version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 550 32.97 -2 596179..596457 + 92 157691348 yddA BPUM_0557 - hypothetical protein 551 37.17 -1 596536..597186 + 216 157691349 - BPUM_0558 - hypothetical protein 552 37.74 0 597247..599790 + 847 157691350 - BPUM_0559 - hypothetical protein 553 26.06 -2 600179..601003 - 274 157691351 - BPUM_0560 - hypothetical protein 554 42.24 0 601232..602017 + 261 157691352 ydiP BPUM_0561 - DNA (cytosine-5-)-methyltransferase 555 35.69 -1 602089..602385 + 98 157691353 - BPUM_0562 - hypothetical protein 556 39.01 0 602375..602656 + 93 157691354 - BPUM_0563 - hypothetical protein 557 34.86 -1 602685..603077 + 130 157691355 - BPUM_0564 - hypothetical protein 558 36.91 -1 603074..604303 + 409 157691356 - BPUM_0565 - type II/IV secretion system protein 559 33.21 -2 604290..605102 + 270 157691357 - BPUM_0566 - hypothetical protein 560 36.35 -1 605107..605868 + 253 157691358 - BPUM_0567 - hypothetical protein 561 33.33 -2 605875..606234 + 119 157691359 - BPUM_0568 - hypothetical protein 562 40.48 0 606407..606574 + 55 157691360 - BPUM_0569 - hypothetical protein 563 32.93 -2 606833..607081 + 82 157691361 - BPUM_0570 - hypothetical protein 564 34.44 -1 607062..608057 + 331 157691362 yddB BPUM_0571 - hypothetical protein 565 39.08 0 608069..608329 + 86 157691363 yddC BPUM_0572 - hypothetical protein 566 31.84 -2 608341..608808 + 155 157691364 yddD BPUM_0573 - hypothetical protein 567 36.22 -1 608786..611242 + 818 157691365 yddE BPUM_0574 - hypothetical protein 568 36.48 -1 612013..614394 + 793 157691366 yddG BPUM_0575 - hypothetical protein 569 40.18 0 614391..615368 + 325 157691367 yddH BPUM_0576 - C40 family peptidase 570 35.16 -1 615378..615869 + 163 157691368 yddI BPUM_0577 - hypothetical protein 571 35.24 -1 615897..616106 + 69 157691369 - BPUM_0578 - hypothetical protein 572 34.27 -1 616312..617589 + 425 157691370 int BPUM_0580 - integrase 573 31.07 -2 617863..618921 - 352 157691371 - BPUM_0581 - AraC family transcription regulator 574 38.51 0 618922..620583 - 553 157691372 - BPUM_0582 - 2-isopropylmalate synthase 575 38.74 0 621147..622034 - 295 157691373 ybfP BPUM_0583 - AraC family transcription regulator 576 34.59 -1 622244..623116 + 290 157691374 ydeE BPUM_0584 - transcriptional regulator 577 38.19 0 623130..623705 + 191 157691375 - BPUM_0585 - acetyltransferase 578 39.86 0 623842..624408 - 188 157691376 - BPUM_0586 - acetyltransferase 579 41.40 0 624413..624598 - 61 157691377 - BPUM_0587 - hypothetical protein 580 36.45 -1 624778..625323 + 181 157691378 - BPUM_0588 - ECF family DNA-directed RNA polymerase sigma factor 581 36.99 -1 625292..626740 + 482 157691379 - BPUM_0589 - hypothetical protein 582 43.18 0 626759..627946 - 395 157691380 - BPUM_0590 - major facilitator transporter 583 43.59 0 628047..628943 + 298 157691381 lysR BPUM_0591 - LysR family transcriptional regulator 584 42.99 0 629305..630630 + 441 157691382 pbuG BPUM_0592 - NCS2 family nucleobase:cation symporter-2 585 43.45 0 631012..631812 + 266 157691383 yebC BPUM_0593 - hypothetical protein 586 39.39 0 631947..632573 + 208 157691384 yebE BPUM_0594 - hypothetical protein 587 42.79 0 632570..632770 + 66 157691385 yebG BPUM_0595 - hypothetical protein 588 46.01 +1 633121..633609 + 162 157691386 purE BPUM_0596 - phosphoribosylaminoimidazole carboxylase catalytic subunit 589 47.07 +1 633602..634744 + 380 157691387 purK BPUM_0597 - phosphoribosylaminoimidazole carboxylase ATPase subunit 590 43.52 0 634741..636036 + 431 157691388 purB BPUM_0598 - adenylosuccinate lyase 591 40.53 0 636109..636831 + 240 157691389 purC BPUM_0599 - phosphoribosylaminoimidazole-succinocarboxamide synthase 592 42.75 0 636824..637078 + 84 157691390 purS BPUM_0600 - phosphoribosylformylglycinamidine synthase subunit PurS 593 44.30 0 637075..637758 + 227 157691391 purQ BPUM_0601 - phosphoribosylformylglycinamidine synthase subunit I 594 45.47 +1 637742..639973 + 743 157691392 purL BPUM_0602 - phosphoribosylformylglycinamidine synthase II 595 46.61 +1 639949..641379 + 476 157691393 purF BPUM_0603 - amidophosphoribosyltransferase 596 44.67 0 641475..642515 + 346 157691394 purM BPUM_0604 - phosphoribosylaminoimidazole synthetase 597 45.26 +1 642512..643081 + 189 157691395 purN BPUM_0605 - phosphoribosylglycinamide formyltransferase 598 44.25 0 643097..644635 + 512 157691396 purH BPUM_0606 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 599 47.37 +1 644648..645922 + 424 157691397 purD BPUM_0607 - phosphoribosylamine--glycine ligase 600 28.58 -2 646194..649241 + 1015 157691398 - BPUM_0608 - helicase 601 27.69 -2 649392..649586 + 64 157691399 - BPUM_0609 - hypothetical protein 602 40.78 0 649608..650453 + 281 157691400 - BPUM_0610 - acetyltransferase 603 43.88 0 650448..652106 - 552 157691401 - BPUM_0611 - hypothetical protein 604 48.28 +1 652297..653661 + 454 157691402 yodT BPUM_0612 - hypothetical protein 605 46.14 +1 653674..654360 + 228 157691403 atoD BPUM_0613 - acetate CoA-transferase alpha subunit 606 48.35 +1 654336..655001 + 221 157691404 yodR BPUM_0614 - aetate CoA-transferase beta subunit 607 48.74 +2 655016..656287 + 423 157691405 yodQ BPUM_0615 - acetylornithine deacetylase 608 44.14 0 656372..656593 - 73 157691406 - BPUM_0616 - hypothetical protein 609 41.88 0 656718..658460 + 580 157691407 yerA BPUM_0617 - adenine deaminase 610 39.78 0 658728..658913 - 61 157691408 - BPUM_0618 - hypothetical protein 611 41.27 0 659010..659324 + 104 157691409 yerC BPUM_0619 - sporulation protein YerC 612 40.54 0 659384..659605 + 73 157691410 - BPUM_0620 - hypothetical protein 613 43.96 0 659623..661203 - 526 157691411 yerD BPUM_0621 - glutamate synthase (ferredoxin) 614 41.99 0 661343..661573 + 76 157691412 ybyB BPUM_0622 - hypothetical protein 615 39.13 0 661554..661967 - 137 157691413 - BPUM_0623 - hypothetical protein 616 41.48 0 662123..662932 + 269 157691414 pcrB BPUM_0624 - geranylgeranylglyceryl phosphate synthase-like protein 617 42.65 0 662990..665212 + 740 157691415 pcrA BPUM_0625 - ATP-dependent DNA helicase 