version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3577 40.09 0 3598319..3598969 + 216 157694375 ydgC BPUM_3633 - TetR family transcriptional regulator 3578 41.49 0 3599030..3600292 + 420 157694376 - BPUM_3634 - major facilitator superfamily macrolide:cation symporter (or antiporter or uniporter) 3579 38.79 0 3600289..3602616 + 775 157694377 - BPUM_3635 - ABC transporter ATP-binding protein 3580 38.52 0 3602621..3603391 + 256 157694378 - BPUM_3636 - ABC transporter ATP-binding protein 3581 32.39 -2 3603423..3603635 - 70 157694379 - BPUM_3637 - hypothetical protein 3582 22.05 -2 3604335..3604529 + 64 157694380 - BPUM_3638 - hypothetical protein 3583 29.17 -2 3604540..3605283 + 247 157694381 - BPUM_3639 - hypothetical protein 3584 35.45 -1 3605471..3605659 - 62 157694382 - BPUM_3640 - hypothetical protein 3585 35.79 -1 3606160..3607338 + 392 157694383 rapK BPUM_3641 - aspartate phosphatase response regulator K 3586 34.98 -1 3607438..3608286 - 282 157694384 licT2 BPUM_3642 - transcription antiterminator 3587 39.47 0 3608317..3609783 - 488 157694385 - BPUM_3643 - beta-glucosidase 3588 42.10 0 3609788..3611647 - 619 157694386 - BPUM_3644 - PTS family beta-glucoside (glc) porter component IIBCA 3589 36.44 -1 3611995..3612960 - 321 157694387 - BPUM_3645 - hypothetical protein 3590 37.47 0 3612989..3613882 - 297 157694388 - BPUM_3646 - hypothetical protein 3591 38.77 0 3614062..3614613 + 183 157694389 - BPUM_3647 - transcriptional regulator 3592 43.48 0 3614618..3615100 + 160 157694390 - BPUM_3648 - hypothetical protein 3593 42.15 0 3615112..3615735 - 207 157694391 - BPUM_3649 - nucleoside diphosphate hydrolase 3594 41.06 0 3615906..3616112 + 68 157694392 - BPUM_3650 - transcriptional regulator 3595 39.35 0 3616109..3616789 + 226 157694393 - BPUM_3651 - hypothetical protein 3596 42.61 0 3616838..3618184 - 448 157694394 aapA BPUM_3652 - APC family amino acid-polyamine-organocation transporter 3597 43.01 0 3618691..3619713 + 340 157694395 degA BPUM_3653 - LacI family transcriptional regulator 3598 26.94 -2 3619710..3620006 + 98 157694396 - BPUM_3654 - hypothetical protein 3599 41.62 0 3620158..3621339 + 393 157694397 yfkL1 BPUM_3655 - major facilitator transporter 3600 41.31 0 3621358..3622260 + 300 157694398 - BPUM_3656 - shikimate dehydrogenase 3601 44.72 0 3622489..3623682 - 397 157694399 yfkL2 BPUM_3657 - major facilitator transporter 3602 34.63 -1 3624015..3624629 - 204 157694400 - BPUM_3658 - hypothetical protein 3603 40.45 0 3625067..3626302 - 411 157694401 - BPUM_3659 - tellurium resistance protein 3604 28.40 -2 3626464..3626625 + 53 157694402 - BPUM_3660 - hypothetical protein 3605 40.16 0 3626630..3627610 - 326 157694403 - BPUM_3661 - hypothetical protein 3606 43.49 0 3627766..3629202 - 478 157694404 bglA BPUM_3662 - 6-phospho-beta-glucosidase 3607 40.65 0 3629391..3630101 + 236 157694405 yydK BPUM_3663 - transcriptional regulator 3608 33.23 -2 3630151..3631161 - 336 157694406 - BPUM_3664 - hypothetical protein 3609 39.06 0 3631243..3633354 - 703 157694407 - BPUM_3665 - hypothetical protein 3610 46.04 +1 3633667..3634563 + 298 157694408 - BPUM_3666 - phenazine biosynthesis protein 3611 43.41 0 3634607..3635479 - 290 157694409 yvbU BPUM_3667 - LysR family transcriptional regulator 3612 41.57 0 3635485..3635994 - 169 157694410 yxjI BPUM_3668 - hypothetical protein 3613 35.37 -1 3636100..3636345 - 81 157694411 - BPUM_3669 - hypothetical protein 3614 42.86 0 3636512..3637057 - 181 157694412 - BPUM_3670 - hypothetical protein 3615 37.08 -1 3637140..3637406 + 88 157694413 - BPUM_3671 - hypothetical protein 3616 34.48 -1 3637403..3637663 + 86 157694414 - BPUM_3672 - hypothetical protein 3617 41.22 0 3637721..3638569 - 282 157694415 - BPUM_3673 - Zn-dependent hydrolase 3618 25.00 -2 3638676..3641123 - 815 157694416 - BPUM_3674 - DNA helicase 3619 28.08 -2 3641133..3641894 - 253 157694417 - BPUM_3675 - hypothetical protein 3620 44.17 0 3642589..3643068 - 159 157694418 yydA BPUM_3676 - SPOUT methyltransferase superfamily protein 3621 43.92 0 3643481..3644311 - 276 157694419 cbiQ BPUM_3677 - cobalt ABC transporter 3622 44.93 +1 3644302..3646017 - 571 157694420 ykoD BPUM_3678 - cobalt ABC transporter ATP-binding protein 3623 46.06 +1 3646037..3646594 - 185 157694421 - BPUM_3679 - hypothetical protein 3624 44.60 0 3646609..3647469 - 286 157694422 - BPUM_3680 - hypothetical protein 3625 36.09 -1 3648043..3648732 + 229 157694423 - BPUM_3681 - hypothetical protein 3626 44.33 0 3648733..3649614 + 293 157694424 - BPUM_3682 - multidrug ABC transporter ATP-binding protein 3627 43.76 0 3649654..3650190 - 178 157694425 yycN BPUM_3683 - GNAT family acetyltransferase 3628 47.64 +1 3650187..3651374 - 395 157694426 yyxA BPUM_3684 - peptidase 3629 46.16 +1 3651456..3652250 - 264 157694427 yycJ BPUM_3685 - metallo-beta-lactamase family protein 3630 41.78 0 3652257..3653120 - 287 157694428 yycI BPUM_3686 - hypothetical protein 3631 43.99 0 3653107..3654495 - 462 157694429 yycH BPUM_3687 - hypothetical protein 3632 43.07 0 3654476..3656314 - 612 157694430 yycG BPUM_3688 - sensor histidine kinase 3633 43.79 0 3656322..3657029 - 235 157694431 yycF BPUM_3689 - response regulator 3634 41.14 0 3658119..3658643 + 174 157694432 - BPUM_3690 - peroxiredoxin 3635 40.95 0 3658874..3659083 - 69 157694433 - BPUM_3691 - hypothetical protein 3636 44.44 0 3659099..3660232 - 377 157694434 - BPUM_3692 - hypothetical protein 3637 43.95 0 3660369..3661658 - 429 157694435 purA BPUM_3693 - adenylosuccinate synthetase 3638 41.50 0 3661875..3662486 - 203 157694436 - BPUM_3694 - TetR family transcriptional regulator 3639 45.11 +1 3662593..3663798 + 401 157694437 - BPUM_3695 - cytochrome P450 3640 46.62 +1 3663829..3664242 - 137 157694438 yycE BPUM_3696 - hypothetical protein 3641 44.84 +1 3664372..3665736 - 454 157694439 dnaC BPUM_3697 - replicative DNA helicase 3642 35.20 -1 3665947..3666912 - 321 157694440 ybdO BPUM_3698 - hypothetical protein 3643 36.13 -1 3667022..3667879 + 285 157694441 ybdN BPUM_3699 - hypothetical protein 3644 41.13 0 3668226..3669842 + 538 157694442 ybbB BPUM_3700 - AraC