version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3411 42.78 0 3428061..3428441 - 126 157694209 qoxD BPUM_3461 - cytochrome aa3 quinol oxidase subunit IV 3412 41.91 0 3428443..3429060 - 205 157694210 qoxC BPUM_3462 - cytochrome aa3 quinol oxidase subunit III 3413 42.42 0 3429060..3431018 - 652 157694211 qoxB BPUM_3463 - cytochrome aa3 quinol oxidase subunit I 3414 40.52 0 3431046..3432005 - 319 157694212 qoxA BPUM_3464 - cytochrome aa3 quinol oxidase subunit II 3415 44.51 0 3432519..3433601 - 360 157694213 - BPUM_3465 - M24 family peptidase-like protein 3416 44.25 0 3433606..3435126 - 506 157694214 galT BPUM_3466 - galactose-1-phosphate uridylyltransferase 3417 46.22 +1 3435161..3436153 - 330 157694215 galE1 BPUM_3467 - UDP-glucose 4-epimerase 3418 44.56 0 3436153..3437337 - 394 157694216 galK BPUM_3468 - galactokinase 3419 43.50 0 3437514..3438359 + 281 157694217 yesS BPUM_3469 - AraC family transcription regulator 3420 41.47 0 3438395..3438652 - 85 157694218 - BPUM_3470 - hypothetical protein 3421 39.06 0 3438680..3439063 - 127 157694219 ywcD BPUM_3471 - GtrA family integral membrane protein 3422 43.33 0 3439959..3440648 + 229 157694220 - BPUM_3472 - O-antigen biosynthesis protein 3423 43.20 0 3440641..3441309 + 222 157694221 - BPUM_3473 - streptomycin biosynthesis protein 3424 40.24 0 3441589..3441834 - 81 157694222 - BPUM_3474 - hypothetical protein 3425 34.57 -1 3441824..3442951 - 375 157694223 rapE BPUM_3475 - aspartate phosphatase response regulator 3426 34.96 -1 3443413..3443658 - 81 157694224 - BPUM_3476 - hypothetical protein 3427 37.37 -1 3443692..3444360 + 222 157694225 - BPUM_3477 - hypothetical protein 3428 41.59 0 3444786..3445100 + 104 157694226 ywcB BPUM_3478 - hypothetical protein 3429 46.56 +1 3445097..3446638 + 513 157694227 ywcA BPUM_3479 - SSS family solute/sodium (Na+) symporter 3430 41.03 0 3446633..3446788 - 51 157694228 - BPUM_3480 - hypothetical protein 3431 36.28 -1 3447130..3447468 + 112 157694229 - BPUM_3481 - hypothetical protein 3432 40.53 0 3447494..3447868 - 124 157694230 - BPUM_3482 - hypothetical protein 3433 42.90 0 3448003..3448671 - 222 157694231 thiE BPUM_3483 - thiamine-phosphate pyrophosphorylase 3434 47.92 +1 3448668..3449483 - 271 157694232 thiM BPUM_3484 - hydroxyethylthiazole kinase 3435 41.33 0 3449501..3450388 - 295 157694233 ywbI BPUM_3485 - transcriptional regulator 3436 40.36 0 3450554..3450937 + 127 157694234 lrgA BPUM_3486 - holin-like protein 3437 44.79 +1 3450931..3451611 + 226 157694235 lrgB BPUM_3487 - murein hydrolase LrgB 3438 40.52 0 3451649..3452830 - 393 157694236 ywbD BPUM_3488 - S-adenosylmethionine (SAM)-dependent methyltransferase 3439 38.54 0 3452948..3453331 + 127 157694237 ywbC BPUM_3489 - glyoxalase 3440 42.52 0 3453411..3454139 - 242 157694238 - BPUM_3490 - glutamine ABC transporter ATP-binding protein 3441 29.89 -2 3455774..3455947 - 57 157694239 - BPUM_3493 - hypothetical protein 3442 36.00 -1 3456142..3457227 + 361 157694240 rapD2 BPUM_3494 - aspartate phosphatase response regulator 3443 35.23 -1 3457436..3458068 - 210 157694241 ywaC BPUM_3495 - hypothetical protein 3444 43.39 0 3458163..3459176 - 337 157694242 - BPUM_3496 - sugar ABC transporter ATP-binding/membrane protein 3445 45.22 +1 3459173..3460669 - 498 157694243 - BPUM_3497 - sugar ABC transporter ATP-binding protein 3446 44.68 0 3460739..3461857 - 372 157694244 - BPUM_3498 - sugar ABC transporter ATP-binding protein 3447 42.44 0 3462252..3463679 - 475 157694245 - BPUM_3499 - hypothetical protein 3448 42.58 0 3464046..3465137 + 363 157694246 ywaA BPUM_3500 - branched-chain amino acid aminotransferase 3449 38.10 0 3465242..3465430 + 62 157694247 - BPUM_3501 - hypothetical protein 3450 38.19 0 3465456..3465908 - 150 157694248 - BPUM_3502 - hypothetical protein 3451 45.22 +1 3465973..3467301 - 442 157694249 licH2 BPUM_3503 - 6-phospho-beta-glucosidase 3452 45.57 +1 3467298..3467624 - 108 157694250 licA BPUM_3504 - PTS family oligomeric beta-glucoside porter component IIA 3453 46.00 +1 3467651..3469000 - 449 157694251 licC BPUM_3505 - PTS family oligomeric beta-glucoside porter component IIC 3454 38.89 0 3469015..3469320 - 101 157694252 licB BPUM_3506 - PTS family oligomeric beta-glucoside porter component IIB 3455 43.86 0 3469440..3471386 - 648 157694253 - BPUM_3507 - transcription antiterminator BglG 3456 41.14 0 3471624..3472238 - 204 157694254 - BPUM_3508 - C60 family sortase A 3457 41.94 0 3472308..3473690 - 460 157694255 - BPUM_3509 - hypothetical protein 3458 35.96 -1 3473816..3473929 - 37 157694256 yxzF BPUM_3510 - hypothetical protein 3459 44.35 0 3474013..3475383 - 456 157694257 gdhA BPUM_3511 - glutamate dehydrogenase 3460 40.85 0 3475698..3475910 - 70 157694258 yxlD BPUM_3512 - hypothetical protein 3461 41.99 0 3475907..3476218 - 103 157694259 yxlC BPUM_3513 - hypothetical protein 3462 41.62 0 3476218..3476748 - 176 157694260 sigY BPUM_3514 - RNA polymerase sigma factor SigY 3463 40.43 0 3477232..3478260 + 342 157694261 pelB BPUM_3515 - pectate lyase 3464 45.21 +1 3478318..3480051 - 577 157694262 cydD BPUM_3516 - ABC transporter ATP-binding protein 3465 44.67 0 3480041..3481777 - 578 157694263 cydC BPUM_3517 - ABC transporter ATP-binding protein 3466 45.43 +1 3481777..3482793 - 338 157694264 cydB BPUM_3518 - cytochrome bd ubiquinol oxidase subunit II 3467 41.95 0 3482780..3484195 - 471 157694265 cydA BPUM_3519 - cytochrome bd ubiquinol oxidase subunit I 3468 43.94 0 3484527..3485648 - 373 157694266 - BPUM_3520 - iron ABC transporter ATP-binding protein 3469 49.70 +2 3485650..3486663 - 337 157694267 - BPUM_3521 - iron ABC transporter membrane protein 3470 45.58 +1 3486660..3487598 - 312 157694268 - BPUM_3522 - iron ABC transporter binding protein 3471 43.82 0 3487617..3488369 - 250 157694269 - BPUM_3523 - C60 family sortase B 3472 47.08 +1 3488396..3489166 - 256 157694270 - BPUM_3524 - iron ABC transporter ATP-binding protein 3473 46.50 +1 3489153..3490139 - 328 157694271 - BPUM_3525 - iron ABC transporter membrane protein 3474 45.05 +1 3490173..3491060 - 295 157694272 - BPUM_3526 - iron ABC transporter binding protein 3475 42.04 0 3494480..3494812 - 110 157694273 - BPUM_3529 - hypothetical protein 3476 43.62 0 3494988..3495881 + 297 157694274 - BPUM_3530 - glyoxalase family protein 3477 44.62 