017 48.30 0 5236440..5236880 - 146 29349427 - BT_4019 - hypothetical protein 4018 42.40 0 5237118..5237492 - 124 29349428 - BT_4020 - hypothetical protein 4019 46.45 0 5237521..5238732 - 403 29349429 - BT_4021 - integrase 4020 46.91 0 5238754..5239983 - 409 29349430 - BT_4022 - integrase 4021 41.18 0 5240134..5240490 + 118 29349431 - BT_4023 - transposase 43.33 MEAN 5.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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