IslandPathversion 1.0

IslandPath Analysis: Bacillus subtilis subsp. subtilis str. 168



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.31 STD DEV: 4.61
Bacillus subtilis subsp. subtilis str. 168, complete genome - 1..4214630
4105 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2562	 45.63	0	2642438..2642998	-	186	16079617	yqeK	BSU25630	-	hypothetical protein
2563	 42.28	0	2642988..2643557	-	189	16079618	nadD	BSU25640	-	nicotinic acid mononucleotide adenylyltransferase
2564	 39.52	0	2643569..2643859	-	96	16079619	yqeI	BSU25650	-	hypothetical protein
2565	 43.06	0	2643853..2644695	-	280	16079620	aroE	BSU25660	-	shikimate 5-dehydrogenase
2566	 42.23	0	2644713..2645813	-	366	16079621	yqeH	BSU25670	-	GTP-binding protein YqeH
2567	 42.97	0	2645817..2646335	-	172	16079622	yqeG	BSU25680	-	hypothetical protein
2568	 30.82	-2	2646679..2646837	+	52	50812270	sda	BSU25690	-	mediates a developmental checkpoint coupling initiation of sporulation (phosphorylation of Spo0A) to the function of replication initiation proteins
2569	 43.31	0	2647143..2647874	-	243	16079623	yqeF	BSU25700	-	hypothetical protein
2570	 44.22	0	2648126..2648878	-	250	16079624	cwlH	BSU25710	-	N-acetylmuramoyl-L-alanine amidase
2571	 39.55	0	2649065..2649691	+	208	16079625	yqeD	BSU25720	-	hypothetical protein
2572	 45.19	0	2649710..2650603	-	297	16079626	yqeC	BSU25730	-	6-phosphogluconate dehydrogenase-like protein
2573	 44.49	0	2650855..2651580	+	241	16079627	yqeB	BSU25740	-	hypothetical protein
2574	 51.09	+1	2651613..2652023	-	136	16079628	nucB	BSU25750	-	nuclease
2575	 40.34	0	2652219..2652689	+	156	16079629	spoIVCB	BSU25760	-	RNA polymerase sporulation-specific sigma factor (sigma-K) (N-terminal half)
2576	 37.19	-1	2652597..2654099	-	500	16079630	spoIVCA	BSU25770	-	site-specific DNA recombinase
2577	 40.48	0	2654548..2654967	-	139	16079631	arsC	BSU25780	-	arsenate reductase
2578	 36.41	-1	2654979..2656019	-	346	16079632	arsB	BSU25790	-	membrane-associated protein
2579	 36.28	-1	2656042..2656482	-	146	16079633	yqcK	BSU25800	-	hypothetical protein
2580	 33.65	-2	2656543..2656860	-	105	16079634	arsR	BSU25810	-	ArsR family transcriptional regulator
2581	 36.86	-1	2657232..2657996	-	254	16079635	yqcI	BSU25820	-	hypothetical protein
2582	 35.73	-1	2658440..2659567	+	375	16079636	rapE	BSU25830	-	response regulator aspartate phosphatase
2583	 37.04	-1	2659557..2659691	+	44	16079637	phrE	BSU25840	-	regulator of the activity of phosphatase RapE
2584	 34.59	-1	2659801..2659959	+	52	16079638	yqzI	BSU25850	-	hypothetical protein
2585	 38.60	-1	2660329..2661924	+	531	16079639	yqcG	BSU25860	-	hypothetical protein
2586	 35.41	-1	2661939..2662517	+	192	16079640	yqcF	BSU25870	-	hypothetical protein
2587	 32.78	-2	2662778..2663140	-	120	16079641	yqxJ	BSU25880	-	hypothetical protein
2588	 38.54	-1	2663156..2663635	-	159	16079642	yqxI	BSU25890	-	hypothetical protein
2589	 40.66	0	2663800..2664618	-	272	16079643	cwlA	BSU25900	-	N-acetylmuramoyl-L-alanine amidase
2590	 35.70	-1	2664663..2665085	-	140	16079644	yqxH	BSU25910	-	hypothetical protein
