version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3453 46.00 +1 3467651..3469000 - 449 157694251 licC BPUM_3505 - PTS family oligomeric beta-glucoside porter component IIC 3454 38.89 0 3469015..3469320 - 101 157694252 licB BPUM_3506 - PTS family oligomeric beta-glucoside porter component IIB 3455 43.86 0 3469440..3471386 - 648 157694253 - BPUM_3507 - transcription antiterminator BglG 3456 41.14 0 3471624..3472238 - 204 157694254 - BPUM_3508 - C60 family sortase A 3457 41.94 0 3472308..3473690 - 460 157694255 - BPUM_3509 - hypothetical protein 3458 35.96 -1 3473816..3473929 - 37 157694256 yxzF BPUM_3510 - hypothetical protein 3459 44.35 0 3474013..3475383 - 456 157694257 gdhA BPUM_3511 - glutamate dehydrogenase 3460 40.85 0 3475698..3475910 - 70 157694258 yxlD BPUM_3512 - hypothetical protein 3461 41.99 0 3475907..3476218 - 103 157694259 yxlC BPUM_3513 - hypothetical protein 3462 41.62 0 3476218..3476748 - 176 157694260 sigY BPUM_3514 - RNA polymerase sigma factor SigY 3463 40.43 0 3477232..3478260 + 342 157694261 pelB BPUM_3515 - pectate lyase 3464 45.21 +1 3478318..3480051 - 577 157694262 cydD BPUM_3516 - ABC transporter ATP-binding protein 3465 44.67 0 3480041..3481777 - 578 157694263 cydC BPUM_3517 - ABC transporter ATP-binding protein 3466 45.43 +1 3481777..3482793 - 338 157694264 cydB BPUM_3518 - cytochrome bd ubiquinol oxidase subunit II 3467 41.95 0 3482780..3484195 - 471 157694265 cydA BPUM_3519 - cytochrome bd ubiquinol oxidase subunit I 3468 43.94 0 3484527..3485648 - 373 157694266 - BPUM_3520 - iron ABC transporter ATP-binding protein 3469 49.70 +2 3485650..3486663 - 337 157694267 - BPUM_3521 - iron ABC transporter membrane protein 3470 45.58 +1 3486660..3487598 - 312 157694268 - BPUM_3522 - iron ABC transporter binding protein 3471 43.82 0 3487617..3488369 - 250 157694269 - BPUM_3523 - C60 family sortase B 3472 47.08 +1 3488396..3489166 - 256 157694270 - BPUM_3524 - iron ABC transporter ATP-binding protein 3473 46.50 +1 3489153..3490139 - 328 157694271 - BPUM_3525 - iron ABC transporter membrane protein 3474 45.05 +1 3490173..3491060 - 295 157694272 - BPUM_3526 - iron ABC transporter binding protein 3475 42.04 0 3494480..3494812 - 110 157694273 - BPUM_3529 - hypothetical protein 3476 43.62 0 3494988..3495881 + 297 157694274 - BPUM_3530 - glyoxalase family protein 3477 44.62 0 3495859..3496620 + 253 157694275 ribAB BPUM_3531 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 3478 46.06 +1 3496607..3497698 + 363 157694276 ribD1 BPUM_3532 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 3479 38.46 0 3498161..3498316 + 51 157694277 - BPUM_3534 - hypothetical protein 3480 44.83 +1 3498932..3499792 - 286 157694278 yxkH BPUM_3535 - polysaccharide deacetylase 3481 42.90 0 3499858..3500202 - 114 157694279 ptcA BPUM_3536 - PTS family cellobiose porter component IIA 3482 41.98 0 3500207..3500530 - 107 157694280 - BPUM_3537 - PTS family cellobiose porter component IIB 3483 43.38 0 3500543..3501976 - 477 157694281 - BPUM_3538 - beta-glucosidase 3484 