version 1.0
Bacteroides thetaiotaomicron VPI-5482, complete genome - 1..6260361 4778 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3871 44.94 0 5046657..5048060 + 467 29349281 asnC BT_3873 - asparaginyl-tRNA synthetase 3872 40.04 0 5048200..5048691 + 163 29349282 - BT_3874 - hypothetical protein 3873 40.04 0 5048996..5049457 + 153 29349283 rplM BT_3875 - 50S ribosomal protein L13 3874 45.22 0 5049464..5049850 + 128 29349284 rpsI BT_3876 - 30S ribosomal protein S9 3875 42.41 0 5049972..5050808 + 278 29349285 rpsB BT_3877 - 30S ribosomal protein S2 3876 43.40 0 5050934..5051926 + 330 29349286 tsf BT_3878 - elongation factor Ts 3877 42.74 0 5051985..5052335 - 116 29349287 - BT_3879 - putative translation initiation factor SUI1 3878 44.85 0 5052444..5053025 + 193 29349288 - BT_3880 - hypothetical protein 3879 47.06 0 5052952..5054124 + 390 29349289 - BT_3881 - hypothetical protein 3880 47.51 0 5054213..5054875 + 220 29349290 - BT_3882 - redox-sensing transcriptional repressor Rex 3881 46.50 0 5054875..5055489 + 204 29349291 - BT_3883 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 3882 48.54 +1 5055529..5056008 + 159 29349292 - BT_3884 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3883 48.41 0 5056046..5057053 + 335 29349293 - BT_3885 - Icc family phosphohydrolase 3884 48.46 0 5057028..5057906 - 292 29349294 - BT_3886 - hypothetical protein 3885 33.73 -1 5058397..5058645 + 82 29349295 - BT_3887 - hypothetical protein 3886 51.42 +1 5058844..5059899 + 351 29349296 - BT_3888 - putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase 3887 51.18 +1 5059924..5061279 + 451 29349297 - BT_3889 - subtilisin-like serine protease 3888 52.71 +1 5061369..5062622 + 417 29349298 xseA BT_3890 - exodeoxyribonuclease VII large subunit 3889 41.06 0 5062634..5062840 + 68 29349299 - BT_3891 - hypothetical protein 3890 48.14 0 5062892..5063911 + 339 29349300 - BT_3892 - branched-chain amino acid aminotransferase 3891 42.95 0 5063952..5064575 + 207 29349301 - BT_3893 - hypothetical protein 3892 44.48 0 5064602..5065444 + 280 29349302 trmB BT_3894 - tRNA (guanine-N(7))-methyltransferase 3893 48.54 +1 5065533..5066630 + 365 29349303 - BT_3895 - Mrp/Nbp35 family ATP-binding protein 3894 42.89 0 5066699..5067556 - 285 29349304 - BT_3896 - TonB 3895 42.36 0 5067604..5069508 - 634 29349305 - BT_3897 - putative thiol:disulfide interchange protein DsbE 3896 45.30 0 5069671..5071500 - 609 29349306 - BT_3898 - TonB 3897 38.80 0 5071518..5071883 - 121 29349307 - BT_3899 - transcriptional regulator 3898 33.76 -1 5071882..5072115 + 77 29349308 - BT_3900 - hypothetical protein 3899 41.40 0 5072231..5072887 - 218 29349309 - BT_3901 - hypothetical protein 3900 46.90 0 5073009..5074268 - 419 29349310 - BT_3902 - hypothetical protein 3901 47.04 0 5074268..5075449 - 393 29349311 - BT_3903 - hypothetical protein 3902 47.53 0 5075452..5076444 - 330 29349312 - BT_3904 - hypothetical protein 3903 46.17 0 5076523..5077986 - 487 29349313 - BT_3905 - putative alkaline protease aprF 3904 47.40 0 5078223..5079551 + 442 29349314 - BT_3906 - hypothetical protein 3905 47.29 0 5079538..5081013 + 491 29349315 - BT_3907 - hypothetical protein 3906 48.98 +1 5081032..5082111 + 359 29349316 - BT_3908 - hypothetical protein 3907 50.92 +1 5082126..5084354 + 742 29349317 - BT_3909 - hypothetical protein 3908 50.22 +1 5084365..5085495 + 376 29349318 - BT_3910 - hypothetical protein 3909 45.22 0 5085583..5086524 - 313 29349319 - BT_3911 - malate dehydrogenase 3910 42.84 0 5086708..5087580 + 290 29349320 - BT_3912 - hypothetical protein 3911 41.07 0 5087683..5088264 + 193 29349321 - BT_3913 - hypothetical protein 3912 40.75 0 5088276..5089178 + 300 29349322 - BT_3914 - hypothetical protein 3913 41.98 0 5089576..5089818 + 80 29349323 - BT_3915 - hypothetical protein 3914 43.22 0 5089961..5090911 + 316 29349324 - BT_3916 - site-specific recombinase IntIA 3915 50.72 +1 5091961..5092869 - 302 29349325 ppnK BT_3917 - inorganic polyphosphate/ATP-NAD kinase 3916 48.74 +1 5092982..5093695 + 237 29349326 - BT_3918 - pyridoxal phosphate biosynthetic protein PdxJ 3917 48.61 +1 5093695..5094414 + 239 29349327 - BT_3919 - putative biopolymer transport protein 3918 50.30 +1 5094547..5094876 + 109 29349328 - BT_3920 - hypothetical protein 3919 54.61 +2 5094919..5095797 + 292 29349329 - BT_3921 - hypothetical protein 3920 48.01 0 5095823..5096374 + 183 29349330 - BT_3922 - ThiJ family intracellular protease/amidase 3921 