2591	 40.38	0	2665130..2666023	-	297	16079645	yqxG	BSU25920	-	hypothetical protein
2592	 38.79	0	2666111..2666275	-	54	16079646	yqcE	BSU25930	-	hypothetical protein
2593	 40.48	0	2666272..2666607	-	111	16079647	yqcD	BSU25940	-	hypothetical protein
2594	 38.42	-1	2666617..2667717	-	366	16079648	yqcC	BSU25950	-	hypothetical protein
2595	 37.00	-1	2667720..2667992	-	90	16079649	yqcB	BSU25960	-	hypothetical protein
2596	 44.56	0	2667989..2668567	-	192	16079650	yqcA	BSU25970	-	hypothetical protein
2597	 44.13	0	2668551..2669597	-	348	16079651	yqbT	BSU25980	-	hypothetical protein
2598	 42.49	0	2669590..2670015	-	141	16079652	yqbS	BSU25990	-	hypothetical protein
2599	 40.91	0	2670028..2670291	-	87	16079653	yqbR	BSU26000	-	hypothetical protein
2600	 42.92	0	2670288..2671268	-	326	16079654	yqbQ	BSU26010	-	hypothetical protein
2601	 38.79	0	2671281..2671940	-	219	16079655	yqbP	BSU26020	-	hypothetical protein
2602	 43.25	0	2671933..2676690	-	1585	16079656	yqbO	BSU26030	-	hypothetical protein
2603	 41.56	0	2676872..2677321	-	149	16079657	yqbN	BSU26040	-	hypothetical protein
2604	 36.11	-1	2677467..2677646	+	59	16079658	yqdB	BSU26050	-	hypothetical protein
2605	 42.12	0	2678369..2678812	-	147	16079659	yqbM	BSU26060	-	hypothetical protein
2606	 37.78	-1	2678815..2679219	-	134	16079660	yqbL	BSU26070	-	hypothetical protein
2607	 44.77	0	2679297..2680214	-	305	16079661	yqbK	BSU26080	-	hypothetical protein
2608	 42.24	0	2680403..2680840	-	145	16079662	yqbJ	BSU26090	-	hypothetical protein
2609	 45.04	0	2680853..2681356	-	167	16079663	yqbI	BSU26100	-	hypothetical protein
2610	 41.05	0	2681353..2681715	-	120	16079664	yqbH	BSU26110	-	hypothetical protein
2611	 37.88	-1	2681712..2682107	-	131	16079665	yqbG	BSU26120	-	hypothetical protein
2612	 34.94	-1	2682111..2682422	-	103	16079666	yqbF	BSU26130	-	hypothetical protein
2613	 41.03	0	2682433..2683368	-	311	16079667	yqbE	BSU26140	-	hypothetical protein
2614	 41.18	0	2683387..2684355	-	322	16079668	yqbD	BSU26150	-	hypothetical protein
2615	 29.66	-2	2684388..2685041	-	217	16079669	yqbC	BSU26160	-	hypothetical protein
2616	 42.70	0	2685082..2685999	-	305	16079670	yqbB	BSU26170	-	hypothetical protein
2617	 39.01	0	2685996..2687528	-	510	16079671	yqbA	BSU26180	-	hypothetical protein
2618	 41.36	0	2687532..2688827	-	431	16079672	yqaT	BSU26190	-	hypothetical protein
2619	 40.28	0	2688820..2689539	-	239	16079673	yqaS	BSU26200	-	hypothetical protein
2620	 27.31	-2	2689607..2690071	-	154	16079674	yqaR	BSU26210	-	hypothetical protein
2621	 40.13	0	2690215..2690670	-	151	16079675	yqaQ	BSU26220	-	hypothetical protein
2622	 32.04	-2	2690868..2691797	+	309	16079676	yqaP	BSU26230	-	hypothetical protein
2623	 39.61	0	2691871..2692077	-	68	16079677	yqaO	BSU26240	-	hypothetical protein
2624	 42.42	0	2692159..2692587	-	142	16079678	yqaN	BSU26250	-	hypothetical protein
2625	 40.13	0	2692823..2693764	-	313	16079679	yqaM	BSU26260	-	hypothetical protein
2626	 41.74	0	2693646..2694347	-	233	16079680	yqaL	BSU26270	-	hypothetical protein
2627	 40.23	0	2694399..2695253	-	284	16079681	yqaK	BSU26280	-	hypothetical protein
