version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 515 36.74 -1 554650..554913 + 87 157691313 bofA BPUM_0520 - sigma-K factor-processing regulatory protein BofA 516 42.02 0 560530..561507 + 325 157691314 thiL BPUM_0521 - thiamine monophosphate kinase 517 43.59 0 561530..561997 + 155 157691315 ydiB BPUM_0522 - ATP-binding protein 518 43.04 0 561978..562667 + 229 157691316 ydiC BPUM_0523 - M22 family peptidase 519 39.49 0 562651..563121 + 156 157691317 rimI BPUM_0524 - ribosomal-protein-alanine N-acetyltransferase 520 44.31 0 563114..564142 + 342 157691318 gcp BPUM_0525 - O-sialoglycoprotein endopeptidase 521 41.55 0 564414..566336 - 640 157691319 ydiF BPUM_0526 - ABC transporter ATP-binding protein 522 41.67 0 566476..566967 + 163 157691320 moaC BPUM_0527 - molybdenum cofactor biosynthesis protein C 523 40.52 0 566983..567636 + 217 157691321 rex BPUM_0528 - redox-sensing transcriptional repressor Rex 524 40.56 0 567664..567843 + 59 157691322 tatAY BPUM_0529 - TAT family twin arginine targeting transporter 525 40.78 0 567850..568614 + 254 157691323 tatCY BPUM_0530 - TAT family twin arginine targeting transporter 526 40.99 0 568653..569279 - 208 157691324 - BPUM_0531 - hydrolase 527 38.46 0 569336..569530 - 64 157691325 ydiK BPUM_0532 - hypothetical protein 528 39.59 0 569527..570261 - 244 157691326 ydiL BPUM_0533 - hypothetical protein 529 41.40 0 570492..570776 + 94 157691327 groES BPUM_0534 - co-chaperonin GroES 530 44.16 0 570832..572466 + 544 157691328 groEL BPUM_0535 - chaperonin GroEL 531 37.61 0 573469..573936 - 155 157691329 - BPUM_0537 - hypothetical protein 532 43.26 0 574061..574735 - 224 157691330 - BPUM_0538 - hypothetical protein 533 36.59 -1 574946..575314 + 122 157691331 ydjM BPUM_0539 - hypothetical protein 534 39.14 0 575388..576437 + 349 157691332 ydjN BPUM_0540 - hypothetical protein 535 36.00 -1 576653..577027 - 124 157691333 - BPUM_0541 - 4-carboxymuconolactone decarboxylase 536 43.73 0 577315..578844 - 509 157691334 cotA BPUM_0542 - outer spore coat protein A 537 42.64 0 578944..580350 - 468 157691335 gabP BPUM_0543 - APC family amino acid-polyamine-organocation transporter 538 43.11 0 580815..581714 + 299 157691336 yeaB BPUM_0544 - CDF family cation diffusion facilitator 539 45.28 +1 581816..582778 + 320 157691337 yeaC BPUM_0545 - methanol dehydrogenase regulatory protein 540 44.50 0 582775..583965 + 396 157691338 yeaD BPUM_0546 - hypothetical protein 541 43.95 0 583975..586179 + 734 157691339 yebA BPUM_0547 - hypothetical protein 542 44.16 0 586366..587907 + 513 157691340 guaA BPUM_0548 - bifunctional GMP synthase/glutamine amidotransferase protein 543 28.42 -2 588295..589413 + 372 157691341 yopK BPUM_0549 - spore transcriptional regulator YopK 544 27.39 -2 589733..590119 - 128 157691342 - BPUM_0550 - transcriptional regulator 545 35.80 -1 590560..590802 + 80 157691343 - BPUM_0552 - hypothetical protein 546 26.60 -2 592152..593117 + 321 157691344 - BPUM_0553 - hypothetical protein 547 34.76 -1 593151..594485 + 444 157691345 ydcQ BPUM_0554 - FtsK/SpoIIIE family protein 548 33.97 -1 594559..595659 + 366 157691346 ydcR BPUM_0555 - transcriptional regulator 549 35.27 -1 595915..596172 + 85 157691347 - BPUM_0556 - hypothetical protein 550 32.97 -2 596179..596457 + 92 157691348 yddA BPUM_0557 - hypothetical protein 551 37.17 -1 596536..597186 + 216 157691349 - BPUM_0558 - hypothetical protein 552 37.74 0 597247..599790 + 847 157691350 - BPUM_0559 - hypothetical protein 553 26.06 -2 600179..601003 - 274 157691351 - BPUM_0560 - hypothetical protein 554 42.24 0 601232..602017 + 261 157691352 ydiP BPUM_0561 - DNA (cytosine-5-)-methyltransferase 555 35.69 -1 602089..602385 + 98 157691353 - BPUM_0562 - hypothetical protein 556 39.01 0 602375..602656 + 93 157691354 - BPUM_0563 - hypothetical protein 557 34.86 -1 602685..603077 + 130 157691355 - BPUM_0564 - hypothetical protein 558 36.91 -1 603074..604303 + 409 157691356 - BPUM_0565 - type II/IV secretion system protein 559 33.21 -2 604290..605102 + 270 157691357 - BPUM_0566 - hypothetical protein 560 36.35 -1 605107..605868 + 253 157691358 - BPUM_0567 - hypothetical protein 561 33.33 -2 605875..606234 + 119 157691359 - BPUM_0568 - hypothetical protein 562 40.48 0 606407..606574 + 55 157691360 - BPUM_0569 - hypothetical protein 563 32.93 -2 606833..607081 + 82 157691361 - BPUM_0570 - hypothetical protein 564 34.44 -1 607062..608057 + 331 157691362 yddB BPUM_0571 - hypothetical protein 565 39.08 0 608069..608329 + 86 157691363 yddC BPUM_0572 - hypothetical protein 566 31.84 -2 608341..608808 + 155 157691364 yddD BPUM_0573 - hypothetical protein 567 36.22 -1 608786..611242 + 818 157691365 yddE BPUM_0574 - hypothetical protein 568 36.48 -1 612013..614394 + 793 157691366 yddG BPUM_0575 - hypothetical protein 569 40.18 0 614391..615368 + 325 157691367 yddH BPUM_0576 - C40 family peptidase 570 35.16 -1 615378..615869 + 163 157691368 yddI BPUM_0577 - hypothetical protein 571 35.24 -1 615897..616106 + 69 157691369 - BPUM_0578 - hypothetical protein 572 34.27 -1 616312..617589 + 425 157691370 int BPUM_0580 - integrase 573 31.07 -2 617863..618921 - 352 157691371 - BPUM_0581 - AraC family transcription regulator 574 38.51 0 618922..620583 - 553 157691372 - BPUM_0582 - 2-isopropylmalate synthase 575 38.74 0 621147..622034 - 295 157691373 ybfP BPUM_0583 - AraC family transcription regulator 576 34.59 -1 622244..623116 + 290 157691374 ydeE BPUM_0584 - transcriptional regulator 577 38.19 0 623130..623705 + 191 157691375 - BPUM_0585 - acetyltransferase 578 39.86 0 623842..624408 - 188 157691376 - BPUM_0586 - acetyltransferase 579 41.40 0 624413..624598 - 61 157691377 - BPUM_0587 - hypothetical protein 580 36.45 -1 624778..625323 + 181 157691378 - BPUM_0588 - ECF family DNA-directed RNA polymerase sigma factor 581 36.99 -1 625292..626740 + 482 157691379 - BPUM_0589 - hypothetical protein 582 43.18 0 626759..627946 - 395 157691380 - BPUM_0590 - major facilitator transporter 583 43.59 0 628047..628943 + 298 157691381 lysR BPUM_0591 - LysR family transcriptional regulator 584 42.99 0 629305..630630 + 441 157691382 pbuG BPUM_0592 - NCS2 family nucleobase:cation symporter-2 585 43.45 0 631012..631812 + 266 157691383 yebC BPUM_0593 - hypothetical protein 586 39.39 0 631947..632573 + 208 157691384 yebE BPUM_0594 - hypothetical protein 587 42.79 0 632570..632770 + 66 157691385 yebG BPUM_0595 - hypothetical protein 588 46.01 +1 633121..633609 + 162 157691386 purE BPUM_0596 - phosphoribosylaminoimidazole carboxylase catalytic subunit 589 47.07 +1 633602..634744 + 380 157691387 purK BPUM_0597 - phosphoribosylaminoimidazole carboxylase ATPase subunit 590 43.52 0 634741..636036 + 431 157691388 purB BPUM_0598 - adenylosuccinate lyase 591 40.53 0 636109..636831 + 240 157691389 purC BPUM_0599 - phosphoribosylaminoimidazole-succinocarboxamide synthase 592 42.75 0 636824..637078 + 84 157691390 purS BPUM_0600 - phosphoribosylformylglycinamidine synthase subunit PurS 593 44.30 0 637075..637758 + 227 157691391 purQ BPUM_0601 - phosphoribosylformylglycinamidine synthase subunit I 594 45.47 +1 637742..639973 + 743 157691392 purL BPUM_0602 - phosphoribosylformylglycinamidine synthase II 595 46.61 +1 639949..641379 + 476 157691393 purF BPUM_0603 - amidophosphoribosyltransferase 596 44.67 0 641475..642515 + 346 157691394 purM BPUM_0604 - phosphoribosylaminoimidazole synthetase 597 45.26 +1 642512..643081 + 189 157691395 purN BPUM_0605 - phosphoribosylglycinamide formyltransferase 598 44.25 0 643097..644635 + 512 157691396 purH BPUM_0606 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 599 47.37 +1 644648..645922 + 424 157691397 purD BPUM_0607 - phosphoribosylamine--glycine ligase 600 28.58 -2 646194..649241 + 1015 157691398 - BPUM_0608 - helicase 601 27.69 -2 649392..649586 + 64 157691399 - BPUM_0609 - hypothetical protein 602 40.78 0 649608..650453 + 281 157691400 - BPUM_0610 - acetyltransferase 603 43.88 0 650448..652106 - 552 157691401 - BPUM_0611 - hypothetical protein 604 48.28 +1 652297..653661 + 454 157691402 yodT BPUM_0612 - hypothetical protein 605 46.14 +1 653674..654360 + 228 157691403 atoD BPUM_0613 - acetate CoA-transferase alpha subunit 606 48.35 +1 654336..655001 + 221 157691404 yodR BPUM_0614 - aetate CoA-transferase beta subunit 607 48.74 +2 655016..656287 + 423 157691405 yodQ BPUM_0615 - acetylornithine deacetylase 608 44.14 0 656372..656593 - 73 157691406 - BPUM_0616 - hypothetical protein 609 41.88 0 656718..658460 + 580 157691407 yerA BPUM_0617 - adenine deaminase 610 39.78 0 658728..658913 - 61 157691408 - BPUM_0618 - hypothetical protein 611 41.27 0 659010..659324 + 104 157691409 yerC BPUM_0619 - sporulation protein YerC 612 40.54 0 659384..659605 + 73 157691410 - BPUM_0620 - hypothetical protein 613 43.96 0 659623..661203 - 526 157691411 yerD BPUM_0621 - glutamate synthase (ferredoxin) 614 41.99 0 661343..661573 + 76 157691412 ybyB BPUM_0622 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0