version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 38 38.96 0 39207..39437 + 76 157690836 yabK BPUM_0038 - hypothetical protein 39 43.21 0 39505..43038 + 1177 157690837 mfd BPUM_0039 - transcription-repair coupling factor 40 43.39 0 43178..43714 + 178 157690838 spoVT BPUM_0040 - stage V sporulation protein T 41 45.17 +1 43909..45513 + 534 157690839 yabM BPUM_0041 - MOP superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter 42 44.51 0 45503..46987 + 494 157690840 yabN BPUM_0042 - tetrapyrrole methyltransferase family protein 43 39.46 0 46984..47244 + 86 157690841 yabO BPUM_0043 - S4 RNA-binding domain-containing protein 44 39.16 0 47319..47627 + 102 157690842 yabP BPUM_0044 - hypothetical protein 45 42.72 0 47624..48262 + 212 157690843 yabQ BPUM_0045 - hypothetical protein 46 39.20 0 48281..48655 + 124 157690844 divIC BPUM_0046 - cell-division initiation protein 47 39.35 0 48738..49136 + 132 157690845 yabR BPUM_0047 - hypothetical protein 48 41.22 0 49690..52173 + 827 157690846 spoIIE BPUM_0048 - phosphoprotein phosphatase 49 43.13 0 52250..52984 + 244 157690847 yabS BPUM_0049 - hypothetical protein 50 42.86 0 52968..53975 + 335 157690848 yabT BPUM_0050 - serine/threonine protein kinase 51 40.38 0 54072..55475 + 467 157690849 tilS BPUM_0051 - tRNA(Ile)-lysidine synthase 52 38.15 0 55491..56030 + 179 157690850 hprT BPUM_0052 - hypoxanthine phosphoribosyltransferase 53 43.88 0 56126..58030 + 634 157690851 ftsH BPUM_0053 - M41 family endopeptidase FtsH 54 41.51 0 58188..58970 + 260 157690852 yacB BPUM_0054 - pantothenate kinase 55 41.78 0 58986..59861 + 291 157690853 hslO BPUM_0055 - Hsp33-like chaperonin 56 40.37 0 59908..60816 + 302 157690854 yacD BPUM_0056 - peptidylprolyl isomerase 57 45.02 +1 60894..61817 + 307 157690855 cysK BPUM_0057 - cysteine synthase 58 42.92 0 61942..63360 + 472 157690856 pabB BPUM_0058 - anthranilate synthase component I 59 41.75 0 63374..63967 + 197 157690857 pabA BPUM_0059 - para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 60 41.93 0 63964..64812 + 282 157690858 pabC BPUM_0060 - 4-amino-4-deoxychorismate lyase 61 43.82 0 64823..65680 + 285 157690859 sul BPUM_0061 - dihydropteroate synthase 62 43.36 0 65697..66035 + 112 157690860 folB BPUM_0062 - dihydroneopterin aldolase 63 40.28 0 66032..66535 + 167 157690861 folK BPUM_0063 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 64 41.45 0 66487..66720 + 77 157690862 yazB BPUM_0064 - transcriptional regulator 65 44.01 0 66713..67714 + 333 157690863 yacF BPUM_0065 - dihydrouridine synthase 66 41.00 0 67805..69304 + 499 157690864 lysS BPUM_0066 - lysyl-tRNA synthetase 67 29.73 -2 70863..70973 + 36 157690865 - BPUM_0067 - hypothetical protein 68 37.20 -1 76194..76658 + 154 157690866 ctsR BPUM_0068 - transcriptional regulator CtsR 69 39.51 0 76664..77230 + 188 157690867 mcsA BPUM_0069 - transcriptional regulator 70 40.84 0 77235..78326 + 363 157690868 mcsB BPUM_0070 - ATP:guanido phosphotransferase 71 