version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 482 41.70 0 520223..520879 + 218 157691280 - BPUM_0487 - nitroreductase family protein 483 45.11 +1 520897..521949 + 350 157691281 - BPUM_0488 - hypothetical protein 484 39.13 0 521997..522203 - 68 157691282 - BPUM_0489 - hypothetical protein 485 38.05 0 522253..522591 + 112 157691283 - BPUM_0490 - hypothetical protein 486 40.90 0 522633..523187 - 184 157691284 - BPUM_0491 - transcriptional regulator 487 39.12 0 523299..523886 + 195 157691285 - BPUM_0492 - homoserine/threonine resistance transporter 488 43.66 0 523891..524442 - 183 157691286 - BPUM_0493 - acetyltransferase 489 35.05 -1 524565..525554 - 329 157691287 - BPUM_0494 - LysR family transcriptional regulator 490 41.32 0 525608..526396 + 262 157691288 - BPUM_0495 - aldo/keto dehydrogenase 491 35.48 -1 526559..526744 + 61 157691289 - BPUM_0496 - hypothetical protein 492 41.78 0 526893..527555 + 220 157691290 - BPUM_0497 - O-methyltransferase 493 43.93 0 527592..527912 - 106 157691291 - BPUM_0498 - hypothetical protein 494 43.11 0 527909..528634 - 241 157691292 azlC BPUM_0499 - LIV-E family branched chain amino acid exporter 495 43.95 0 528929..529804 + 291 157691293 - BPUM_0500 - DMT family permease 496 43.25 0 530048..531298 - 416 157691294 - BPUM_0501 - DAACS family dicarboxylate/amino acid:cation symporter 497 27.49 -2 531363..531533 + 56 157691295 - BPUM_0502 - hypothetical protein 498 37.15 -1 537040..538008 - 322 157691296 yaaC BPUM_0503 - hypothetical protein 499 40.35 0 538130..539596 + 488 157691297 guaB BPUM_0504 - inositol-5-monophosphate dehydrogenase 500 40.50 0 539757..541082 + 441 157691298 dacA BPUM_0505 - serine-type D-Ala-D-Ala carboxypeptidase 501 42.12 0 541123..542601 - 492 157691299 - BPUM_0506 - GntR family transcriptional regulator 502 46.21 +1 542847..543731 + 294 157691300 yaaD BPUM_0507 - pyridoxine biosynthesis protein 503 43.99 0 543752..544342 + 196 157691301 yaaE BPUM_0508 - glutamine amidotransferase subunit PdxT 504 42.04 0 544662..545936 + 424 157691302 serS BPUM_0509 - seryl-tRNA synthetase 505 38.27 0 546039..546869 + 276 157691303 - BPUM_0510 - chemotaxis sensory transducer 506 38.79 0 547179..547838 - 219 157691304 dck BPUM_0511 - deoxynucleoside kinase 507 36.54 -1 547835..548458 - 207 157691305 dgk BPUM_0512 - deoxyguanosine kinase 508 39.48 0 548538..549839 - 433 157691306 yaaH BPUM_0513 - spore germination protein 509 36.76 -1 549885..550439 - 184 157691307 yaaI BPUM_0514 - cysteine hydrolase family protein 510 40.88 0 550519..550995 + 158 157691308 yaaJ BPUM_0515 - nucleoside deaminase 511 40.40 0 551666..553378 + 570 157691309 dnaX BPUM_0516 - DNA polymerase III subunits gamma and tau 512 37.39 -1 553384..553728 + 114 157691310 yaaK BPUM_0517 - hypothetical protein 513 40.87 0 553744..554340 + 198 157691311 recR BPUM_0518 - recombination protein RecR 514 35.11 -1 554359..554583 + 74 157691312 yaaL BPUM_0519 - hypothetical protein 515 36.74 -1 554650..554913 + 87 157691313 bofA BPUM_0520 - sigma-K factor-processing regulatory protein BofA 516 42.02 0 560530..561507 + 325 157691314 thiL BPUM_0521 - thiamine monophosphate kinase 517 43.59 0 561530..561997 + 155 157691315 ydiB BPUM_0522 - ATP-binding protein 518 43.04 0 561978..562667 + 229 157691316 ydiC BPUM_0523 - M22 family peptidase 519 39.49 0 562651..563121 + 156 157691317 rimI BPUM_0524 - ribosomal-protein-alanine N-acetyltransferase 520 44.31 0 563114..564142 + 342 157691318 gcp BPUM_0525 - O-sialoglycoprotein endopeptidase 521 41.55 0 564414..566336 - 640 157691319 ydiF BPUM_0526 - ABC transporter ATP-binding protein 522 41.67 0 566476..566967 + 163 157691320 moaC BPUM_0527 - molybdenum cofactor biosynthesis protein C 523 40.52 0 566983..567636 + 217 157691321 rex BPUM_0528 - redox-sensing transcriptional repressor Rex 524 40.56 0 567664..567843 + 59 157691322 tatAY BPUM_0529 - TAT family twin arginine targeting transporter 525 40.78 0 567850..568614 + 254 157691323 tatCY BPUM_0530 - TAT family twin arginine targeting transporter 526 40.99 0 568653..569279 - 208 157691324 - BPUM_0531 - hydrolase 527 38.46 0 569336..569530 - 64 157691325 ydiK BPUM_0532 - hypothetical protein 528 39.59 0 569527..570261 - 244 157691326 ydiL BPUM_0533 - hypothetical protein 529 41.40 0 570492..570776 + 94 157691327 groES BPUM_0534 - co-chaperonin GroES 530 44.16 0 570832..572466 + 544 157691328 groEL BPUM_0535 - chaperonin GroEL 