version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 575 38.74 0 621147..622034 - 295 157691373 ybfP BPUM_0583 - AraC family transcription regulator 576 34.59 -1 622244..623116 + 290 157691374 ydeE BPUM_0584 - transcriptional regulator 577 38.19 0 623130..623705 + 191 157691375 - BPUM_0585 - acetyltransferase 578 39.86 0 623842..624408 - 188 157691376 - BPUM_0586 - acetyltransferase 579 41.40 0 624413..624598 - 61 157691377 - BPUM_0587 - hypothetical protein 580 36.45 -1 624778..625323 + 181 157691378 - BPUM_0588 - ECF family DNA-directed RNA polymerase sigma factor 581 36.99 -1 625292..626740 + 482 157691379 - BPUM_0589 - hypothetical protein 582 43.18 0 626759..627946 - 395 157691380 - BPUM_0590 - major facilitator transporter 583 43.59 0 628047..628943 + 298 157691381 lysR BPUM_0591 - LysR family transcriptional regulator 584 42.99 0 629305..630630 + 441 157691382 pbuG BPUM_0592 - NCS2 family nucleobase:cation symporter-2 585 43.45 0 631012..631812 + 266 157691383 yebC BPUM_0593 - hypothetical protein 586 39.39 0 631947..632573 + 208 157691384 yebE BPUM_0594 - hypothetical protein 587 42.79 0 632570..632770 + 66 157691385 yebG BPUM_0595 - hypothetical protein 588 46.01 +1 633121..633609 + 162 157691386 purE BPUM_0596 - phosphoribosylaminoimidazole carboxylase catalytic subunit 589 47.07 +1 633602..634744 + 380 157691387 purK BPUM_0597 - phosphoribosylaminoimidazole carboxylase ATPase subunit 590 43.52 0 634741..636036 + 431 157691388 purB BPUM_0598 - adenylosuccinate lyase 591 40.53 0 636109..636831 + 240 157691389 purC BPUM_0599 - phosphoribosylaminoimidazole-succinocarboxamide synthase 592 42.75 0 636824..637078 + 84 157691390 purS BPUM_0600 - phosphoribosylformylglycinamidine synthase subunit PurS 593 44.30 0 637075..637758 + 227 157691391 purQ BPUM_0601 - phosphoribosylformylglycinamidine synthase subunit I 594 45.47 +1 637742..639973 + 743 157691392 purL BPUM_0602 - phosphoribosylformylglycinamidine synthase II 595 46.61 +1 639949..641379 + 476 157691393 purF BPUM_0603 - amidophosphoribosyltransferase 596 44.67 0 641475..642515 + 346 157691394 purM BPUM_0604 - phosphoribosylaminoimidazole synthetase 597 45.26 +1 642512..643081 + 189 157691395 purN BPUM_0605 - phosphoribosylglycinamide formyltransferase 598 44.25 0 643097..644635 + 512 157691396 purH BPUM_0606 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 599 47.37 +1 644648..645922 + 424 157691397 purD BPUM_0607 - phosphoribosylamine--glycine ligase 600 28.58 -2 646194..649241 + 1015 157691398 - BPUM_0608 - helicase 601 27.69 -2 649392..649586 + 64 157691399 - BPUM_0609 - hypothetical protein 602 40.78 0 649608..650453 + 281 157691400 - BPUM_0610 - acetyltransferase 603 43.88 0 650448..652106 - 552 157691401 - BPUM_0611 - hypothetical protein 604 48.28 +1 652297..653661 + 454 157691402 yodT BPUM_0612 - hypothetical protein 605 46.14 +1 653674..654360 + 228 157691403 atoD BPUM_0613 - acetate CoA-transferase alpha subunit 606 48.35 +1 654336..655001 + 221 157691404 yodR BPUM_0614 - aetate CoA-transferase beta