618 44.25 0 665257..667263 + 668 157691416 ligA BPUM_0626 - NAD-dependent DNA ligase LigA 619 40.40 0 667279..668466 + 395 157691417 yerH BPUM_0627 - hypothetical protein 620 38.04 0 668567..669799 + 410 157691418 yfmI BPUM_0628 - major facilitator superfamily macrolide:cation transporter 621 40.68 0 669948..674360 + 1470 157691419 - BPUM_0629 - nonribosomal peptide synthetase subunit 622 41.63 0 674357..675898 + 513 157691420 pbpX BPUM_0630 - beta-lactamase 623 41.77 0 676838..677548 + 236 157691421 bacT BPUM_0631 - thioesterase 624 42.31 0 677545..678402 + 285 157691422 - BPUM_0632 - 3-hydroxybutyryl-CoA dehydrogenase 625 40.91 0 678417..679472 + 351 157691423 - BPUM_0633 - methoxymalonyl-ACP biosynthesis protein 626 38.15 0 679500..679769 + 89 157691424 - BPUM_0634 - hypothetical protein 627 43.57 0 679756..680898 + 380 157691425 - BPUM_0635 - acyl-CoA dehydrogenase (NADP(+)) 628 43.18 0 690025..692694 + 889 157691426 - BPUM_0636 - nonribosomal peptide synthetase subunit 629 44.90 +1 692687..697192 + 1501 157691427 - BPUM_0637 - polyketide synthase subunit 630 44.97 +1 697193..704443 + 2416 157691428 - BPUM_0638 - polyketide synthase subunit 631 43.52 0 704436..710846 + 2136 157691429 - BPUM_0639 - polyketide synthase subunit 632 42.76 0 710839..711846 + 335 157691430 yerI BPUM_0640 - homoserine kinase type II 633 44.56 0 711888..713294 - 468 157691431 phoB BPUM_0641 - alkaline phosphatase 634 43.29 0 713408..714100 - 230 157691432 sapB BPUM_0642 - membrane protein SapB 635 39.88 0 714264..715745 - 493 157691433 opuE BPUM_0643 - SSS family proline/sodium (Na+) symporter OpuE 636 39.18 0 716144..716434 + 96 157691434 gatC BPUM_0644 - aspartyl/glutamyl-tRNA amidotransferase subunit C 637 42.66 0 716449..717906 + 485 157691435 gatA BPUM_0645 - aspartyl/glutamyl-tRNA amidotransferase subunit A 638 43.61 0 717920..719350 + 476 157691436 gatB BPUM_0646 - aspartyl/glutamyl-tRNA amidotransferase subunit B 639 38.65 0 719533..720378 - 281 157691437 yerO BPUM_0647 - transcriptional regulator 640 41.43 0 720510..723734 + 1074 157691438 swrC BPUM_0648 - resistance-nodulation-cell division acriflavin:proton (H+) antiporter 641 42.87 0 723766..724719 - 317 157691439 - BPUM_0649 - purine nucleosidase 642 42.24 0 724901..725809 + 302 157691440 yerQ BPUM_0650 - putative lipid kinase 643 44.42 0 725867..727264 + 465 157691441 yefA BPUM_0651 - TrmA family RNA methyltransferase 644 31.99 -2 727814..729304 + 496 157691442 - BPUM_0652 - ATP-binding protein 645 33.08 -2 729297..732107 + 936 157691443 - BPUM_0653 - endonuclease 646 28.96 -2 732089..733117 + 342 157691444 - BPUM_0654 - hypothetical protein 647 32.32 -2 733114..734883 + 589 157691445 - BPUM_0655 - hypothetical protein 648 31.33 -2 734880..736526 - 548 157691446 - BPUM_0656 - DNA (cytosine-5-)-methyltransferase 649 44.00 0 736808..737782 + 324 157691447 yfjN BPUM_0657 - tRNA-dihydrouridine synthase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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