version 1.0
Bacteroides thetaiotaomicron VPI-5482, complete genome - 1..6260361 4778 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2706 37.65 -1 3368070..3369413 - 447 29348116 secY BT_2707 - preprotein translocase subunit SecY 2707 39.37 0 3369418..3369864 - 148 29348117 rplO BT_2708 - 50S ribosomal protein L15 2708 37.85 -1 3369896..3370072 - 58 29348118 rpmD BT_2709 - 50S ribosomal protein L30 2709 39.50 0 3370082..3370600 - 172 29348119 rpsE BT_2710 - 30S ribosomal protein S5 2710 38.26 0 3370606..3370950 - 114 29348120 rplR BT_2711 - 50S ribosomal protein L18 2711 39.47 0 3370972..3371541 - 189 29348121 rplF BT_2712 - 50S ribosomal protein L6 2712 37.12 -1 3371559..3371954 - 131 29348122 rpsH BT_2713 - 30S ribosomal protein S8 2713 45.00 0 3372007..3372306 - 99 29348123 rpsN BT_2714 - 30S ribosomal protein S14 2714 36.74 -1 3372313..3372870 - 185 29348124 rplE BT_2715 - 50S ribosomal protein L5 2715 39.31 0 3372873..3373190 - 105 29348125 rplX BT_2716 - 50S ribosomal protein L24 2716 40.98 0 3373211..3373576 - 121 29348126 rplN BT_2717 - 50S ribosomal protein L14 2717 35.19 -1 3373579..3373848 - 89 29348127 rpsQ BT_2718 - 30S ribosomal protein S17 2718 32.32 -2 3373845..3374042 - 65 29348128 rpmC BT_2719 - 50S ribosomal protein L29 2719 42.07 0 3374048..3374482 - 144 29348129 rplP BT_2720 - 50S ribosomal protein L16 2720 39.48 0 3374506..3375237 - 243 29348130 rpsC BT_2721 - 30S ribosomal protein S3 2721 40.15 0 3375243..3375653 - 136 29348131 rplV BT_2722 - 50S ribosomal protein L22 2722 37.04 -1 3375689..3375958 - 89 29348132 rpsS BT_2723 - 30S ribosomal protein S19 2723 43.52 0 3375979..3376803 - 274 29348133 rplB BT_2724 - 50S ribosomal protein L2 2724 32.99 -2 3376809..3377099 - 96 29348134 rplW BT_2725 - 50S ribosomal protein L23 2725 39.39 0 3377116..3377742 - 208 29348135 rplD BT_2726 - 50S ribosomal protein L4 2726 42.56 0 3377742..3378359 - 205 29348136 rplC BT_2727 - 50S ribosomal protein L3 2727 39.54 0 3378378..3378683 - 101 29348137 rpsJ BT_2728 - 30S ribosomal protein S10 2728 41.60 0 3378768..3380885 - 705 29348138 - BT_2729 - elongation factor G 2729 38.99 0 3380941..3381417 - 158 29348139 - BT_2730 - 30S ribosomal protein S7 2730 45.77 0 3381561..3381962 - 133 29348140 rpsL BT_2731 - 30S ribosomal protein S12 2731 43.14 0 3382099..3382404 - 101 29348141 - BT_2732 - hypothetical protein 2732 43.51 0 3382547..3386830 - 1427 29348142 - BT_2733 - DNA-directed RNA polymerase subunit beta' 2733 42.85 0 3386937..3390749 - 1270 29348143 rpoB BT_2734 - DNA-directed RNA polymerase subunit beta 2734 41.87 0 3390854..3391228 - 124 29348144 rplL BT_2735 - 50S ribosomal protein L7/L12 2735 41.04 0 3391276..3391794 - 172 29348145 rplJ BT_2736 - 50S ribosomal protein L10 2736 40.06 0 3391810..3392508 - 232 29348146 rplA BT_2737 - 50S ribosomal protein L1 2737 42.79 0 3392524..3392967 - 147 29348147 rplK BT_2738 - 50S ribosomal protein L11 2738 41.80 0 3393029..3393571 - 180 29348148 - BT_2739 - transcription anti-termination protein 2739 44.89 0 3393922..3395106 - 394 29348149 tuf BT_2740 - elongation factor Tu 2740 36.67 -1 3395754..3396053 - 99 29348150 - BT_2741 - sigma-54 modulation protein 2741 40.48 0 3396070..3396951 - 293 29348151 - BT_2742 - integrase, site-specific recombinase 2742 45.62 0 3397408..3399189 + 593 29348152 - BT_2743 - putative aminopeptidase 2743 44.05 0 3399339..3399851 + 170 29348153 - BT_2744 - acetyltransferase 2744 38.85 0 3400447..3401661 + 404 29348154 - BT_2745 - thiol:disulfide interchange protein 2745 41.07 0 3401658..3403286 + 542 29348155 - BT_2746 - thiol:disulfide interchange protein tlpA 2746 43.87 0 3403559..3404782 - 407 29348156 - BT_2747 - 3-deoxy-D-manno-octulosonic-acid transferase 2747 46.60 0 3404799..3406313 - 504 29348157 gltX BT_2748 - glutamyl-tRNA synthetase 2748 43.70 0 3406408..3408480 + 690 29348158 - BT_2749 - membrane-associated HD superfamily hydrolase 2749 48.20 0 3408455..3408925 - 156 29348159 - BT_2750 - putative protein-tyrosine-phosphatase 2750 46.97 0 3408968..3410764 - 598 29348160 - BT_2751 - hypothetical protein 2751 45.50 0 3410820..3413276 - 818 29348161 - BT_2752 - primosomal protein N' (replication factor Y) 2752 39.76 0 3413478..3414068 - 196 29348162 - BT_2753 - hypothetical protein 2753 44.75 0 3414127..3415107 - 326 29348163 - BT_2754 - hypothetical protein 2754 45.45 0 3415335..3416795 - 486 29348164 aspA BT_2755 - aspartate ammonia-lyase 2755 47.22 0 3416948..3418258 + 436 29348165 - BT_2756 - anaerobic C4-dicarboxylate transporter 2756 45.04 0 3418288..3419346 + 352 29348166 ansB BT_2757 - L-asparaginase II 2757 44.19 0 3419362..3420531 + 389 29348167 - BT_2758 - hypothetical protein 2758 41.89 0 3420612..3420833 - 73 29348168 - BT_2759 - hypothetical protein 2759 44.15 0 3420898..3421461 - 187 29348169 - BT_2760 - hypothetical protein 2760 42.72 0 3421513..3422151 - 212 29348170 - BT_2761 - hypothetical protein 2761 42.84 0 3422246..3422929 - 227 29348171 - BT_2762 - TonB 2762 45.24 0 3423675..3424892 - 405 29348172 - BT_2763 - transposase 2763 32.44 -2 3424923..3425258 - 111 29348173 - BT_2764 - hypothetical protein 2764 30.98 -2 3425399..3425950 - 183 29348174 - BT_2765 - hypothetical protein 2765 29.77 -2 3426219..3426527 - 102 29348175 - BT_2766 - hypothetical protein 2766 32.20 -2 3426618..3427235 - 205 29348176 - BT_2767 - hypothetical protein 2767 34.07 -1 3427358..3428308 - 316 29348177 - BT_2768 - hypothetical protein 2768 35.97 -1 3428346..3432137 - 1263 29348178 - BT_2769 - putative serine/threonine-protein kinase pknB 2769 38.07 -1 3432150..3432677 - 175 29348179 - BT_2770 - hypothetical protein 2770 40.59 0 3432674..3434038 - 454 29348180 - BT_2771 - putative serine/threonine-protein kinase pknB 2771 37.76 -1 3434041..3435690 - 549 29348181 - BT_2772 - putative protein phosphatase 2772 39.58 0 3435706..3436281 - 191 29348182 - BT_2773 - hypothetical protein 2773 40.15 0 3436305..3437786 - 493 29348183 - BT_2774 - putative adenylate cyclase 2774 47.46 0 3438939..3441047 + 702 29348184 - BT_2775 - putative helicase 2775 44.10 0 3441171..3442340 - 389 29348185 - BT_2776 - hypothetical protein 2776 41.01 0 3442351..3444303 - 650 29348186 - BT_2777 - hypothetical protein 2777 37.82 -1 3444566..3446215 + 549 29348187 - BT_2778 - RNA polymerase ECF-type sigma factor 2778 35.26 -1 3446294..3447070 + 258 29348188 - BT_2779 - 3-demethylubiquinone-9 3-methyltransferase 2779 39.31 0 3447271..3448458 + 395 29348189 - BT_2780 - putative membrane-associated protein 2780 43.49 0 3448893..3449975 + 360 29348190 - BT_2781 - putative mannose-1-phosphate guanylyltransferase 2781 44.36 0 3450064..3451713 - 549 29348191 - BT_2782 - acyl-CoA synthetase 2782 43.40 0 3451747..3452322 - 191 29348192 - BT_2783 - transcriptional regulator 2783 38.39 0 3452594..3453463 + 289 29348193 - BT_2784 - hypothetical protein 2784 41.68 0 3453478..3456102 + 874 29348194 - BT_2785 - hypothetical protein 2785 39.26 0 3456177..3456446 - 89 29348195 rpsO BT_2786 - 30S ribosomal protein S15 2786 45.11 0 3456602..3458401 + 599 29348196 - BT_2787 - GTP-binding elongation factor family protein TypA/BipA 2787 43.81 0 3458531..3459055 - 174 29348197 - BT_2788 - chromate transport protein 2788 41.22 0 3459052..3459609 - 185 29348198 - BT_2789 - chromate transport protein 2789 42.85 0 3459741..3461348 - 535 29348199 - BT_2790 - phosphoenolpyruvate carboxykinase 2790 45.41 0 3461630..3462283 + 217 29348200 upp BT_2791 - uracil phosphoribosyltransferase 2791 42.90 0 3462290..3463042 - 250 29348201 - BT_2792 - AraC family transcription regulator 2792 44.87 0 3463202..3464839 - 545 29348202 - BT_2793 - putative MFS transporter 2793 45.42 0 3464845..3465936 - 363 29348203 - BT_2794 - putative multidrug resistance protein 2794 42.21 0 3465961..3467346 - 461 29348204 - BT_2795 - outer membrane efflux protein precursor 2795 43.33 0 3467624..3470155 - 843 29348205 - BT_2796 - hypothetical protein 2796 47.38 0 3470274..3471704 - 476 29348206 - BT_2797 - S-adenosyl-L-homocysteine hydrolase 2797 44.23 0 3471884..3473581 - 565 29348207 - BT_2798 - carboxy-terminal processing protease precursor 2798 42.22 0 3473626..3474615 - 329 29348208 - BT_2799 - PfkB family carbohydrate kinase 2799 43.36 0 3475292..3475999 - 235 29348209 - BT_2800 - putative amidophosphoribosyl-transferase 2800 44.03 0 3476031..3476834 - 267 29348210 - BT_2801 - inositol-1-monophosphatase 2801 37.35 -1 3477149..3478690 + 513 29348211 - BT_2802 - hypothetical protein 2802 43.48 0 3478877..3479842 + 321 29348212 - BT_2803 - ribokinase 2803 41.88 0 3479882..3480817 + 311 29348213 - BT_2804 - ribokinase 2804 41.11 0 3480830..3484081 + 1083 29348214 - BT_2805 - hypothetical protein 2805 39.93 0 3484094..3486094 + 666 29348215 - BT_2806 - hypothetical protein 43.33 MEAN 5.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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