version 1.0
Bacteroides thetaiotaomicron VPI-5482, complete genome - 1..6260361 4778 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3813 45.18 0 4966335..4966832 + 165 29349223 - BT_3815 - hypothetical protein 3814 47.61 0 4966835..4968697 + 620 29349224 - BT_3816 - penicillin-binding protein 2 (PBP-2) 3815 46.09 0 4968678..4970135 + 485 29349225 - BT_3817 - rod shape-determining protein rodA 3816 46.46 0 4970137..4970616 - 159 29349226 - BT_3818 - hypothetical protein 3817 48.12 0 4970594..4972189 - 531 29349227 - BT_3819 - hypothetical protein 3818 46.84 0 4972204..4973328 - 374 29349228 - BT_3820 - putative DNA polymerase III, delta subunit 3819 46.23 0 4973330..4974283 - 317 29349229 - BT_3821 - 5,10-methylenetetrahydrofolate reductase 3820 37.66 -1 4974440..4974970 - 176 29349230 - BT_3822 - hypothetical protein 3821 43.08 0 4975223..4975735 - 170 29349231 - BT_3823 - hypothetical protein 3822 37.54 -1 4975761..4976045 - 94 29349232 - BT_3824 - hypothetical protein 3823 44.44 0 4976742..4977461 - 239 29349233 - BT_3825 - transposase 3824 39.32 0 4977635..4978018 - 127 29349234 - BT_3826 - hypothetical protein 3825 32.97 -2 4978395..4980047 + 550 29349235 - BT_3827 - hypothetical protein 3826 34.76 -1 4980336..4980686 + 116 29349236 - BT_3828 - hypothetical protein 3827 32.68 -2 4981152..4981763 + 203 29349237 - BT_3829 - hypothetical protein 3828 30.83 -2 4981879..4982556 + 225 29349238 - BT_3830 - methyltransferase 3829 31.41 -2 4983071..4983382 - 103 29349239 - BT_3831 - hypothetical protein 3830 41.67 0 4988838..4989377 + 179 29349240 - BT_3832 - hypothetical protein 3831 41.94 0 4989390..4989575 + 61 29349241 rpmF BT_3833 - 50S ribosomal protein L32 3832 41.96 0 4989662..4990669 + 335 29349242 - BT_3834 - 3-oxoacyl-(acyl carrier protein) synthase III 3833 42.18 0 4990755..4991636 + 293 29349243 era BT_3835 - GTP-binding protein Era 3834 43.61 0 4991685..4992998 + 437 29349244 engA BT_3836 - GTP-binding protein EngA 3835 46.35 0 4993076..4993843 - 255 29349245 - BT_3837 - ABC transporter ATP-binding protein 3836 43.55 0 4993919..4994662 + 247 29349246 - BT_3838 - hypothetical protein 3837 43.32 0 4994659..4995429 + 256 29349247 - BT_3839 - ABC transporter ATP-binding protein 3838 41.87 0 4995518..4995763 - 81 29349248 - BT_3840 - putative RNA-binding protein rbpA 3839 41.74 0 4996162..4997517 + 451 29349249 - BT_3841 - FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor) 3840 45.70 0 4997661..4998323 + 220 29349250 - BT_3842 - ATP-dependent Clp protease proteolytic subunit 2 3841 44.50 0 4998326..4999570 + 414 29349251 clpX BT_3843 - ATP-dependent protease ATP-binding subunit 3842 43.47 0 4999740..5001920 + 726 29349252 - BT_3844 - ATP-dependent DNA helicase recQ 3843 43.88 0 5002008..5003486 + 492 29349253 - BT_3845 - inosine-5'-monophosphate dehydrogenase 3844 42.27 0 5003581..5005125 + 514 29349254 - BT_3846 - peptidyl-prolyl cis-trans isomerase 3845 40.19 0 5005180..5006025 + 281 29349255 - BT_3847 - hypothetical protein 3846 42.44 0 5006035..5007417 + 460 29349256 - BT_3848 - peptidyl-prolyl cis-trans isomerase 3847 42.46 0 5007440..5009170 + 576 29349257 - BT_3849 - hypothetical protein 3848 41.91 0 5009172..5009474 + 100 29349258 - BT_3850 - hypothetical protein 3849 44.98 0 5009489..5011411 + 640 29349259 - BT_3851 - DNA mismatch repair protein mutL 3850 44.64 0 5011514..5012698 + 394 29349260 - BT_3852 - major outer membrane protein OmpA 3851 40.52 0 5012915..5015488 + 857 29349261 - BT_3853 - hypothetical protein 3852 45.57 0 5016050..5019088 + 1012 29349262 - BT_3854 - hypothetical protein 3853 44.62 0 5019100..5021031 + 643 29349263 - BT_3855 - putative outer membrane protein 3854 42.82 0 5021060..5021755 + 231 29349264 - BT_3856 - hypothetical protein 3855 46.38 0 5021774..5023681 + 635 29349265 - BT_3857 - hypothetical protein 3856 46.69 0 5023713..5025980 + 755 29349266 - BT_3858 - hypothetical protein 3857 45.42 0 5026019..5027995 + 658 29349267 - BT_3859 - hypothetical protein 3858 48.10 0 5028029..5029159 + 376 29349268 - BT_3860 - hypothetical protein 3859 45.76 0 5029186..5030328 + 380 29349269 - BT_3861 - hypothetical protein 3860 43.78 0 5030403..5031551 + 382 29349270 - BT_3862 - endo-alpha-mannosidase 3861 43.81 0 5031632..5034007 + 791 29349271 - BT_3863 - hypothetical protein 3862 48.23 0 5034089..5035189 - 366 29349272 - BT_3864 - tryptophanyl-tRNA synthetase II 