0 3495859..3496620 + 253 157694275 ribAB BPUM_3531 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 3478 46.06 +1 3496607..3497698 + 363 157694276 ribD1 BPUM_3532 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 3479 38.46 0 3498161..3498316 + 51 157694277 - BPUM_3534 - hypothetical protein 3480 44.83 +1 3498932..3499792 - 286 157694278 yxkH BPUM_3535 - polysaccharide deacetylase 3481 42.90 0 3499858..3500202 - 114 157694279 ptcA BPUM_3536 - PTS family cellobiose porter component IIA 3482 41.98 0 3500207..3500530 - 107 157694280 - BPUM_3537 - PTS family cellobiose porter component IIB 3483 43.38 0 3500543..3501976 - 477 157694281 - BPUM_3538 - beta-glucosidase 3484 43.55 0 3502546..3503856 - 436 157694282 - BPUM_3540 - PTS family porter component IIC 3485 42.27 0 3503946..3505904 - 652 157694283 - BPUM_3541 - transcriptional regulator 3486 42.28 0 3506011..3506256 + 81 157694284 - BPUM_3542 - hypothetical protein 3487 42.02 0 3506301..3506726 - 141 157694285 - BPUM_3543 - hypothetical protein 3488 40.15 0 3507009..3507272 - 87 157694286 ywqIA BPUM_3544 - hypothetical protein 3489 46.24 +1 3507310..3507735 - 141 157694287 - BPUM_3545 - hypothetical protein 3490 39.22 0 3508034..3509443 - 469 157694288 mleN BPUM_3546 - NhaC family H(+)/lactate-Na(+) antiporter 3491 42.83 0 3509587..3511008 - 473 157694289 ansB2 BPUM_3547 - aspartate ammonia-lyase 3492 40.30 0 3511037..3512026 - 329 157694290 ansA BPUM_3548 - asparaginase 3493 42.53 0 3512234..3512581 + 115 157694291 ansR BPUM_3549 - transcriptional regulator 3494 42.74 0 3512635..3513102 - 155 157694292 - BPUM_3550 - DNA-binding protein 3495 40.15 0 3513201..3513728 - 175 157694293 yfjD BPUM_3551 - hypothetical protein 3496 42.42 0 3513750..3514508 - 252 157694294 yfjC BPUM_3552 - hypothetical protein 3497 44.70 0 3514521..3515717 - 398 157694295 yfjB BPUM_3553 - hypothetical protein 3498 46.85 +1 3515722..3516054 - 110 157694296 yfjA BPUM_3554 - hypothetical protein 3499 41.77 0 3516272..3517504 + 410 157694297 pepT BPUM_3555 - peptidase T 3500 41.03 0 3517778..3517972 + 64 157694298 - BPUM_3556 - hypothetical protein 3501 35.35 -1 3518057..3518749 - 230 157694299 - BPUM_3557 - hypothetical protein 3502 40.88 0 3518896..3519756 + 286 157694300 - BPUM_3558 - transcriptional regulator 3503 46.31 +1 3519955..3520848 + 297 157694301 - BPUM_3559 - tartronate semialdehyde reductase 3504 41.53 0 3520850..3522277 + 475 157694302 - BPUM_3560 - hypothetical protein 3505 44.55 0 3522329..3523648 + 439 157694303 - BPUM_3561 - GntP family gluconate:proton (H+) symporter 3506 45.28 +1 3523929..3525050 + 373 157694304 - BPUM_3562 - hypothetical protein 3507 33.42 -2 3525317..3526432 - 371 157694305 - BPUM_3563 - hypothetical protein 3508 35.78 -1 3526429..3527082 - 217 157694306 mglA BPUM_3564 - ABC transporter ATP-binding protein 3509 40.78 0 3527444..3528880 - 478 157694307 bglH BPUM_3565 - beta-glucosidase 3510 42.03 0 3528834..3530741 - 635 157694308 - BPUM_3566 - PTS family glucose/glucoside (glc) porter component IIABC 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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