IslandPathversion 1.0

IslandPath Analysis: Bacillus subtilis subsp. subtilis str. 168



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 43.31 STD DEV: 4.61
Bacillus subtilis subsp. subtilis str. 168, complete genome - 1..4214630
4105 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1153	 44.92	0	1229228..1230349	+	373	16078218	yjbF	BSU11530	-	hypothetical protein
1154	 43.93	0	1230579..1232408	+	609	16078219	yjbG	BSU11540	-	hypothetical protein
1155	 42.27	0	1232926..1233753	-	275	16078220	yjbH	BSU11550	-	hypothetical protein
1156	 47.62	0	1233822..1234220	-	132	16078221	yjbI	BSU11560	-	hypothetical protein
1157	 46.52	0	1234475..1235020	-	181	16078222	yjbJ	BSU11570	-	hypothetical protein
1158	 41.54	0	1235224..1235796	-	190	16078223	yjbK	BSU11580	-	hypothetical protein
1159	 39.57	0	1235921..1236289	+	122	16078224	yjbL	BSU11590	-	hypothetical protein
1160	 45.44	0	1236318..1236953	+	211	16078225	yjbM	BSU11600	-	hypothetical protein
1161	 45.57	0	1236972..1237772	+	266	16078226	ppnK	BSU11610	-	inorganic polyphosphate/ATP-NAD kinase
1162	 49.77	+1	1237835..1238686	+	283	16078227	yjbO	BSU11620	-	hypothetical protein
1163	 46.53	0	1238699..1239433	-	244	16078228	yjbP	BSU11630	-	bis(5'-nucleosyl)-tetraphosphatase PrpE
1164	 43.85	0	1239668..1241512	+	614	16078229	yjbQ	BSU11640	-	hypothetical protein
1165	 48.80	+1	1241761..1242471	+	236	16078230	tenA	BSU11650	-	transcriptional regulator
1166	 48.22	+1	1242446..1243063	+	205	16078231	tenI	BSU11660	-	transcriptional regulator TenI
1167	 48.47	+1	1243047..1244156	+	369	16078232	goxB	BSU11670	-	glycine oxidase
1168	 40.80	0	1244156..1244356	+	66	16078233	thiS	BSU11680	-	hydroxyethylthiazole phosphate biosynthesis (thiamine biosynthesis)
1169	 49.03	+1	1244353..1245123	+	256	16078234	thiG	BSU11690	-	thiazole synthase
1170	 51.04	+1	1245120..1246130	+	336	16078235	thiF	BSU11700	-	thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein
1171	 49.51	+1	1246149..1246964	+	271	16078236	yjbV	BSU11710	-	phosphomethylpyrimidine kinase
1172	 48.13	+1	1247100..1247876	+	258	50812220	fabI	BSU11720	-	enoyl-(acyl carrier protein) reductase
1173	 48.68	+1	1247977..1248660	+	227	16078238	yjbX	BSU11730	-	hypothetical protein
1174	 42.28	0	1248754..1249200	-	148	16078239	cotZ	BSU11740	-	spore coat protein (insoluble fraction)
1175	 45.40	0	1249328..1249816	-	162	16078240	cotY	BSU11750	-	spore coat protein (insoluble fraction)
1176	 41.62	0	1249968..1250486	-	172	16078241	cotX	BSU11760	-	spore coat protein (insoluble fraction)
1177	 35.85	-1	1250585..1250902	-	105	16078242	cotW	BSU11770	-	spore coat protein (insoluble fraction)
1178	 40.05	0	1250943..1251329	-	128	16078243	cotV	BSU11780	-	spore coat protein (insoluble fraction)
1179	 50.70	+1	1251489..1251845	+	118	16078244	yjcA	BSU11790	-	hypothetical protein
1180	 42.13	0	1252170..1252385	+	71	16078245	yjcB	BSU11800	-	hypothetical protein
1181	 36.96	-1	1252649..1252951	+	100	16078246	yjcC	BSU11810	-	hypothetical protein
1182	 46.40	0	1253025..1255304	-	759	16078247	yjcD	BSU11820	-	hypothetical protein
