IslandPath Analysis: Bacillus subtilis subsp. subtilis str. 168



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 43.31   STD DEV: 4.61
Bacillus subtilis subsp. subtilis str. 168, complete genome - 1..4214630
4105 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1002	 45.46	0	1074594..1075673	-	359	16078066	serC	BSU10020	-	phosphoserine aminotransferase
1003	 41.78	0	1075820..1076257	-	145	16078067	hit	BSU10030	-	Hit-like protein
1004	 46.37	0	1076745..1077488	+	247	16078068	ecsA	BSU10040	-	ABC transporter ATP-binding protein
1005	 46.29	0	1077481..1078707	+	408	16078069	ecsB	BSU10050	-	ABC transporter membrane protein
1006	 44.02	0	1078727..1079437	+	236	16078070	ecsC	BSU10060	-	hypothetical protein
1007	 50.04	+1	1079455..1080645	-	396	16078071	yhaA	BSU10070	-	hypothetical protein
1008	 49.28	+1	1080718..1082109	-	463	16078072	yhfA	BSU10080	-	hypothetical protein
1009	 43.81	0	1082175..1082489	-	104	16078073	yhgB	BSU10090	-	hypothetical protein
1010	 45.31	0	1082534..1083034	-	166	16078074	yhgC	BSU10100	-	hypothetical protein
1011	 45.69	0	1083156..1085300	+	714	16078075	pbpF	BSU10110	-	penicillin-binding protein 2C
1012	 47.83	0	1085422..1086483	+	353	16078076	hemE	BSU10120	-	uroporphyrinogen decarboxylase
1013	 45.44	0	1086555..1087487	+	310	16078077	hemH	BSU10130	-	ferrochelatase
1014	 48.48	+1	1087502..1088914	+	470	16078078	hemY	BSU10140	-	protoporphyrinogen oxidase
1015	 43.92	0	1089060..1089635	+	191	16078079	yhgD	BSU10150	-	hypothetical protein
1016	 44.54	0	1089706..1092033	+	775	16078080	yhgE	BSU10160	-	hypothetical protein
1017	 47.96	+1	1092075..1093052	-	325	16078081	fabHB	BSU10170	-	3-oxoacyl-(acyl carrier protein) synthase III
1018	 45.43	0	1093178..1093954	+	258	16078082	yhfC	BSU10180	-	hypothetical protein
1019	 38.73	0	1094045..1094248	-	67	16078083	yhfD	BSU10190	-	hypothetical protein
1020	 46.59	0	1094367..1095407	+	346	16078084	yhfE	BSU10200	-	hypothetical protein
1021	 43.38	0	1095420..1095827	+	135	16078085	yhfF	BSU10210	-	hypothetical protein
1022	 44.11	0	1095864..1097153	-	429	16078086	gltT	BSU10220	-	proton/sodium-glutamate symport protein
1023	 36.17	-1	1097424..1097564	-	46	16078087	yhfH	BSU10230	-	hypothetical protein
1024	 46.80	0	1097716..1098450	+	244	16078088	yhfI	BSU10240	-	hypothetical protein
1025	 42.17	0	1098463..1099458	+	331	16078089	yhfJ	BSU10250	-	hypothetical protein
1026	 49.15	+1	1099523..1100167	+	214	16078090	yhfK	BSU10260	-	hypothetical protein
1027	 49.48	+1	1100284..1101825	+	513	16078091	yhfL	BSU10270	-	acyl-CoA synthetase
1028	 39.90	0	1101864..1102259	-	131	16078092	yhfM	BSU10280	-	hypothetical protein
1029	 44.96	0	1102408..1103688	+	426	16078093	yhfN	BSU10290	-	hypothetical protein
1030	 46.25	0	1103727..1104872	-	381	16078094	aprE	BSU10300	-	serine alkaline protease (subtilisin E)
1031	 45.33	0	1105307..1105756	+	149	16078095	yhfO	BSU10310	-	hypothetical protein
1032	 50.35	+1	1105828..1106820	+	330	16078096	yhfP	BSU10320	-	hypothetical protein
