version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3515 41.50 0 3535645..3536379 - 244 157694313 ykoC BPUM_3571 - cobalt ABC transporter 3516 42.71 0 3536369..3537967 - 532 157694314 - BPUM_3572 - ABC transporter ATP-binding protein 3517 45.33 +1 3537942..3538541 - 199 157694315 ykoE BPUM_3573 - ABC transporter ATP-binding protein 3518 44.54 0 3538538..3539224 - 228 157694316 - BPUM_3574 - thiaminase 3519 40.25 0 3539472..3540599 - 375 157694317 - BPUM_3575 - hypothetical protein 3520 40.64 0 3540741..3541397 - 218 157694318 yraA BPUM_3576 - C56 family peptidase 3521 37.58 0 3541652..3541816 + 54 157694319 - BPUM_3577 - hypothetical protein 3522 39.25 0 3541851..3542222 - 123 157694320 - BPUM_3578 - hypothetical protein 3523 35.69 -1 3542228..3542482 - 84 157694321 - BPUM_3579 - hypothetical protein 3524 42.40 0 3542690..3545071 - 793 157694322 - BPUM_3580 - M6 family metalloendopeptidase 3525 41.16 0 3545261..3545554 - 97 157694323 ycnE BPUM_3581 - hypothetical protein 3526 40.85 0 3545580..3546218 - 212 157694324 ydgI BPUM_3582 - NAD(P)H nitroreductase 3527 41.22 0 3546233..3546676 - 147 157694325 ydgJ BPUM_3583 - MarR family transcriptional regulator 3528 33.97 -1 3546704..3546859 + 51 157694326 - BPUM_3584 - hypothetical protein 3529 44.47 0 3546884..3548185 - 433 157694327 pdp BPUM_3585 - pyrimidine-nucleoside phosphorylase 3530 41.12 0 3548211..3549392 - 393 157694328 nupC BPUM_3586 - CNT family concentrative nucleoside transporter 3531 44.94 +1 3549559..3550230 - 223 157694329 deoC BPUM_3587 - deoxyribose-phosphate aldolase 3532 45.29 +1 3550314..3551258 - 314 157694330 deoR BPUM_3588 - DeoR family transcriptional regulator 3533 41.84 0 3551319..3552329 - 336 157694331 - BPUM_3589 - aldose 1-epimerase 3534 43.59 0 3552436..3554259 + 607 157694332 yrhL BPUM_3590 - acyltransferase 3535 41.59 0 3554398..3555669 - 423 157694333 ydeG BPUM_3591 - major facilitator transporter 3536 45.90 +1 3555914..3557011 - 365 157694334 - BPUM_3592 - hypothetical protein 3537 46.47 +1 3557008..3557715 - 235 157694335 - BPUM_3593 - SAM-dependent methyltransferase 3538 45.93 +1 3557845..3558852 + 335 157694336 - BPUM_3594 - LuxR family transcriptional regulator 3539 41.94 0 3559094..3559906 - 270 157694337 yxeH BPUM_3595 - HAD family hydrolase 3540 35.28 -1 3560216..3560575 + 119 157694338 yyaN BPUM_3596 - transcriptional regulator 3541 40.61 0 3560685..3561701 + 338 157694339 - BPUM_3597 - dehydrogenase 3542 42.18 0 3561744..3563258 - 504 157694340 - BPUM_3598 - sensor histidine kinase 3543 40.96 0 3563578..3564915 + 445 157694341 - BPUM_3599 - amino acid APC transporter 3544 43.90 0 3564949..3566055 - 368 157694342 yhaZ BPUM_3600 - DNA alkylation repair protein 3545 44.85 +1 3566146..3567474 - 442 157694343 - BPUM_3601 - GntP family gluconate:proton (H+) symporter 3546 45.05 +1 3567499..3569043 - 514 157694344 gntK BPUM_3602 - gluconokinase 3547 40.91 0 3569228..3570085 - 285 157694345 ybbH BPUM_3603 - transcriptional regulator 3548 45.09 +1 3570177..3571112 - 311 157694346 - BPUM_3604 - purine nucleosidase 