43.19 0 78323..80758 + 811 157690869 clpC BPUM_0071 - class III stress response-related ATPase 72 44.47 0 80912..82231 + 439 157690870 radA BPUM_0072 - DNA repair protein RadA 73 40.65 0 82234..83313 + 359 157690871 disA BPUM_0073 - DNA integrity scanning protein DisA 74 38.15 0 83467..84567 + 366 157690872 yacL BPUM_0074 - hypothetical protein 75 45.80 +1 84581..85270 + 229 157690873 ispD BPUM_0075 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 76 47.17 +1 85274..85750 + 158 157690874 ispF BPUM_0076 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 77 42.29 0 85845..87296 + 483 157690875 gltX BPUM_0077 - glutamyl-tRNA synthetase 78 46.18 +1 87608..88261 + 217 157690876 cysE BPUM_0078 - serine O-acetyltransferase 79 41.04 0 88258..89658 + 466 157690877 cysS BPUM_0079 - cysteinyl-tRNA synthetase 80 43.29 0 89662..90093 + 143 157690878 yazC BPUM_0080 - ribonuclease III 81 42.67 0 90077..90826 + 249 157690879 yacO BPUM_0081 - tRNA/rRNA methyltransferase 82 41.72 0 90829..91341 + 170 157690880 yacP BPUM_0082 - hypothetical protein 83 37.75 0 91405..92061 + 218 157690881 sigH BPUM_0083 - RNA polymerase factor sigma-70 84 34.67 -1 92138..92287 + 49 157690882 rpmGB BPUM_0084 - 50S ribosomal protein L33 85 30.51 -2 92323..92499 + 58 157690883 secE BPUM_0085 - preprotein translocase subunit SecE 86 41.01 0 92670..93203 + 177 157690884 nusG BPUM_0086 - transcription antitermination protein NusG 87 42.92 0 93321..93800 + 159 157690885 rplK BPUM_0087 - 50S ribosomal protein L11 88 42.06 0 93900..94598 + 232 157690886 rplA BPUM_0088 - 50S ribosomal protein L1 89 41.12 0 94857..95357 + 166 157690887 rplJ BPUM_0089 - 50S ribosomal protein L10 90 39.07 0 95399..95764 + 121 157690888 rplL BPUM_0090 - 50S ribosomal protein L7/L12 91 40.26 0 95862..96467 + 201 157690889 ybxB BPUM_0091 - 16S rRNA methyltransferase 92 27.33 -2 96554..96703 - 49 157690890 - BPUM_0092 - hypothetical protein 93 43.94 0 96714..100304 + 1196 157690891 rpoB BPUM_0093 - DNA-directed RNA polymerase subunit beta 94 43.56 0 100366..103965 + 1199 157690892 rpoC BPUM_0094 - DNA-directed RNA polymerase subunit beta' 95 40.96 0 104111..104359 + 82 157690893 ybxF BPUM_0095 - putative ribosomal protein L7Ae-like 96 44.05 0 104472..104891 + 139 157690894 rpsL BPUM_0096 - 30S ribosomal protein S12 97 42.89 0 105012..105482 + 156 157690895 rpsG BPUM_0097 - 30S ribosomal protein S7 98 43.10 0 105537..107615 + 692 157690896 fusA BPUM_0098 - elongation factor G 99 44.00 0 107734..108924 + 396 157690897 tufA BPUM_0099 - elongation factor Tu 100 39.17 0 109035..109994 + 319 157690898 ybaC BPUM_0100 - alpha/beta fold family hydrolase 101 38.51 0 110213..110521 + 102 157690899 rpsJ BPUM_0101 - 30S ribosomal protein S10 102 43.02 0 110559..111188 + 209 157690900 rplC BPUM_0102 - 50S ribosomal protein L3 103 43.43 0 111216..111839 + 207 157690901 rplD BPUM_0103 - 50S ribosomal protein L4 104 40.28 0 111839..112126 + 95 157690902 rplW BPUM_0104 - 50S ribosomal