IslandPath Analysis: Bacillus subtilis subsp. subtilis str. 168



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 43.31   STD DEV: 4.61
Bacillus subtilis subsp. subtilis str. 168, complete genome - 1..4214630
4105 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
803	 45.50	0	875761..876738	+	325	16077870	yfjN	BSU08030	-	hypothetical protein
804	 50.33	+1	876934..877386	+	150	16077871	yfjM	BSU08040	-	hypothetical protein
805	 40.58	0	877416..878105	+	229	16077872	yfjL	BSU08050	-	hypothetical protein
806	 47.60	0	878337..879338	+	333	16077873	acoA	BSU08060	-	acetoin dehydrogenase E1 component (TPP-dependent alpha subunit)
807	 50.44	+1	879342..880370	+	342	16077874	acoB	BSU08070	-	acetoin dehydrogenase E1 component (TPP-dependent beta subunit)
808	 49.46	+1	880384..881580	+	398	16077875	acoC	BSU08080	-	branched-chain alpha-keto acid dehydrogenase subunit E2
809	 51.42	+1	881601..882977	+	458	16077876	acoL	BSU08090	-	dihydrolipoamide dehydrogenase
810	 49.78	+1	883093..884910	+	605	16077877	acoR	BSU08100	-	transcriptional regulator
811	 39.44	0	884964..885143	+	59	16077878	sspH	BSU08110	-	acid-soluble spore protein H
812	 51.82	+1	885179..885508	-	109	16077879	yfjF	BSU08120	-	hypothetical protein
813	 43.57	0	885558..886016	-	152	16077880	yfjE	BSU08130	-	hypothetical protein
814	 39.61	0	886110..886667	-	185	16077881	yfjD	BSU08140	-	hypothetical protein
815	 42.06	0	886699..887466	-	255	16077882	yfjC	BSU08150	-	hypothetical protein
816	 45.26	0	887478..888701	-	407	16077883	yfjB	BSU08160	-	hypothetical protein
817	 47.30	0	888707..889021	-	104	16077884	yfjA	BSU08170	-	hypothetical protein
818	 48.00	+1	889357..890706	+	449	16077885	malA	BSU08180	-	6-phospho-alpha-glucosidase
819	 41.70	0	890771..891535	+	254	16077886	yfiA	BSU08190	-	hypothetical protein
820	 47.79	0	891550..893133	+	527	16077887	malP	BSU08200	-	phosphotransferase system (PTS) maltose-specific enzyme IICB component
821	 46.98	0	893239..894960	+	573	16077888	yfiB	BSU08210	-	hypothetical protein
822	 46.72	0	894954..896768	+	604	16077889	yfiC	BSU08220	-	hypothetical protein
823	 42.96	0	896923..897327	+	134	16077890	yfiD	BSU08230	-	hypothetical protein
824	 50.12	+1	897345..898202	+	285	16077891	yfiE	BSU08240	-	hypothetical protein
825	 43.28	0	898296..899240	+	314	16077892	yfiF	BSU08250	-	hypothetical protein
826	 48.31	+1	899415..900863	+	482	16077893	yfiG	BSU08260	-	hypothetical protein
827	 47.03	0	900890..901831	+	313	16077894	yfiH	BSU08270	-	hypothetical protein
828	 48.90	+1	901841..903022	+	393	16077895	yfiI	BSU08280	-	hypothetical protein
829	 47.38	0	903146..904348	+	400	16077896	yfiJ	BSU08290	-	hypothetical protein
830	 48.11	+1	904345..905007	+	220	16077897	yfiK	BSU08300	-	hypothetical protein
831	 48.08	+1	905151..906086	+	311	16077898	yfiL	BSU08310	-	hypothetical protein
832	 45.09	0	906099..907289	+	396	16077899	yfiM	BSU08320	-	hypothetical protein
833	 48.01	+1	907303..908460	+	385	16077900	yfiN	BSU08330	-	hypothetical protein