531 37.61 0 573469..573936 - 155 157691329 - BPUM_0537 - hypothetical protein 532 43.26 0 574061..574735 - 224 157691330 - BPUM_0538 - hypothetical protein 533 36.59 -1 574946..575314 + 122 157691331 ydjM BPUM_0539 - hypothetical protein 534 39.14 0 575388..576437 + 349 157691332 ydjN BPUM_0540 - hypothetical protein 535 36.00 -1 576653..577027 - 124 157691333 - BPUM_0541 - 4-carboxymuconolactone decarboxylase 536 43.73 0 577315..578844 - 509 157691334 cotA BPUM_0542 - outer spore coat protein A 537 42.64 0 578944..580350 - 468 157691335 gabP BPUM_0543 - APC family amino acid-polyamine-organocation transporter 538 43.11 0 580815..581714 + 299 157691336 yeaB BPUM_0544 - CDF family cation diffusion facilitator 539 45.28 +1 581816..582778 + 320 157691337 yeaC BPUM_0545 - methanol dehydrogenase regulatory protein 540 44.50 0 582775..583965 + 396 157691338 yeaD BPUM_0546 - hypothetical protein 541 43.95 0 583975..586179 + 734 157691339 yebA BPUM_0547 - hypothetical protein 542 44.16 0 586366..587907 + 513 157691340 guaA BPUM_0548 - bifunctional GMP synthase/glutamine amidotransferase protein 543 28.42 -2 588295..589413 + 372 157691341 yopK BPUM_0549 - spore transcriptional regulator YopK 544 27.39 -2 589733..590119 - 128 157691342 - BPUM_0550 - transcriptional regulator 545 35.80 -1 590560..590802 + 80 157691343 - BPUM_0552 - hypothetical protein 546 26.60 -2 592152..593117 + 321 157691344 - BPUM_0553 - hypothetical protein 547 34.76 -1 593151..594485 + 444 157691345 ydcQ BPUM_0554 - FtsK/SpoIIIE family protein 548 33.97 -1 594559..595659 + 366 157691346 ydcR BPUM_0555 - transcriptional regulator 549 35.27 -1 595915..596172 + 85 157691347 - BPUM_0556 - hypothetical protein 550 32.97 -2 596179..596457 + 92 157691348 yddA BPUM_0557 - hypothetical protein 551 37.17 -1 596536..597186 + 216 157691349 - BPUM_0558 - hypothetical protein 552 37.74 0 597247..599790 + 847 157691350 - BPUM_0559 - hypothetical protein 553 26.06 -2 600179..601003 - 274 157691351 - BPUM_0560 - hypothetical protein 554 42.24 0 601232..602017 + 261 157691352 ydiP BPUM_0561 - DNA (cytosine-5-)-methyltransferase 555 35.69 -1 602089..602385 + 98 157691353 - BPUM_0562 - hypothetical protein 556 39.01 0 602375..602656 + 93 157691354 - BPUM_0563 - hypothetical protein 557 34.86 -1 602685..603077 + 130 157691355 - BPUM_0564 - hypothetical protein 558 36.91 -1 603074..604303 + 409 157691356 - BPUM_0565 - type II/IV secretion system protein 559 33.21 -2 604290..605102 + 270 157691357 - BPUM_0566 - hypothetical protein 560 36.35 -1 605107..605868 + 253 157691358 - BPUM_0567 - hypothetical protein 561 33.33 -2 605875..606234 + 119 157691359 - BPUM_0568 - hypothetical protein 562 40.48 0 606407..606574 + 55 157691360 - BPUM_0569 - hypothetical protein 563 32.93 -2 606833..607081 + 82 157691361 - BPUM_0570 - hypothetical protein 564 34.44 -1 607062..608057 + 331 157691362 yddB BPUM_0571 - hypothetical protein 565 39.08 0 608069..608329 + 86 157691363 yddC BPUM_0572 - hypothetical protein 566 31.84 -2 608341..608808 + 155 157691364 yddD BPUM_0573 - hypothetical protein 567 36.22 -1 608786..611242 + 818 157691365 yddE BPUM_0574 - hypothetical protein 568 36.48 -1 612013..614394 + 793 157691366 yddG BPUM_0575 - hypothetical protein 569 40.18 0 614391..615368 + 325 157691367 yddH BPUM_0576 - C40 family peptidase 570 35.16 -1 615378..615869 + 163 157691368 yddI BPUM_0577 - hypothetical protein 571 35.24 -1 615897..616106 + 69 157691369 - BPUM_0578 - hypothetical protein 572 34.27 -1 616312..617589 + 425 157691370 int BPUM_0580 - integrase 573 31.07 -2 617863..618921 - 352 157691371 - BPUM_0581 - AraC family transcription regulator 574 38.51 0 618922..620583 - 553 157691372 - BPUM_0582 - 2-isopropylmalate synthase 575 38.74 0 621147..622034 - 295 157691373 ybfP BPUM_0583 - AraC family transcription regulator 576 34.59 -1 622244..623116 + 290 157691374 ydeE BPUM_0584 - transcriptional regulator 577 38.19 0 623130..623705 + 191 157691375 - BPUM_0585 - acetyltransferase 578 39.86 0 623842..624408 - 188 157691376 - BPUM_0586 - acetyltransferase 579 41.40 0 624413..624598 - 61 157691377 - BPUM_0587 - hypothetical protein 580 36.45 -1 624778..625323 + 181 157691378 - BPUM_0588 - ECF family DNA-directed RNA polymerase sigma factor 581 36.99 -1 625292..626740 + 482 157691379 - BPUM_0589 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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