2628	 40.31	0	2695256..2696215	-	319	16079682	yqaJ	BSU26290	-	hypothetical protein
2629	 37.95	-1	2696321..2696515	-	64	16079683	yqaI	BSU26300	-	hypothetical protein
2630	 40.31	0	2696645..2696902	-	85	16079684	yqaH	BSU26310	-	hypothetical protein
2631	 42.81	0	2696899..2697468	-	189	16079685	yqaG	BSU26320	-	hypothetical protein
2632	 40.43	0	2697542..2697682	-	46	16079686	yqdA	BSU26330	-	hypothetical protein
2633	 35.50	-1	2697712..2697942	-	76	16079687	yqaF	BSU26340	-	hypothetical protein
2634	 35.90	-1	2698119..2698469	+	116	16079688	yqaE	BSU26350	-	hypothetical protein
2635	 21.43	-2	2698736..2698903	-	55	16079689	yqaD	BSU26360	-	hypothetical protein
2636	 37.24	-1	2699259..2699795	-	178	16079690	yqaC	BSU26370	-	hypothetical protein
2637	 35.07	-1	2700064..2700582	+	172	16079691	yqaB	BSU26380	-	hypothetical protein
2638	 42.93	0	2700564..2700980	+	138	16079692	spoIIIC	BSU26390	-	RNA polymerase sporulation-specific sigma factor (sigma-K) (C-terminal half)
2639	 41.21	0	2701205..2701369	-	54	16079693	yrkS	BSU26400	-	hypothetical protein
2640	 39.05	0	2701914..2702333	-	139	16079694	yrkR	BSU26410	-	phosphate-starvation-inducible protein PsiE
2641	 42.26	0	2702376..2703674	-	432	16079695	yrkQ	BSU26420	-	hypothetical protein
2642	 42.82	0	2703661..2704356	-	231	16079696	yrkP	BSU26430	-	hypothetical protein
2643	 44.25	0	2704624..2705841	+	405	16079697	yrkO	BSU26440	-	hypothetical protein
2644	 39.61	0	2706353..2706910	+	185	16079698	yrkN	BSU26450	-	hypothetical protein
2645	 40.74	0	2706989..2707096	+	35	16079699	yrkM	BSU26460	-	hypothetical protein
2646	 40.00	0	2707401..2707925	-	174	16079700	yrkL	BSU26470	-	hypothetical protein
2647	 30.82	-2	2708169..2708645	-	158	16079701	yrkK	BSU26480	-	hypothetical protein
2648	 37.28	-1	2709228..2710013	-	261	16079702	yrkJ	BSU26490	-	hypothetical protein
2649	 39.47	0	2710074..2710301	-	75	16079703	yrkI	BSU26500	-	hypothetical protein
2650	 41.10	0	2710335..2711222	-	295	16079704	yrkH	BSU26510	-	hypothetical protein
2651	 31.53	-2	2711351..2711461	-	36	16079705	yrkG	BSU26520	-	hypothetical protein
2652	 39.61	0	2711803..2712360	-	185	16079706	yrkF	BSU26530	-	hypothetical protein
2653	 37.68	-1	2712546..2713028	-	160	16079707	yrkE	BSU26540	-	hypothetical protein
2654	 40.10	0	2713175..2713366	-	63	16079708	yrkD	BSU26550	-	hypothetical protein
2655	 39.39	0	2714159..2714719	-	186	16079709	yrkC	BSU26560	-	hypothetical protein
2656	 42.18	0	2714945..2715091	-	48	16079710	yrkB	BSU26570	-	hypothetical protein
2657	 34.18	-1	2715261..2716082	-	273	16079711	bltR	BSU26580	-	transcriptional regulator
2658	 38.99	0	2716199..2717401	+	400	16079712	blt	BSU26590	-	multidrug-efflux transporter
2659	 33.99	-2	2717570..2718028	+	152	16079713	bltD	BSU26600	-	spermine/spermidine acetyltransferase
2660	 36.32	-1	2718185..2719489	-	434	16079714	yrkA	BSU26610	-	hypothetical protein
2661	 35.09	-1	2719913..2720878	-	321	16079715	yrdR	BSU26620	-	hypothetical protein
43.31	MEAN

4.61	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.