834	 46.08	0	908533..909081	-	182	16077901	padR	BSU08340	-	transcriptional regulator
835	 41.07	0	909354..909986	+	210	16077902	lipB	BSU08350	-	esterase
836	 44.54	0	910175..911263	+	362	16077903	yfiQ	BSU08360	-	hypothetical protein
837	 44.17	0	911299..911916	-	205	16077904	yfiR	BSU08370	-	hypothetical protein
838	 47.21	0	911882..913135	-	417	16077905	yfiS	BSU08380	-	hypothetical protein
839	 49.16	+1	913259..913795	+	178	16077906	yfiT	BSU08390	-	metal-dependent hydrolase
840	 49.07	+1	913792..915348	-	518	16077907	yfiU	BSU08400	-	hypothetical protein
841	 44.10	0	915459..915941	-	160	16077908	yfiV	BSU08410	-	hypothetical protein
842	 44.79	0	916113..916889	+	258	16077909	yfiW	BSU08420	-	hypothetical protein
843	 47.01	0	916864..918684	+	606	16077910	yfiX	BSU08430	-	hypothetical protein
844	 42.02	0	918702..919679	-	325	16077911	yfiY	BSU08440	-	hypothetical protein
845	 51.30	+1	919810..920811	+	333	16077912	yfiZ	BSU08450	-	hypothetical protein
846	 48.64	+1	920808..921839	+	343	16077913	yfhA	BSU08460	-	hypothetical protein
847	 47.17	0	921954..922835	+	293	16077914	yfhB	BSU08470	-	hypothetical protein
848	 44.79	0	922923..923507	+	194	16077915	yfhC	BSU08480	-	hypothetical protein
849	 44.79	0	923546..923737	-	63	16077916	yfhD	BSU08490	-	hypothetical protein
850	 42.34	0	923804..923914	-	36	16077917	yfhE	BSU08500	-	hypothetical protein
851	 49.45	+1	923969..924880	-	303	16077918	yfhF	BSU08510	-	hypothetical protein
852	 43.27	0	924969..925763	+	264	16077919	recX	BSU08520	-	recombination regulator RecX
853	 43.17	0	925765..926079	+	104	16077920	yfhH	BSU08530	-	hypothetical protein
854	 47.99	+1	926222..927415	+	397	16077921	yfhI	BSU08540	-	hypothetical protein
855	 42.48	0	927448..927600	-	50	50812199	sspK	BSU08550	-	acid-soluble spore protein K
856	 41.11	0	927725..927994	+	89	16077922	yfhJ	BSU08560	-	hypothetical protein
857	 44.12	0	928139..928657	+	172	16077923	yfhK	BSU08570	-	hypothetical protein
858	 45.35	0	928742..929074	+	110	16077924	yfhL	BSU08580	-	hypothetical protein
859	 47.97	+1	929061..929921	+	286	16077925	yfhM	BSU08590	-	hypothetical protein
860	 40.61	0	930154..931143	+	329	16077926	csbB	BSU08600	-	stress response protein
861	 43.01	0	931340..933799	+	819	16077927	yfhO	BSU08610	-	hypothetical protein
862	 45.33	0	933792..934775	-	327	16077928	yfhP	BSU08620	-	hypothetical protein
863	 45.77	0	934991..936100	+	369	16077929	yfhQ	BSU08630	-	hypothetical protein
864	 44.00	0	936108..936332	-	74	16077930	yfhS	BSU08640	-	hypothetical protein
865	 46.35	0	936414..937166	+	250	16077931	fabL	BSU08650	-	enoyl-(acyl carrier protein) reductase
866	 41.18	0	937235..937489	+	84	16077932	sspE	BSU08660	-	small acid-soluble spore protein (gamma-type SASP)
867	 44.64	0	937578..937922	+	114	16077933	ygaB	BSU08670	-	hypothetical protein
868	 41.43	0	938066..938596	+	176	50812200	ygaC	BSU08680	-	hypothetical protein