1033	 44.79	0	1106962..1108008	+	348	16078097	yhfQ	BSU10330	-	hypothetical protein
1034	 47.25	0	1108040..1108621	-	193	16078098	yhfR	BSU10340	-	hypothetical protein
1035	 52.69	+2	1108692..1109786	-	364	16078099	yhfS	BSU10350	-	acetyl-CoA acetyltransferase
1036	 49.10	+1	1109783..1111222	-	479	16078100	yhfT	BSU10360	-	acyl-CoA synthetase
1037	 47.42	0	1111229..1111789	-	186	16078101	yhfU	BSU10370	-	hypothetical protein
1038	 41.19	0	1111924..1113222	-	432	16078102	hemAT	BSU10380	-	haem-based aerotactic transducer
1039	 45.69	0	1113361..1114890	-	509	16078103	yhfW	BSU10390	-	hypothetical protein
1040	 48.02	+1	1115002..1115859	+	285	16078104	yhxC	BSU10400	-	hypothetical protein
1041	 41.03	0	1115887..1116120	-	77	16078105	yhzC	BSU10410	-	hypothetical protein
1042	 44.04	0	1116413..1116991	+	192	16078106	comK	BSU10420	-	competence transcription factor (CTF)
1043	 48.78	+1	1117038..1117937	-	299	16078107	yhxD	BSU10430	-	hypothetical protein
1044	 45.93	0	1118154..1118423	+	89	16078108	yhjA	BSU10440	-	hypothetical protein
1045	 49.80	+1	1118466..1119935	-	489	16078109	yhjB	BSU10450	-	hypothetical protein
1046	 44.78	0	1119932..1120132	-	66	16078110	yhjC	BSU10460	-	hypothetical protein
1047	 40.22	0	1120340..1120702	-	120	16078111	yhjD	BSU10470	-	hypothetical protein
1048	 47.44	0	1120855..1121478	+	207	16078112	yhjE	BSU10480	-	hypothetical protein
1049	 41.42	0	1121480..1121986	+	168	16078113	sipV	BSU10490	-	type I signal peptidase
1050	 53.33	+2	1122166..1123665	+	499	16078114	yhjG	BSU10500	-	hypothetical protein
1051	 42.80	0	1123742..1124269	+	175	16078115	yhjH	BSU10510	-	hypothetical protein
1052	 33.58	-2	1124427..1125632	-	401	16078116	glcP	BSU10520	-	glucose/mannose:H+ symporter
1053	 37.32	-1	1125704..1126756	-	350	16078117	yhjJ	BSU10530	-	hypothetical protein
1054	 35.08	-1	1126759..1127619	-	286	16078118	yhjK	BSU10540	-	hypothetical protein
1055	 34.31	-1	1127591..1128916	-	441	16078119	yhjL	BSU10550	-	hypothetical protein
1056	 35.56	-1	1129020..1130009	+	329	16078120	yhjM	BSU10560	-	hypothetical protein
1057	 50.13	+1	1130223..1131377	-	384	16078121	yhjN	BSU10570	-	hypothetical protein
1058	 48.26	+1	1131484..1132689	-	401	16078122	yhjO	BSU10580	-	hypothetical protein
1059	 47.51	0	1132803..1134530	+	575	16078123	yhjP	BSU10590	-	hypothetical protein
1060	 49.54	+1	1134560..1134886	-	108	16078124	yhjQ	BSU10600	-	hypothetical protein
1061	 47.72	0	1135004..1135441	-	145	16078125	yhjR	BSU10610	-	hypothetical protein
1062	 49.04	+1	1135625..1139125	+	1166	16078126	addB	BSU10620	-	ATP-dependent deoxyribonuclease (subunit B)
1063	 48.77	+1	1139112..1142810	+	1232	16078127	addA	BSU10630	-	ATP-dependent deoxyribonuclease (subunit A)
1064	 51.62	+1	1142882..1144057	+	391	50812209	sbcD	BSU10640	-	exonuclease SbcD-like protein
1065	 48.10	+1	1144054..1147446	+	1130	16078129	yirY	BSU10650	-	hypothetical protein
1066	 45.21	0	1147460..1147762	+	100	16078130	yisB	BSU10660	-	hypothetical protein
1067	 44.30	0	1147799..1148026	-	75	16078131	gerPF	BSU10670	-	spore germination protein