subunit 607 48.74 +2 655016..656287 + 423 157691405 yodQ BPUM_0615 - acetylornithine deacetylase 608 44.14 0 656372..656593 - 73 157691406 - BPUM_0616 - hypothetical protein 609 41.88 0 656718..658460 + 580 157691407 yerA BPUM_0617 - adenine deaminase 610 39.78 0 658728..658913 - 61 157691408 - BPUM_0618 - hypothetical protein 611 41.27 0 659010..659324 + 104 157691409 yerC BPUM_0619 - sporulation protein YerC 612 40.54 0 659384..659605 + 73 157691410 - BPUM_0620 - hypothetical protein 613 43.96 0 659623..661203 - 526 157691411 yerD BPUM_0621 - glutamate synthase (ferredoxin) 614 41.99 0 661343..661573 + 76 157691412 ybyB BPUM_0622 - hypothetical protein 615 39.13 0 661554..661967 - 137 157691413 - BPUM_0623 - hypothetical protein 616 41.48 0 662123..662932 + 269 157691414 pcrB BPUM_0624 - geranylgeranylglyceryl phosphate synthase-like protein 617 42.65 0 662990..665212 + 740 157691415 pcrA BPUM_0625 - ATP-dependent DNA helicase 618 44.25 0 665257..667263 + 668 157691416 ligA BPUM_0626 - NAD-dependent DNA ligase LigA 619 40.40 0 667279..668466 + 395 157691417 yerH BPUM_0627 - hypothetical protein 620 38.04 0 668567..669799 + 410 157691418 yfmI BPUM_0628 - major facilitator superfamily macrolide:cation transporter 621 40.68 0 669948..674360 + 1470 157691419 - BPUM_0629 - nonribosomal peptide synthetase subunit 622 41.63 0 674357..675898 + 513 157691420 pbpX BPUM_0630 - beta-lactamase 623 41.77 0 676838..677548 + 236 157691421 bacT BPUM_0631 - thioesterase 624 42.31 0 677545..678402 + 285 157691422 - BPUM_0632 - 3-hydroxybutyryl-CoA dehydrogenase 625 40.91 0 678417..679472 + 351 157691423 - BPUM_0633 - methoxymalonyl-ACP biosynthesis protein 626 38.15 0 679500..679769 + 89 157691424 - BPUM_0634 - hypothetical protein 627 43.57 0 679756..680898 + 380 157691425 - BPUM_0635 - acyl-CoA dehydrogenase (NADP(+)) 628 43.18 0 690025..692694 + 889 157691426 - BPUM_0636 - nonribosomal peptide synthetase subunit 629 44.90 +1 692687..697192 + 1501 157691427 - BPUM_0637 - polyketide synthase subunit 630 44.97 +1 697193..704443 + 2416 157691428 - BPUM_0638 - polyketide synthase subunit 631 43.52 0 704436..710846 + 2136 157691429 - BPUM_0639 - polyketide synthase subunit 632 42.76 0 710839..711846 + 335 157691430 yerI BPUM_0640 - homoserine kinase type II 633 44.56 0 711888..713294 - 468 157691431 phoB BPUM_0641 - alkaline phosphatase 634 43.29 0 713408..714100 - 230 157691432 sapB BPUM_0642 - membrane protein SapB 635 39.88 0 714264..715745 - 493 157691433 opuE BPUM_0643 - SSS family proline/sodium (Na+) symporter OpuE 636 39.18 0 716144..716434 + 96 157691434 gatC BPUM_0644 - aspartyl/glutamyl-tRNA amidotransferase subunit C 637 42.66 0 716449..717906 + 485 157691435 gatA BPUM_0645 - aspartyl/glutamyl-tRNA amidotransferase subunit A 638 43.61 0 717920..719350 + 476 157691436 gatB BPUM_0646 - aspartyl/glutamyl-tRNA amidotransferase subunit B 639 38.65 0 719533..720378 - 281 157691437 yerO BPUM_0647 - transcriptional regulator 640 41.43 0 720510..723734 + 1074 157691438 swrC BPUM_0648 - resistance-nodulation-cell division acriflavin:proton (H+) antiporter 641 42.87 0 723766..724719 - 317 157691439 - BPUM_0649 - purine nucleosidase 642 42.24 0 724901..725809 + 302 157691440 yerQ BPUM_0650 - putative lipid kinase 643 44.42 0 725867..727264 + 465 157691441 yefA BPUM_0651 - TrmA family RNA methyltransferase 644 31.99 -2 727814..729304 + 496 157691442 - BPUM_0652 - ATP-binding protein 645 33.08 -2 729297..732107 + 936 157691443 - BPUM_0653 - endonuclease 646 28.96 -2 732089..733117 + 342 157691444 - BPUM_0654 - hypothetical protein 647 32.32 -2 733114..734883 + 589 157691445 - BPUM_0655 - hypothetical protein 648 31.33 -2 734880..736526 - 548 157691446 - BPUM_0656 - DNA (cytosine-5-)-methyltransferase 649 44.00 0 736808..737782 + 324 157691447 yfjN BPUM_0657 - tRNA-dihydrouridine synthase 650 40.62 0 737890..738342 + 150 157691448 - BPUM_0658 - hypothetical protein 651 35.56 -1 738474..739238 - 254 157691449 glvR BPUM_0659 - transcriptional regulator 652 40.29 0 739387..740967 + 526 157691450 malP BPUM_0660 - PTS family porter component IIBC 653 39.43 0 740994..742322 + 442 157691451 glvA BPUM_0661 - maltose-6'-phosphate glucosidase 654 42.20 0 742435..742806 - 123 157691452 - BPUM_0662 - hypothetical protein 655 38.58 0 742990..743427 + 145 157691453 - BPUM_0663 - transcriptional regulator 656 43.72 0 743493..744407 + 304 157691454 - BPUM_0664 - thioredoxin-disulfide reductase 657 39.80 0 744417..744617 - 66 157691455 - BPUM_0665 - hypothetical protein 658 41.67 0 744731..745378 + 215 157691456 - BPUM_0666 - hypothetical protein 659 43.64 0 745412..746740 - 442 157691457 licH1 BPUM_0667 - 6-phospho-beta-glucosidase 660 38.52 0 746940..747671 + 243 157691458 - BPUM_0668 - transcriptional regulator 661 45.42 +1 749039..749518 + 159 157691459 - BPUM_0671 - prolyl-tRNA synthetase 662 43.40 0 749549..750502 - 317 157691460 cisL BPUM_0672 - LysR family transcriptional regulator 663 45.17 +1 750561..751760 + 399 157691461 - BPUM_0673 - major facilitator transporter 664 38.70 0 751825..752904 - 359 157691462 yetN BPUM_0674 - hypothetical protein 665 38.00 0 753103..753252 - 49 157691463 - BPUM_0675 - hypothetical protein 666 43.14 0 753608..754372 + 254 157691464 yfnH BPUM_0676 - glucose-1-phosphate cytidylyltransferase 667 43.58 0 754344..755348 + 334 157691465 yfnG BPUM_0677 - NAD-dependent epimerase/dehydratase 668 44.52 0 755361..756272 + 303 157691466 yfnF BPUM_0678 - glycosyltransferase 669 41.81 0 756269..757459 + 396 157691467 yfnE BPUM_0679 - glycosyltransferase 670 38.92 0 757460..758389 + 309 157691468 yfnD BPUM_0680 - glycosyltransferase 671 44.87 +1 758425..759663 - 412 157691469 - BPUM_0681 - major facilitator superfamily fosmidomycin:cation antiporter 672 30.13 -2 759663..759818 + 51 157691470 - BPUM_0682 - hypothetical protein 673 42.45 0 759997..762036 - 679 157691471 - BPUM_0683 - penicillin-binding protein 674 43.43 0 762298..763713 + 471 157691472 - BPUM_0684 - DASS family divalent anion:sodium (Na+) symporter 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.