1183	 39.93	0	1255385..1255687	-	100	16078248	yjcE	BSU11830	-	hypothetical protein
1184	 47.52	0	1255748..1256170	-	140	16078249	yjcF	BSU11840	-	hypothetical protein
1185	 43.60	0	1256174..1256689	-	171	16078250	yjcG	BSU11850	-	hypothetical protein
1186	 45.92	0	1256726..1257448	-	240	16078251	yjcH	BSU11860	-	hypothetical protein
1187	 47.95	+1	1257804..1258925	+	373	16078252	yjcI	BSU11870	-	cystathionine gamma-synthase
1188	 50.90	+1	1258918..1260090	+	390	16078253	yjcJ	BSU11880	-	cystathionine beta-lyase
1189	 42.31	0	1260123..1260668	-	181	16078254	yjcK	BSU11890	-	hypothetical protein
1190	 45.93	0	1260738..1261928	-	396	16078255	yjcL	BSU11900	-	hypothetical protein
1191	 31.30	-2	1263014..1264243	-	409	16078256	yjcM	BSU11910	-	hypothetical protein
1192	 36.45	-1	1264369..1264689	+	106	16078257	yjcN	BSU11920	-	hypothetical protein
1193	 43.72	0	1265199..1265660	+	153	16078258	yjcO	BSU11930	-	hypothetical protein
1194	 29.56	-2	1265926..1266429	+	167	16078259	yjcP	BSU11940	-	hypothetical protein
1195	 32.63	-2	1266441..1266725	+	94	16078260	yjcQ	BSU11950	-	hypothetical protein
1196	 44.13	0	1266886..1267413	+	175	16078261	yjcR	BSU11960	-	hypothetical protein
1197	 34.59	-1	1267587..1267904	+	105	16078262	yjcS	BSU11970	-	hypothetical protein
1198	 38.62	-1	1268141..1268896	+	251	16078263	fabG	BSU11980	-	3-ketoacyl-(acyl-carrier-protein) reductase
1199	 35.34	-1	1269045..1269392	-	115	16078264	yjdB	BSU11990	-	hypothetical protein
1200	 40.47	0	1269943..1271889	+	648	16078265	manR	BSU12000	-	transcriptional regulator
1201	 46.50	0	1272037..1273806	+	589	16078266	manP	BSU12010	-	phosphotransferase system (PTS) mannose-specific enzyme IIBCA component
1202	 43.46	0	1274005..1274952	+	315	16078267	manA	BSU12020	-	mannose-6-phosphate isomerase
1203	 39.54	0	1275122..1275604	+	160	16078268	yjdF	BSU12030	-	hypothetical protein
1204	 37.87	-1	1275650..1276156	-	168	16078269	yjdG	BSU12040	-	hypothetical protein
1205	 41.73	0	1276388..1276792	-	134	16078270	yjdH	BSU12050	-	hypothetical protein
1206	 41.46	0	1276997..1277476	+	159	16078271	yjdI	BSU12060	-	hypothetical protein
1207	 36.97	-1	1277876..1278205	-	109	16078272	yjdJ	BSU12070	-	hypothetical protein
1208	 45.56	0	1278825..1279814	-	329	16078273	ctaO	BSU12080	-	heme O synthase activity
1209	 45.68	0	1279937..1280260	-	107	16078274	cotT	BSU12090	-	spore coat protein (inner)
1210	 38.75	0	1280439..1281842	+	467	16078275	yjeA	BSU12100	-	hypothetical protein
1211	 43.46	0	1281882..1282355	-	157	16078276	yjfA	BSU12110	-	hypothetical protein
1212	 41.07	0	1282480..1282647	-	55	16078277	yjfB	BSU12120	-	hypothetical protein
1213	 43.66	0	1282774..1283703	+	309	16078278	yjfC	BSU12130	-	hypothetical protein
1214	 46.12	0	1283681..1284079	-	132	16078279	yjgA	BSU12140	-	hypothetical protein
1215	 47.22	0	1284180..1284755	-	191	16078280	yjgB	BSU12150	-	hypothetical protein
1216	 48.99	+1	1284901..1287858	+	985	16078281	yjgC	BSU12160	-	hypothetical protein
1217	 45.28	0	1287851..1288411	+	186	16078282	yjgD	BSU12170	-	hypothetical protein