50.61 +1 5096382..5097041 + 219 29349331 ispD BT_3923 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3922 49.79 +1 5097042..5099138 + 698 29349332 - BT_3924 - ATP-dependent DNA helicase recG 3923 44.95 0 5099362..5099826 + 154 29349333 - BT_3925 - nucleoside diphosphate kinase 3924 46.96 0 5099845..5100717 + 290 29349334 - BT_3926 - putative peptidase 3925 44.20 0 5100827..5101369 + 180 29349335 - BT_3927 - hypothetical protein 3926 46.80 0 5101644..5102675 + 343 29349336 - BT_3928 - hypothetical protein 3927 45.85 0 5102705..5103463 + 252 29349337 tpiA BT_3929 - triosephosphate isomerase 3928 47.56 0 5103590..5104039 + 149 29349338 - BT_3930 - hypothetical protein 3929 44.67 0 5104047..5104637 + 196 29349339 folE BT_3931 - GTP cyclohydrolase I 3930 49.11 +1 5104729..5106921 - 730 29349340 - BT_3932 - DNA primase 3931 47.80 0 5107036..5107809 - 257 29349341 - BT_3933 - chorismate mutase/prephenate dehydratase (tyrA) 3932 50.09 +1 5108026..5109087 - 353 29349342 - BT_3934 - putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase 3933 49.24 +1 5109180..5110361 - 393 29349343 - BT_3935 - aminotransferase 3934 45.94 0 5110336..5111184 - 282 29349344 - BT_3936 - prephenate dehydratase 3935 48.39 0 5111535..5112497 - 320 29349345 - BT_3937 - TPR domain-containing protein 3936 49.24 +1 5112537..5114441 - 634 29349346 - BT_3938 - ATP-dependent DNA helicase recQ 3937 48.34 0 5114434..5116152 - 572 29349347 - BT_3939 - single-stranded-DNA-specific exonuclease recJ 3938 32.37 -2 5116702..5116908 + 68 29349348 - BT_3940 - hypothetical protein 3939 43.15 0 5116942..5117868 + 308 29349349 - BT_3941 - hypothetical protein 3940 44.52 0 5118058..5118495 - 145 29349350 - BT_3942 - hypothetical protein 3941 47.34 0 5118574..5119137 + 187 29349351 - BT_3943 - putative translation factor 3942 46.97 0 5119138..5120934 + 598 29349352 - BT_3944 - putative chloride channel protein 3943 48.71 +1 5120937..5121905 + 322 29349353 fmt BT_3945 - methionyl-tRNA formyltransferase 3944 46.24 0 5121958..5122608 + 216 29349354 - BT_3946 - ribulose-phosphate 3-epimerase 3945 44.79 0 5122617..5124719 + 700 29349355 - BT_3947 - competence protein 3946 43.35 0 5124765..5125802 + 345 29349356 - BT_3948 - putative exopolyphosphatase-like protein 3947 41.09 0 5125921..5126565 + 214 29349357 - BT_3949 - hypothetical protein 3948 46.65 0 5126595..5127983 + 462 29349358 - BT_3950 - phosphoglucomutase/phosphomannomutase 3949 42.67 0 5128179..5132153 + 1324 29349359 - BT_3951 - transcriptional regulator 3950 46.95 0 5132450..5135593 + 1047 29349360 - BT_3952 - hypothetical protein 3951 48.52 +1 5135654..5137549 + 631 29349361 - BT_3953 - putative outer membrane protein 3952 48.16 0 5137587..5138942 + 451 29349362 - BT_3954 - hypothetical protein 3953 46.49 0 5138970..5140322 + 450 29349363 - BT_3955 - hypothetical protein 3954 46.91 0 5140401..5141792 + 463 29349364 - BT_3956 - hypothetical protein 3955 40.07 0 5142097..5146044 + 1315 29349365 - BT_3957 - transcriptional regulator 3956 42.34 0 5146676..5149828 + 1050 29349366 - BT_3958 - hypothetical protein 3957 43.16 0 5149853..5151817 + 654 29349367 - BT_3959 - putative outer membrane protein 3958 44.60 0 5151875..5153401 + 508 29349368 - BT_3960 - hypothetical protein 3959 40.37 0 5153427..5154662 + 411 29349369 - BT_3961 - hypothetical protein 3960 46.54 0 5154944..5157229 + 761 29349370 - BT_3962 - putative sugar hydrolase 3961 46.88 0 5157236..5159575 + 779 29349371 - BT_3963 - putative sugar hydrolase 3962 47.04 0 5159605..5160399 + 264 29349372 - BT_3964 - putative secretory protein 3963 47.25 0 5160482..5162752 + 756 29349373 - BT_3965 - hypothetical protein 3964 44.07 0 5162880..5163671 - 263 29349374 - BT_3966 - two-component system response regulator 3965 47.12 0 5163689..5164747 - 352 29349375 - BT_3967 - putative two-component system sensor protein histidine kinase 3966 50.86 +1 5164810..5165739 - 309 29349376 - BT_3968 - cation efflux system protein 3967 51.96 +1 5165823..5170148 - 1441 29349377 - BT_3969 - cation efflux system protein, AcrB/AcrD/AcrF family protein 3968 40.03 0 5171025..5171741 - 238 29349378 - BT_3970 - hypothetical protein 3969 43.46 0 5172133..5172675 + 180 29349379 - BT_3971 - glutathione peroxidase 3970 47.70 0 5172653..5173195 - 180 29349380 - BT_3972 - putative NTP pyrophosphohydrolase 43.33 MEAN 5.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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