3549 31.06 -2 3571207..3571689 - 160 157694347 - BPUM_3605 - hypothetical protein 3550 33.13 -2 3571772..3572254 - 160 157694348 - BPUM_3606 - hypothetical protein 3551 34.74 -1 3572338..3572835 - 165 157694349 - BPUM_3607 - hypothetical protein 3552 40.38 0 3572960..3574450 + 496 157694350 - BPUM_3608 - hypothetical protein 3553 40.88 0 3574463..3574873 + 136 157694351 - BPUM_3609 - hypothetical protein 3554 43.05 0 3574956..3576632 + 558 157694352 - BPUM_3610 - hypothetical protein 3555 43.00 0 3576648..3577547 - 299 157694353 ywfK BPUM_3611 - LysR family transcriptional regulator 3556 41.16 0 3577720..3578715 + 331 157694354 lacR BPUM_3612 - LacI family transcriptional regulator LacR 3557 42.42 0 3578886..3580151 + 421 157694355 cycB BPUM_3613 - cyclodextrin ABC transporter binding protein 3558 42.62 0 3580290..3581528 + 412 157694356 yvfL BPUM_3614 - cyclodextrin ABC transporter membrane protein 3559 42.47 0 3581530..3582372 + 280 157694357 yvfM BPUM_3615 - cyclodextrin ABC transporter membrane protein 3560 45.00 +1 3582384..3583592 + 402 157694358 yvfO BPUM_3616 - arabinogalactan endo-1,4-beta-galactosidase 3561 46.30 +1 3583616..3585682 + 688 157694359 lacA BPUM_3617 - beta-galactosidase 3562 43.34 0 3585981..3587309 + 442 157694360 - BPUM_3618 - CitMHS family citrate-divalent cation:proton (H+) symporter 3563 38.46 0 3587351..3587779 - 142 157694361 - BPUM_3619 - hypothetical protein 3564 37.63 0 3587807..3588760 - 317 157694362 yhcI BPUM_3620 - ABC transporter ATP-binding protein 3565 42.15 0 3588757..3589686 - 309 157694363 yhcH BPUM_3621 - ABC transporter ATP-binding protein 3566 22.91 -2 3589877..3590797 - 306 157694364 - BPUM_3622 - ABC transporter ATP-binding protein 3567 29.08 -2 3590800..3591693 - 297 157694365 - BPUM_3623 - ABC transporter ATP-binding protein 3568 25.64 -2 3591686..3592036 - 116 157694366 - BPUM_3624 - response regulator 3569 26.82 -2 3592046..3592567 - 173 157694367 - BPUM_3625 - hypothetical protein 3570 22.86 -2 3592570..3593094 - 174 157694368 - BPUM_3626 - hypothetical protein 3571 32.43 -2 3593113..3593334 - 73 157694369 - BPUM_3627 - hypothetical protein 3572 35.09 -1 3593574..3593858 + 94 157694370 - BPUM_3628 - hypothetical protein 3573 38.94 0 3594054..3594392 - 112 157694371 phnA BPUM_3629 - alkylphosphonate uptake protein 3574 46.49 +1 3594485..3595624 - 379 157694372 glxK BPUM_3630 - glycerate kinase 3575 46.00 +1 3595656..3596942 - 428 157694373 yojA BPUM_3631 - GntP family gluconate:proton (H+) symporter 3576 42.59 0 3597045..3598157 - 370 157694374 ysfB BPUM_3632 - sugar diacid utilization regulator 3577 40.09 0 3598319..3598969 + 216 157694375 ydgC BPUM_3633 - TetR family transcriptional regulator 3578 41.49 0 3599030..3600292 + 420 157694376 - BPUM_3634 - major facilitator superfamily macrolide:cation symporter (or antiporter or uniporter) 3579 38.79 0 3600289..3602616 + 775 157694377 - BPUM_3635 - ABC transporter ATP-binding protein 3580 38.52 0 3602621..3603391 + 256 157694378 - BPUM_3636 - ABC transporter ATP-binding protein 3581 32.39 -2 