version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 391 41.75 0 436591..436887 - 98 157691189 ydzA BPUM_0396 - hypothetical protein 392 43.11 0 437024..437698 - 224 157691190 ydhC BPUM_0397 - GntR family transcriptional regulator 393 42.55 0 437736..438017 + 93 157691191 - BPUM_0398 - hypothetical protein 394 45.17 +1 438114..439169 + 351 157691192 ycsA BPUM_0399 - tartrate dehydrogenase 395 43.85 0 439242..441428 + 728 157691193 topB BPUM_0400 - DNA topoisomerase III 396 37.30 -1 441626..442708 + 360 157691194 ydaJ BPUM_0401 - hypothetical protein 397 41.08 0 442689..443540 + 283 157691195 ydaK BPUM_0402 - hypothetical protein 398 42.13 0 443530..445245 + 571 157691196 ydaL BPUM_0403 - hypothetical protein 399 42.71 0 445238..446506 + 422 157691197 ydaM BPUM_0404 - glycosyltransferase 400 39.86 0 446529..448598 + 689 157691198 ydaN BPUM_0405 - hypothetical protein 401 41.16 0 448926..450752 + 608 157691199 ydaO BPUM_0406 - APC family amino acid-polyamine-organocation transporter 402 43.26 0 450823..452544 + 573 157691200 ydaP BPUM_0407 - pyruvate oxidase 403 41.57 0 452781..454334 + 517 157691201 yqcG BPUM_0408 - hypothetical protein 404 28.54 -2 454339..454818 + 159 157691202 - BPUM_0409 - hypothetical protein 405 41.78 0 455086..455310 + 74 157691203 - BPUM_0410 - hypothetical protein 406 39.77 0 455351..455614 - 87 157691204 - BPUM_0411 - hypothetical protein 407 45.26 +1 455713..456282 - 189 157691205 ydaF BPUM_0412 - acetyltransferase 408 44.52 0 456353..457630 - 425 157691206 mntH BPUM_0413 - manganese transport protein MntH 409 48.28 +1 457853..458113 - 86 157691207 ydaS BPUM_0414 - hypothetical protein 410 42.24 0 458270..459100 + 276 157691208 ydbA BPUM_0415 - ABC transporter ATP-binding protein 411 40.16 0 459306..460403 - 365 157691209 dctB BPUM_0416 - TRAP-T family tripartite ATP-independent periplasmic binding protein 412 44.33 0 460627..462090 + 487 157691210 dctS BPUM_0417 - histidine kinase 413 43.42 0 462087..462770 + 227 157691211 dctR BPUM_0418 - response regulator 414 44.60 0 462895..464163 + 422 157691212 dctP BPUM_0419 - C4-dicarboxylate transporter DctA 415 38.32 0 464373..465395 + 340 157691213 ydbI BPUM_0420 - hypothetical protein 416 42.19 0 465671..466912 + 413 157691214 - BPUM_0421 - DAACS family dicarboxylate/amino acid:cation symporter 417 42.93 0 467049..467975 + 308 157691215 ydbJ BPUM_0422 - ABC transporter ATP-binding protein 418 39.32 0 467953..468720 + 255 157691216 - BPUM_0423 - ABC transporter ATP-binding protein 419 37.50 0 468838..469173 + 111 157691217 ydbL BPUM_0424 - hypothetical protein 420 38.00 0 469273..469422 - 49 157691218 ydbN BPUM_0425 - hypothetical protein 421 36.76 -1 469769..470089 - 106 157691219 ydbP BPUM_0426 - thioredoxin family protein 422 41.46 0 470273..471355 + 360 157691220 ddl BPUM_0427 - D-alanyl-alanine synthetase A 423 41.76 0 471437..472801 + 454 157691221 murF BPUM_0428 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase 424 41.99 0 472829..473521 + 230 157691222 - BPUM_0429 - carboxylesterase 425 42.48 0 473649..473987 + 112 157691223 - BPUM_0430 - hypothetical protein 426 42.74 0 474102..475643 + 513 157691224 ydbR BPUM_0431 - ATP-dependent RNA helicase 427 43.33 0 475754..476233 + 159 157691225 ydbS BPUM_0432 - hypothetical protein 428 40.53 0 476223..477722 + 499 157691226 ydbT BPUM_0433 - hypothetical protein 429 42.41 0 477779..478384 - 201 157691227 ydcA BPUM_0434 - serine peptidase 430 41.80 0 478479..478844 + 121 157691228 acpS BPUM_0435 - 4'-phosphopantetheinyl transferase 431 41.96 0 479014..480021 + 335 157691229 ydcC BPUM_0436 - sporulation protein YdcC 432 45.04 +1 480363..481541 + 392 157691230 alr BPUM_0437 - alanine racemase 433 42.55 0 481838..482119 + 93 157691231 ydcD BPUM_0438 - hypothetical protein 434 40.74 0 482124..482474 + 116 157691232 ydcE BPUM_0439 - PemK family growth inhibitor 435 39.47 0 482589..483419 + 276 157691233 rsbR BPUM_0440 - anti-anti-sigma-B regulator 436 39.57 0 483424..483792 + 122 157691234 rsbS BPUM_0441 - RsbT antagonist 437 44.78 +1 483795..484196 + 133 157691235 rsbT BPUM_0442 - non-specific serine/threonine protein kinase 438 41.07 0 484207..485214 + 335 157691236 rsbU BPUM_0443 - phosphoserine phosphatase 439 39.70 0 485274..485603 + 109 157691237 rsbV BPUM_0444 - anti-anti-sigma factor (RsbW antagonist) 440 43.56 0 485600..486088 + 162 157691238 rsbW BPUM_0445 - serine-protein