1218	 36.60	-1	1288608..1289249	+	213	16078283	yjhA	BSU12180	-	hypothetical protein
1219	 49.71	+1	1289442..1289954	+	170	16078284	yjhB	BSU12190	-	hypothetical protein
1220	 39.07	0	1289985..1290263	-	92	16078285	yjiA	BSU12200	-	hypothetical protein
1221	 46.94	0	1290654..1291844	+	396	16078286	yjiB	BSU12210	-	hypothetical protein
1222	 46.31	0	1291867..1293045	+	392	16078287	yjiC	BSU12220	-	hypothetical protein
1223	 50.31	+1	1293448..1294260	+	270	16078288	hemD	BSU12230	-	uroporphyrinogen-III synthase
1224	 46.88	0	1294306..1295058	-	250	16078289	yjkA	BSU12240	-	hypothetical protein
1225	 49.27	+1	1295058..1295810	-	250	16078290	yjkB	BSU12250	-	hypothetical protein
1226	 46.67	0	1295930..1296904	-	324	16078291	yjlA	BSU12260	-	hypothetical protein
1227	 52.01	+1	1297036..1297533	+	165	16078292	yjlB	BSU12270	-	hypothetical protein
1228	 43.50	0	1297922..1298344	+	140	16078293	yjlC	BSU12280	-	hypothetical protein
1229	 44.95	0	1298384..1299562	+	392	16078294	yjlD	BSU12290	-	hypothetical protein
1230	 43.25	0	1299760..1301181	+	473	16078295	uxaC	BSU12300	-	glucuronate isomerase
1231	 44.64	0	1301249..1302628	+	459	16078296	yjmB	BSU12310	-	hypothetical protein
1232	 48.72	+1	1302733..1303746	+	337	16078297	yjmC	BSU12320	-	hypothetical protein
1233	 50.69	+1	1303752..1304771	+	339	16078298	yjmD	BSU12330	-	hypothetical protein
1234	 47.22	0	1304796..1305875	+	359	16078299	uxuA	BSU12340	-	mannonate dehydratase
1235	 52.09	+1	1305872..1306708	+	278	16078300	yjmF	BSU12350	-	D-mannonate oxidoreductase
1236	 49.01	+1	1306756..1308024	+	422	16078301	exuT	BSU12360	-	hexuronate transporter
1237	 43.81	0	1308112..1309113	+	333	16078302	exuR	BSU12370	-	LacI family transcription regulator
1238	 42.90	0	1309190..1310632	+	480	16078303	uxaB	BSU12380	-	altronate oxidoreductase
1239	 46.12	0	1310629..1312122	+	497	16078304	uxaA	BSU12390	-	altronate hydrolase
1240	 45.23	0	1312161..1312925	-	254	16078305	yjnA	BSU12400	-	hypothetical protein
1241	 44.73	0	1313150..1313614	-	154	16078306	yjoA	BSU12410	-	hypothetical protein
1242	 43.87	0	1313763..1315034	+	423	16078307	yjoB	BSU12420	-	hypothetical protein
1243	 39.40	0	1315179..1316315	+	378	16078308	rapA	BSU12430	-	response regulator aspartate phosphatase
1244	 43.70	0	1316305..1316439	+	44	16078309	phrA	BSU12440	-	inhibitor of the activity of phosphatase RapA
1245	 47.33	0	1316470..1316712	-	80	16078310	yjpA	BSU12450	-	hypothetical protein
1246	 49.27	+1	1316849..1317802	+	317	16078311	xlyB	BSU12460	-	N-acetylmuramoyl-L-alanine amidase
1247	 43.92	0	1317839..1318216	-	125	16078312	yjqA	BSU12470	-	hypothetical protein
1248	 47.10	0	1318322..1318924	+	200	16078313	yjqB	BSU12480	-	hypothetical protein
1249	 48.63	+1	1319001..1319837	+	278	16078314	yjqC	BSU12490	-	hypothetical protein
1250	 44.72	0	1319881..1320477	-	198	50812221	xkdA	BSU12500	-	hypothetical protein
1251	 43.27	0	1320640..1320981	-	113	16078316	xre	BSU12510	-	transcriptional regulator
1252	 46.04	0	1321325..1322158	+	277	16078317	xkdB	BSU12520	-	hypothetical protein
43.31	MEAN

4.61	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.