869	 43.62	0	938657..940426	+	589	16077935	ygaD	BSU08690	-	hypothetical protein
870	 40.87	0	940503..941564	-	353	16077936	ygaE	BSU08700	-	hypothetical protein
871	 47.44	0	941784..943073	-	429	50812201	gsaB	BSU08710	-	glutamate-1-semialdehyde aminotransferase
872	 41.56	0	943226..943699	+	157	50812202	ygaF	BSU08720	-	hypothetical protein
873	 45.66	0	943822..944259	+	145	16077938	perR	BSU08730	-	FUR family transcriptional regulator
874	 37.29	-1	944294..944647	-	117	50812203	ygzB	BSU08740	-	hypothetical protein
875	 39.55	0	944855..945739	+	294	16077940	ygxA	BSU08750	-	hypothetical protein
876	 45.17	0	952707..953483	-	258	16077941	spo0M	BSU08760	-	sporulation-control gene
877	 37.75	-1	953625..953828	+	67	16077942	ygzA	BSU08770	-	hypothetical protein
878	 44.05	0	954225..954980	+	251	16077943	ygaJ	BSU08780	-	hypothetical protein
879	 46.19	0	955231..957003	+	590	16077944	thiC	BSU08790	-	thiamine biosynthesis protein ThiC
880	 46.83	0	957041..958144	-	367	16077945	ygaK	BSU08800	-	hypothetical protein
881	 37.90	-1	958626..958844	+	72	16077946	senS	BSU08810	-	transcriptional regulator
882	 45.66	0	958871..960322	-	483	16077947	katA	BSU08820	-	vegetative catalase 1
883	 46.62	0	960686..961498	+	270	50812204	ssuB	BSU08830	-	aliphatic sulfonate ABC transporter (binding protein)
884	 42.64	0	961516..962514	+	332	16077949	ssuA	BSU08840	-	aliphatic sulfonate ABC transporter (binding lipoprotein)
885	 50.42	+1	962511..963341	+	276	16077950	ssuC	BSU08850	-	aliphatic sulfonate ABC transporter (permease)
886	 50.75	+1	963364..964494	+	376	50812205	ssuD	BSU08860	-	alkanesulfonate monooxygenase
887	 42.09	0	964598..965134	+	178	16077952	ygaN	BSU08870	-	hypothetical protein
888	 47.78	0	965246..965515	+	89	16077953	rpsN	BSU08880	-	30S ribosomal protein S14
889	 44.30	0	965533..966006	-	157	16077954	ygaO	BSU08890	-	hypothetical protein
890	 42.79	0	966566..967189	-	207	16077955	yhzB	BSU08900	-	hypothetical protein
891	 46.94	0	967125..968432	+	435	16077956	yhbA	BSU08910	-	hypothetical protein
892	 46.15	0	968499..969434	+	311	16077957	yhbB	BSU08920	-	hypothetical protein
893	 40.99	0	969472..969954	+	160	16077958	cspR	BSU08930	-	rRNA methylase-like protein
894	 40.86	0	970004..970720	+	238	16077959	yhbD	BSU08940	-	hypothetical protein
895	 46.64	0	970711..971424	+	237	16077960	yhbE	BSU08950	-	hypothetical protein
896	 45.90	0	971436..972143	+	235	16077961	yhbF	BSU08960	-	hypothetical protein
897	 43.99	0	972493..974388	+	631	16077962	prkA	BSU08970	-	serine protein kinase
898	 41.65	0	974568..975746	+	392	16077963	yhbH	BSU08980	-	hypothetical protein
899	 43.44	0	975906..976370	+	154	16077964	yhbI	BSU08990	-	hypothetical protein
900	 37.69	-1	976406..977071	+	221	16077965	yhbJ	BSU09000	-	hypothetical protein
901	 43.84	0	977112..978710	+	532	16077966	yhcA	BSU09010	-	hypothetical protein
902	 48.40	+1	978733..979263	+	176	16077967	yhcB	BSU09020	-	hypothetical protein
43.31	MEAN

4.61	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.