kinase RsbW 441 42.21 0 486054..486842 + 262 157691239 sigB BPUM_0446 - RNA polymerase sigma factor SigB 442 39.50 0 486842..487441 + 199 157691240 rsbX BPUM_0447 - phosphoserine phosphatase 443 45.09 +1 487518..489677 + 719 157691241 ydcI BPUM_0448 - RNA binding transcriptional accessory protein 444 38.52 0 489698..489832 - 44 157691242 - BPUM_0449 - hypothetical protein 445 43.04 0 489932..490405 + 157 157691243 ydcK BPUM_0450 - hypothetical protein 446 42.84 0 490599..491576 + 325 157691244 acoA BPUM_0451 - dihydrolipoyl dehydrogenase E1 alpha subunit 447 45.47 +1 491597..492634 + 345 157691245 acoB BPUM_0452 - dihydrolipoyl dehydrogenase E1 beta subunit 448 44.12 0 492652..493791 + 379 157691246 acoC BPUM_0453 - branched-chain alpha-keto acid dehydrogenase subunit E2 449 45.58 +1 493810..495189 + 459 157691247 acoL BPUM_0454 - dihydrolipoamide dehydrogenase 450 43.34 0 495298..497145 + 615 157691248 acoR BPUM_0455 - transcriptional regulator 451 35.19 -1 498006..498167 + 53 157691249 - BPUM_0456 - hypothetical protein 452 41.51 0 498191..498985 + 264 157691250 - BPUM_0457 - alpha/beta fold family hydrolase 453 35.70 -1 499198..499704 + 168 157691251 grpB BPUM_0458 - glutamate rich protein 454 39.71 0 499990..500193 + 67 157691252 cspC BPUM_0459 - cold-shock protein 455 35.50 -1 500484..500945 - 153 157691253 ydeB BPUM_0460 - transcription regulator CarD 456 45.33 +1 501186..502235 - 349 157691254 adhA BPUM_0461 - NADP-dependent alcohol dehydrogenase 457 38.56 0 502459..502860 + 133 157691255 yraB BPUM_0462 - MerR family transcriptional regulator 458 42.49 0 502903..503634 - 243 157691256 bglS BPUM_0463 - licheninase 459 39.72 0 503940..504518 + 192 157691257 - BPUM_0464 - TetR family transcriptional regulator 460 41.94 0 504591..506030 + 479 157691258 lmrB BPUM_0465 - major facilitator transporter 461 46.09 +1 506225..507118 + 297 157691259 - BPUM_0466 - carboxylesterase A 462 38.52 0 507260..507625 + 121 157691260 - BPUM_0467 - hypothetical protein 463 40.55 0 507730..508491 + 253 157691261 dltE BPUM_0468 - short-chain dehydrogenase/reductase SDR 464 36.31 -1 508641..509009 - 122 157691262 - BPUM_0469 - hypothetical protein 465 41.08 0 509287..510435 + 382 157691263 yccC BPUM_0470 - asparaginase 466 42.00 0 510469..511368 - 299 157691264 - BPUM_0471 - peptidase 467 36.24 -1 511425..511871 - 148 157691265 - BPUM_0472 - MarR family transcriptional regulator 468 33.33 -2 511957..512106 + 49 157691266 - BPUM_0473 - hypothetical protein 469 39.93 0 512081..512686 + 201 157691267 - BPUM_0474 - TetR family transcriptional regulator 470 43.02 0 512718..513914 + 398 157691268 blt BPUM_0475 - major facilitator transporter 471 38.61 0 514149..514565 - 138 157691269 - BPUM_0476 - hypothetical protein 472 40.14 0 514562..515002 - 146 157691270 - BPUM_0477 - hypothetical protein 473 43.99 0 515144..515950 + 268 157691271 ydfB BPUM_0478 - hypothetical protein 474 44.37 0 515945..516415 - 156 157691272 - BPUM_0479 - GNAT family acetyltransferase 475 41.48 0 516468..516737 + 89 157691273 - BPUM_0480 - hypothetical protein 476 45.00 +1 516734..517273 - 179 157691274 - BPUM_0481 - acetyltransferase 477 42.17 0 517270..517665 - 131 157691275 - BPUM_0482 - dioxygenase 478 41.67 0 517734..518357 - 207 157691276 - BPUM_0483 - histone acetyltransferase HPA2-like protein 479 39.13 0 518507..519058 + 183 157691277 - BPUM_0484 - transcriptional regulator 480 41.07 0 519148..519690 + 180 157691278 - BPUM_0485 - dihydrofolate reductase family protein 481 37.97 0 519799..520272 + 157 157691279 - BPUM_0486 - transcriptional regulator 482 41.70 0 520223..520879 + 218 157691280 - BPUM_0487 - nitroreductase family protein 483 45.11 +1 520897..521949 + 350 157691281 - BPUM_0488 - hypothetical protein 484 39.13 0 521997..522203 - 68 157691282 - BPUM_0489 - hypothetical protein 485 38.05 0 522253..522591 + 112 157691283 - BPUM_0490 - hypothetical protein 486 40.90 0 522633..523187 - 184 157691284 - BPUM_0491 - transcriptional regulator 487 39.12 0 523299..523886 + 195 157691285 - BPUM_0492 - homoserine/threonine resistance transporter 488 43.66 0 523891..524442 - 183 157691286 - BPUM_0493 - acetyltransferase 489 35.05 -1 524565..525554 - 329 157691287 - BPUM_0494 - LysR family transcriptional regulator 490 41.32 0 525608..526396 + 262 157691288 - BPUM_0495 - aldo/keto dehydrogenase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0