1068	 46.02	0	1148049..1148450	-	133	16078132	gerPE	BSU10680	-	spore germination protein
1069	 46.89	0	1148450..1148626	-	58	16078133	gerPD	BSU10690	-	spore germination protein
1070	 44.01	0	1148623..1149240	-	205	16078134	gerPC	BSU10700	-	spore germination protein
1071	 49.79	+1	1149263..1149505	-	80	16078135	gerPB	BSU10710	-	spore germination protein
1072	 50.45	+1	1149511..1149732	-	73	16078136	gerPA	BSU10720	-	spore germination protein
1073	 36.26	-1	1150155..1150325	-	56	16078137	yisI	BSU10730	-	hypothetical protein
1074	 45.35	0	1150471..1151394	-	307	16078138	yisJ	BSU10740	-	hypothetical protein
1075	 46.47	0	1151549..1152454	+	301	16078139	yisK	BSU10750	-	hypothetical protein
1076	 45.38	0	1152570..1152926	+	118	16078140	yisL	BSU10760	-	hypothetical protein
1077	 44.92	0	1153094..1155778	+	894	16078141	wprA	BSU10770	-	cell wall-associated protein precursor (CWBP23, CWBP52)
1078	 48.47	+1	1155809..1156396	-	195	16078142	yisN	BSU10780	-	hypothetical protein
1079	 47.53	0	1156542..1158386	+	614	50812210	asnO	BSU10790	-	asparagine synthetase
1080	 34.38	-1	1158516..1158995	-	159	50812211	yizA	BSU10800	-	hypothetical protein
1081	 46.79	0	1159227..1160051	+	274	16078144	yisP	BSU10810	-	hypothetical protein
1082	 45.39	0	1160081..1161448	-	455	16078145	yisQ	BSU10820	-	hypothetical protein
1083	 47.45	0	1161572..1162435	+	287	16078146	yisR	BSU10830	-	hypothetical protein
1084	 47.63	0	1162453..1163466	+	337	16078147	degA	BSU10840	-	LacI family transcription regulator
1085	 48.40	+1	1163675..1164703	+	342	16078148	yisS	BSU10850	-	hypothetical protein
1086	 45.88	0	1164754..1165263	-	169	50812212	yisT	BSU10860	-	hypothetical protein
1087	 47.81	0	1165313..1165975	-	220	16078150	yisU	BSU10870	-	hypothetical protein
1088	 49.97	+1	1166042..1167496	+	484	50812213	yisV	BSU10880	-	hypothetical protein
1089	 44.91	0	1167504..1168142	-	212	16078153	yisX	BSU10890	-	hypothetical protein
1090	 47.46	0	1168348..1169154	+	268	16078154	yisY	BSU10900	-	hypothetical protein
1091	 46.83	0	1169182..1169781	-	199	16078155	yisZ	BSU10910	-	hypothetical protein
1092	 50.09	+1	1169778..1170947	-	389	50812214	sat	BSU10920	-	sulfate adenylyltransferase
1093	 48.24	+1	1171060..1171770	-	236	50812215	yitB	BSU10930	-	hypothetical protein
1094	 46.87	0	1171955..1172641	+	228	16078158	yitC	BSU10940	-	hypothetical protein
1095	 42.82	0	1172638..1173396	+	252	16078159	yitD	BSU10950	-	hypothetical protein
1096	 45.87	0	1173441..1174070	-	209	16078160	yitE	BSU10960	-	hypothetical protein
1097	 50.27	+1	1174166..1175281	-	371	16078161	yitF	BSU10970	-	hypothetical protein
1098	 45.63	0	1175290..1176558	-	422	16078162	yitG	BSU10980	-	hypothetical protein
1099	 46.41	0	1176670..1177518	-	282	16078163	yitH	BSU10990	-	hypothetical protein
1100	 49.03	+1	1177523..1177987	-	154	16078164	yitI	BSU11000	-	hypothetical protein
1101	 48.29	+1	1178062..1179900	-	612	16078165	yitJ	BSU11010	-	bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
43.31	MEAN

4.61	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.