family transcription regulator 3645 39.40 0 3669941..3670912 + 323 157694443 feuA BPUM_3701 - iron-binding ABC transporter ATP-binding protein 3646 45.77 +1 3670959..3671690 + 243 157694444 ybbA BPUM_3702 - esterase 3647 40.35 0 3671757..3671927 + 56 157694445 yycC BPUM_3703 - hypothetical protein 3648 46.90 +1 3671949..3673157 + 402 157694446 - BPUM_3704 - major facilitator transporter 3649 42.00 0 3673203..3673652 - 149 157694447 rplI BPUM_3705 - 50S ribosomal protein L9 3650 43.34 0 3673649..3675637 - 662 157694448 yybT BPUM_3706 - DHH family phosphoesterase 3651 41.27 0 3675659..3676615 - 318 157694449 yybS BPUM_3707 - hypothetical protein 3652 40.99 0 3676900..3677826 + 308 157694450 ppaC BPUM_3708 - putative manganese-dependent inorganic pyrophosphatase 3653 38.34 0 3677874..3678731 - 285 157694451 yrhM BPUM_3709 - anti-SigV factor 3654 38.59 0 3678732..3679226 - 164 157694452 sigV BPUM_3710 - ECF family DNA-directed RNA polymerase sigma subunit SigV 3655 42.47 0 3679375..3680031 - 218 157694453 - BPUM_3711 - hypothetical protein 3656 45.77 +1 3680119..3681726 + 535 157694454 katX1 BPUM_3712 - catalase KatX1 3657 44.39 0 3681775..3682398 - 207 157694455 - BPUM_3713 - trp repressor binding protein 3658 45.32 +1 3682462..3683070 - 202 157694456 - BPUM_3714 - phospholipase/carboxylesterase family protein 3659 43.61 0 3683067..3684059 - 330 157694457 - BPUM_3715 - lactoylglutathione lyase 3660 42.69 0 3684229..3685746 - 505 157694458 - BPUM_3716 - glycine betaine/L-proline ABC transporter binding protein 3661 44.93 +1 3685739..3686704 - 321 157694459 - BPUM_3717 - glycine betaine/L-proline ABC transporter ATP-binding protein 3662 40.42 0 3686906..3687145 - 79 157694460 rpsR BPUM_3718 - 30S ribosomal protein S18 3663 45.42 +1 3687189..3687734 - 181 157694461 ssb BPUM_3719 - single-strand DNA-binding protein 3664 41.32 0 3687771..3688058 - 95 157694462 rpsF BPUM_3720 - 30S ribosomal protein S6 3665 42.51 0 3688167..3689267 - 366 157694463 yyaF BPUM_3721 - translation-associated GTPase 3666 44.44 0 3689484..3689690 - 68 157694464 - BPUM_3722 - hypothetical protein 3667 40.55 0 3689952..3691295 + 447 157694465 - BPUM_3723 - hypothetical protein 3668 43.31 0 3691311..3691721 + 136 157694466 - BPUM_3724 - hypothetical protein 3669 40.51 0 3691747..3692805 - 352 157694467 yyaD BPUM_3725 - hypothetical protein 3670 39.85 0 3692827..3693501 + 224 157694468 yyaC BPUM_3726 - hypothetical protein 3671 40.77 0 3693527..3694387 - 286 157694469 spo0J BPUM_3727 - stage 0 DNA-binding protein 3672 42.20 0 3694374..3695174 - 266 157694470 soj BPUM_3728 - chromosome partitioning protein transcriptional regulator 3673 40.73 0 3695369..3696193 - 274 157694471 - BPUM_3729 - hypothetical protein 3674 42.01 0 3696312..3697187 - 291 157694472 spoOJ BPUM_3730 - stage 0 DNA-binding protein 3675 39.03 0 3697293..3698012 - 239 157694473 gidB BPUM_3731 - glucose-inhibited division protein B 3676 41.18 0 3698026..3699912 - 628 157694474 gidA2 BPUM_3732 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0