3603423..3603635 - 70 157694379 - BPUM_3637 - hypothetical protein 3582 22.05 -2 3604335..3604529 + 64 157694380 - BPUM_3638 - hypothetical protein 3583 29.17 -2 3604540..3605283 + 247 157694381 - BPUM_3639 - hypothetical protein 3584 35.45 -1 3605471..3605659 - 62 157694382 - BPUM_3640 - hypothetical protein 3585 35.79 -1 3606160..3607338 + 392 157694383 rapK BPUM_3641 - aspartate phosphatase response regulator K 3586 34.98 -1 3607438..3608286 - 282 157694384 licT2 BPUM_3642 - transcription antiterminator 3587 39.47 0 3608317..3609783 - 488 157694385 - BPUM_3643 - beta-glucosidase 3588 42.10 0 3609788..3611647 - 619 157694386 - BPUM_3644 - PTS family beta-glucoside (glc) porter component IIBCA 3589 36.44 -1 3611995..3612960 - 321 157694387 - BPUM_3645 - hypothetical protein 3590 37.47 0 3612989..3613882 - 297 157694388 - BPUM_3646 - hypothetical protein 3591 38.77 0 3614062..3614613 + 183 157694389 - BPUM_3647 - transcriptional regulator 3592 43.48 0 3614618..3615100 + 160 157694390 - BPUM_3648 - hypothetical protein 3593 42.15 0 3615112..3615735 - 207 157694391 - BPUM_3649 - nucleoside diphosphate hydrolase 3594 41.06 0 3615906..3616112 + 68 157694392 - BPUM_3650 - transcriptional regulator 3595 39.35 0 3616109..3616789 + 226 157694393 - BPUM_3651 - hypothetical protein 3596 42.61 0 3616838..3618184 - 448 157694394 aapA BPUM_3652 - APC family amino acid-polyamine-organocation transporter 3597 43.01 0 3618691..3619713 + 340 157694395 degA BPUM_3653 - LacI family transcriptional regulator 3598 26.94 -2 3619710..3620006 + 98 157694396 - BPUM_3654 - hypothetical protein 3599 41.62 0 3620158..3621339 + 393 157694397 yfkL1 BPUM_3655 - major facilitator transporter 3600 41.31 0 3621358..3622260 + 300 157694398 - BPUM_3656 - shikimate dehydrogenase 3601 44.72 0 3622489..3623682 - 397 157694399 yfkL2 BPUM_3657 - major facilitator transporter 3602 34.63 -1 3624015..3624629 - 204 157694400 - BPUM_3658 - hypothetical protein 3603 40.45 0 3625067..3626302 - 411 157694401 - BPUM_3659 - tellurium resistance protein 3604 28.40 -2 3626464..3626625 + 53 157694402 - BPUM_3660 - hypothetical protein 3605 40.16 0 3626630..3627610 - 326 157694403 - BPUM_3661 - hypothetical protein 3606 43.49 0 3627766..3629202 - 478 157694404 bglA BPUM_3662 - 6-phospho-beta-glucosidase 3607 40.65 0 3629391..3630101 + 236 157694405 yydK BPUM_3663 - transcriptional regulator 3608 33.23 -2 3630151..3631161 - 336 157694406 - BPUM_3664 - hypothetical protein 3609 39.06 0 3631243..3633354 - 703 157694407 - BPUM_3665 - hypothetical protein 3610 46.04 +1 3633667..3634563 + 298 157694408 - BPUM_3666 - phenazine biosynthesis protein 3611 43.41 0 3634607..3635479 - 290 157694409 yvbU BPUM_3667 - LysR family transcriptional regulator 3612 41.57 0 3635485..3635994 - 169 157694410 yxjI BPUM_3668 - hypothetical protein 3613 35.37 -1 3636100..3636345 - 81 157694411 - BPUM_3669 - hypothetical protein 3614 42.86 0 3636512..3637057 - 181 157694412 - BPUM_3670 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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