3863 34.27 -1 5035239..5035451 + 70 29349273 - BT_3865 - hypothetical protein 3864 48.45 0 5035620..5038841 + 1073 29349274 - BT_3866 - glutamine-dependent carbamyl phosphate synthetase 3865 39.39 0 5038811..5039074 - 87 29349275 - BT_3867 - hypothetical protein 3866 47.89 0 5039698..5041683 - 661 29349276 - BT_3868 - glycosyl hydrolase 3867 47.55 0 5041830..5042603 + 257 29349277 - BT_3869 - hypothetical protein 3868 53.08 +1 5042609..5043160 + 183 29349278 - BT_3870 - putative maltose O-acetyltransferase 3869 43.88 0 5043717..5045063 + 448 29349279 - BT_3871 - adenylosuccinate lyase 3870 49.83 +1 5045139..5046629 + 496 29349280 - BT_3872 - ribosomal large subunit pseudouridine synthase B 3871 44.94 0 5046657..5048060 + 467 29349281 asnC BT_3873 - asparaginyl-tRNA synthetase 3872 40.04 0 5048200..5048691 + 163 29349282 - BT_3874 - hypothetical protein 3873 40.04 0 5048996..5049457 + 153 29349283 rplM BT_3875 - 50S ribosomal protein L13 3874 45.22 0 5049464..5049850 + 128 29349284 rpsI BT_3876 - 30S ribosomal protein S9 3875 42.41 0 5049972..5050808 + 278 29349285 rpsB BT_3877 - 30S ribosomal protein S2 3876 43.40 0 5050934..5051926 + 330 29349286 tsf BT_3878 - elongation factor Ts 3877 42.74 0 5051985..5052335 - 116 29349287 - BT_3879 - putative translation initiation factor SUI1 3878 44.85 0 5052444..5053025 + 193 29349288 - BT_3880 - hypothetical protein 3879 47.06 0 5052952..5054124 + 390 29349289 - BT_3881 - hypothetical protein 3880 47.51 0 5054213..5054875 + 220 29349290 - BT_3882 - redox-sensing transcriptional repressor Rex 3881 46.50 0 5054875..5055489 + 204 29349291 - BT_3883 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 3882 48.54 +1 5055529..5056008 + 159 29349292 - BT_3884 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3883 48.41 0 5056046..5057053 + 335 29349293 - BT_3885 - Icc family phosphohydrolase 3884 48.46 0 5057028..5057906 - 292 29349294 - BT_3886 - hypothetical protein 3885 33.73 -1 5058397..5058645 + 82 29349295 - BT_3887 - hypothetical protein 3886 51.42 +1 5058844..5059899 + 351 29349296 - BT_3888 - putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase 3887 51.18 +1 5059924..5061279 + 451 29349297 - BT_3889 - subtilisin-like serine protease 3888 52.71 +1 5061369..5062622 + 417 29349298 xseA BT_3890 - exodeoxyribonuclease VII large subunit 3889 41.06 0 5062634..5062840 + 68 29349299 - BT_3891 - hypothetical protein 3890 48.14 0 5062892..5063911 + 339 29349300 - BT_3892 - branched-chain amino acid aminotransferase 3891 42.95 0 5063952..5064575 + 207 29349301 - BT_3893 - hypothetical protein 3892 44.48 0 5064602..5065444 + 280 29349302 trmB BT_3894 - tRNA (guanine-N(7))-methyltransferase 3893 48.54 +1 5065533..5066630 + 365 29349303 - BT_3895 - Mrp/Nbp35 family ATP-binding protein 3894 42.89 0 5066699..5067556 - 285 29349304 - BT_3896 - TonB 3895 42.36 0 5067604..5069508 - 634 29349305 - BT_3897 - putative thiol:disulfide interchange protein DsbE 3896 45.30 0 5069671..5071500 - 609 29349306 - BT_3898 - TonB 3897 38.80 0 5071518..5071883 - 121 29349307 - BT_3899 - transcriptional regulator 3898 33.76 -1 5071882..5072115 + 77 29349308 - BT_3900 - hypothetical protein 3899 41.40 0 5072231..5072887 - 218 29349309 - BT_3901 - hypothetical protein 3900 46.90 0 5073009..5074268 - 419 29349310 - BT_3902 - hypothetical protein 3901 47.04 0 5074268..5075449 - 393 29349311 - BT_3903 - hypothetical protein 3902 47.53 0 5075452..5076444 - 330 29349312 - BT_3904 - hypothetical protein 3903 46.17 0 5076523..5077986 - 487 29349313 - BT_3905 - putative alkaline protease aprF 3904 47.40 0 5078223..5079551 + 442 29349314 - BT_3906 - hypothetical protein 3905 47.29 0 5079538..5081013 + 491 29349315 - BT_3907 - hypothetical protein 3906 48.98 +1 5081032..5082111 + 359 29349316 - BT_3908 - hypothetical protein 3907 50.92 +1 5082126..5084354 + 742 29349317 - BT_3909 - hypothetical protein 3908 50.22 +1 5084365..5085495 + 376 29349318 - BT_3910 - hypothetical protein 3909 45.22 0 5085583..5086524 - 313 29349319 - BT_3911 - malate dehydrogenase 3910 42.84 0 5086708..5087580 + 290 29349320 - BT_3912 - hypothetical protein 3911 41.07 0 5087683..5088264 + 193 29349321 - BT_3913 - hypothetical protein 3912 40.75 0 5088276..5089178 + 300 29349322 - BT_3914 - hypothetical protein 43.33 MEAN 5.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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