protein L23 105 44.12 0 112155..112988 + 277 157690903 rplB BPUM_0105 - 50S ribosomal protein L2 106 40.14 0 113046..113324 + 92 157690904 rpsS BPUM_0106 - 30S ribosomal protein S19 107 43.86 0 113342..113683 + 113 157690905 rplV BPUM_0107 - 50S ribosomal protein L22 108 43.23 0 113687..114343 + 218 157690906 rpsC BPUM_0108 - 30S ribosomal protein S3 109 42.53 0 114345..114779 + 144 157690907 rplP BPUM_0109 - 50S ribosomal protein L16 110 37.78 0 114745..114969 + 74 157690908 rpmC BPUM_0110 - 50S ribosomal protein L29 111 37.12 -1 114995..115258 + 87 157690909 rpsQ BPUM_0111 - 30S ribosomal protein S17 112 43.90 0 115298..115666 + 122 157690910 rplN BPUM_0112 - ribosomal protein L14 113 41.99 0 115702..116013 + 103 157690911 rplX BPUM_0113 - 50S ribosomal protein L24 114 40.56 0 116039..116578 + 179 157690912 rplE BPUM_0114 - 50S ribosomal protein L5 115 40.32 0 116601..116786 + 61 157690913 rpsN1 BPUM_0115 - ribosomal protein S14 116 39.35 0 116818..117216 + 132 157690914 rpsH BPUM_0116 - 30S ribosomal protein S8 117 41.85 0 117233..117784 + 183 157690915 rplF BPUM_0117 - 50S ribosomal protein L6 118 40.77 0 117817..118179 + 120 157690916 rplR BPUM_0118 - 50S ribosomal protein L18 119 43.71 0 118204..118704 + 166 157690917 rpsE BPUM_0119 - 30S ribosomal protein S5 120 40.44 0 118718..118900 + 60 157690918 rpmD BPUM_0120 - 50S ribosomal protein L30 121 41.50 0 118931..119371 + 146 157690919 rplO BPUM_0121 - 50S ribosomal protein L15 122 41.53 0 119373..120665 + 430 157690920 secY BPUM_0122 - preprotein translocase subunit SecY 123 40.67 0 120721..121374 + 217 157690921 adk BPUM_0123 - adenylate kinase 124 43.24 0 121371..122117 + 248 157690922 map BPUM_0124 - methionine aminopeptidase 125 37.90 0 122430..122648 + 72 157690923 infA BPUM_0126 - translation initiation factor IF-1 126 32.46 -2 122680..122793 + 37 157690924 rpmJ BPUM_0127 - 50S ribosomal protein L36 127 42.08 0 122815..123180 + 121 157690925 rpsM BPUM_0128 - 30S ribosomal protein S13 128 44.70 0 123201..123596 + 131 157690926 rpsK BPUM_0129 - 30S ribosomal protein S11 129 41.38 0 123772..124716 + 314 157690927 rpoA BPUM_0130 - DNA-directed RNA polymerase subunit alpha 130 45.73 +1 124793..125155 + 120 157690928 rplQ BPUM_0131 - 50S ribosomal protein L17 131 45.31 +1 125280..126122 + 280 157690929 ybxA BPUM_0132 - cobalt transporter ATP-binding subunit 132 46.09 +1 126098..126967 + 289 157690930 ybaE BPUM_0133 - cobalt transporter ATP-binding subunit 133 42.23 0 126964..127761 + 265 157690931 ybaF BPUM_0134 - cobalt ABC transporter 134 48.92 +2 127773..128516 + 247 157690932 truA BPUM_0135 - tRNA pseudouridine synthase A 135 42.69 0 128683..129120 + 145 157690933 rplM BPUM_0136 - 50S ribosomal protein L13 136 45.29 +1 129141..129533 + 130 157690934 rpsI BPUM_0137 - 30S ribosomal protein S9 137 40.12 0 129726..130241 + 171 157690935 ynaD BPUM_0138 - ribosomal protein acetyltransferase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.