43.55 0 3502546..3503856 - 436 157694282 - BPUM_3540 - PTS family porter component IIC 3485 42.27 0 3503946..3505904 - 652 157694283 - BPUM_3541 - transcriptional regulator 3486 42.28 0 3506011..3506256 + 81 157694284 - BPUM_3542 - hypothetical protein 3487 42.02 0 3506301..3506726 - 141 157694285 - BPUM_3543 - hypothetical protein 3488 40.15 0 3507009..3507272 - 87 157694286 ywqIA BPUM_3544 - hypothetical protein 3489 46.24 +1 3507310..3507735 - 141 157694287 - BPUM_3545 - hypothetical protein 3490 39.22 0 3508034..3509443 - 469 157694288 mleN BPUM_3546 - NhaC family H(+)/lactate-Na(+) antiporter 3491 42.83 0 3509587..3511008 - 473 157694289 ansB2 BPUM_3547 - aspartate ammonia-lyase 3492 40.30 0 3511037..3512026 - 329 157694290 ansA BPUM_3548 - asparaginase 3493 42.53 0 3512234..3512581 + 115 157694291 ansR BPUM_3549 - transcriptional regulator 3494 42.74 0 3512635..3513102 - 155 157694292 - BPUM_3550 - DNA-binding protein 3495 40.15 0 3513201..3513728 - 175 157694293 yfjD BPUM_3551 - hypothetical protein 3496 42.42 0 3513750..3514508 - 252 157694294 yfjC BPUM_3552 - hypothetical protein 3497 44.70 0 3514521..3515717 - 398 157694295 yfjB BPUM_3553 - hypothetical protein 3498 46.85 +1 3515722..3516054 - 110 157694296 yfjA BPUM_3554 - hypothetical protein 3499 41.77 0 3516272..3517504 + 410 157694297 pepT BPUM_3555 - peptidase T 3500 41.03 0 3517778..3517972 + 64 157694298 - BPUM_3556 - hypothetical protein 3501 35.35 -1 3518057..3518749 - 230 157694299 - BPUM_3557 - hypothetical protein 3502 40.88 0 3518896..3519756 + 286 157694300 - BPUM_3558 - transcriptional regulator 3503 46.31 +1 3519955..3520848 + 297 157694301 - BPUM_3559 - tartronate semialdehyde reductase 3504 41.53 0 3520850..3522277 + 475 157694302 - BPUM_3560 - hypothetical protein 3505 44.55 0 3522329..3523648 + 439 157694303 - BPUM_3561 - GntP family gluconate:proton (H+) symporter 3506 45.28 +1 3523929..3525050 + 373 157694304 - BPUM_3562 - hypothetical protein 3507 33.42 -2 3525317..3526432 - 371 157694305 - BPUM_3563 - hypothetical protein 3508 35.78 -1 3526429..3527082 - 217 157694306 mglA BPUM_3564 - ABC transporter ATP-binding protein 3509 40.78 0 3527444..3528880 - 478 157694307 bglH BPUM_3565 - beta-glucosidase 3510 42.03 0 3528834..3530741 - 635 157694308 - BPUM_3566 - PTS family glucose/glucoside (glc) porter component IIABC 3511 34.89 -1 3531069..3531902 - 277 157694309 licT1 BPUM_3567 - transcription antiterminator 3512 37.98 0 3532189..3533544 + 451 157694310 - BPUM_3568 - transposase 3513 39.83 0 3533664..3534479 - 271 157694311 ywqG BPUM_3569 - hypothetical protein 3514 40.60 0 3534653..3535492 - 279 157694312 - BPUM_3570 - chemotaxis sensory transducer 3515 41.50 0 3535645..3536379 - 244 157694313 ykoC BPUM_3571 - cobalt ABC transporter 3516 42.71 0 3536369..3537967 - 532 157694314 - BPUM_3572 - ABC transporter ATP-binding protein 3517 45.33 +1 3537942..3538541 - 199 157694315 ykoE BPUM_3573 - ABC transporter ATP-binding protein 3518 44.54 0 3538538..3539224 - 228 157694316 - BPUM_3574 - thiaminase 3519 40.25 0 3539472..3540599 - 375 157694317 - BPUM_3575 - hypothetical protein 3520 40.64 0 3540741..3541397 - 218 157694318 yraA BPUM_3576 - C56 family peptidase 3521 37.58 0 3541652..3541816 + 54 157694319 - BPUM_3577 - hypothetical protein 3522 39.25 0 3541851..3542222 - 123 157694320 - BPUM_3578 - hypothetical protein 3523 35.69 -1 3542228..3542482 - 84 157694321 - BPUM_3579 - hypothetical protein 3524 42.40 0 3542690..3545071 - 793 157694322 - BPUM_3580 - M6 family metalloendopeptidase 3525 41.16 0 3545261..3545554 - 97 157694323 ycnE BPUM_3581 - hypothetical protein 3526 40.85 0 3545580..3546218 - 212 157694324 ydgI BPUM_3582 - NAD(P)H nitroreductase 3527 41.22 0 3546233..3546676 - 147 157694325 ydgJ BPUM_3583 - MarR family transcriptional regulator 3528 33.97 -1 3546704..3546859 + 51 157694326 - BPUM_3584 - hypothetical protein 3529 44.47 0 3546884..3548185 - 433 157694327 pdp BPUM_3585 - pyrimidine-nucleoside phosphorylase 3530 41.12 0 3548211..3549392 - 393 157694328 nupC BPUM_3586 - CNT family concentrative nucleoside transporter 3531 44.94 +1 3549559..3550230 - 223 157694329 deoC BPUM_3587 - deoxyribose-phosphate aldolase 3532 45.29 +1 3550314..3551258 - 314 157694330 deoR BPUM_3588 - DeoR family transcriptional regulator 3533 41.84 0 3551319..3552329 - 336 157694331 - BPUM_3589 - aldose 1-epimerase 3534 43.59 0 3552436..3554259 + 607 157694332 yrhL BPUM_3590 - acyltransferase 3535 41.59 0 3554398..3555669 - 423 157694333 ydeG BPUM_3591 - major facilitator transporter 3536 45.90 +1 3555914..3557011 - 365 157694334 - BPUM_3592 - hypothetical protein 3537 46.47 +1 3557008..3557715 - 235 157694335 - BPUM_3593 - SAM-dependent methyltransferase 3538 45.93 +1 3557845..3558852 + 335 157694336 - BPUM_3594 - LuxR family transcriptional regulator 3539 41.94 0 3559094..3559906 - 270 157694337 yxeH BPUM_3595 - HAD family hydrolase 3540 35.28 -1 3560216..3560575 + 119 157694338 yyaN BPUM_3596 - transcriptional regulator 3541 40.61 0 3560685..3561701 + 338 157694339 - BPUM_3597 - dehydrogenase 3542 42.18 0 3561744..3563258 - 504 157694340 - BPUM_3598 - sensor histidine kinase 3543 40.96 0 3563578..3564915 + 445 157694341 - BPUM_3599 - amino acid APC transporter 3544 43.90 0 3564949..3566055 - 368 157694342 yhaZ BPUM_3600 - DNA alkylation repair protein 3545 44.85 +1 3566146..3567474 - 442 157694343 - BPUM_3601 - GntP family gluconate:proton (H+) symporter 3546 45.05 +1 3567499..3569043 - 514 157694344 gntK BPUM_3602 - gluconokinase 3547 40.91 0 3569228..3570085 - 285 157694345 ybbH BPUM_3603 - transcriptional regulator 3548 45.09 +1 3570177..3571112 - 311 157694346 - BPUM_3604 - purine nucleosidase 3549 31.06 -2 3571207..3571689 - 160 157694347 - BPUM_3605 - hypothetical protein 3550 33.13 -2 3571772..3572254 - 160 157694348 - BPUM_3606 - hypothetical protein 3551 34.74 -1 3572338..3572835 - 165 157694349 - BPUM_3607 - hypothetical protein 3552 40.38 0 3572960..3574450 + 496 157694350 - BPUM_3608 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0