version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3350 41.59 0 3371487..3373763 - 758 157694148 - BPUM_3398 - glycosyltransferase 3351 36.33 -1 3373883..3374416 - 177 157694149 - BPUM_3399 - hypothetical protein 3352 45.86 +1 3374397..3375242 - 281 157694150 - BPUM_3400 - lipoate--protein ligase 3353 45.48 +1 3375399..3375785 - 128 157694151 - BPUM_3401 - hypothetical protein 3354 28.62 -2 3376046..3376363 - 105 157694152 - BPUM_3402 - hypothetical protein 3355 34.78 -1 3376385..3376660 - 91 157694153 - BPUM_3403 - hypothetical protein 3356 38.17 0 3376641..3376826 - 61 157694154 - BPUM_3404 - hypothetical protein 3357 31.31 -2 3377115..3377510 - 131 157694155 - BPUM_3405 - hypothetical protein 3358 31.19 -2 3377799..3378125 - 108 157694156 - BPUM_3406 - hypothetical protein 3359 38.39 0 3378141..3379664 - 507 157694157 - BPUM_3407 - transposase 3360 40.14 0 3379676..3379954 - 92 157694158 - BPUM_3408 - hypothetical protein 3361 36.70 -1 3380532..3380798 - 88 157694159 - BPUM_3410 - hypothetical protein 3362 44.04 0 3380812..3382146 - 444 157694160 - BPUM_3411 - TRAP-T family tripartite ATP-independent periplasmic membrane protein 3363 40.07 0 3382188..3383063 - 291 157694161 - BPUM_3412 - 3-hydroxyisobutyrate dehydrogenase 3364 43.75 0 3383076..3383747 - 223 157694162 - BPUM_3413 - dimethylmenaquinone methyltransferase 3365 40.96 0 3383892..3384743 - 283 157694163 - BPUM_3414 - transcriptional regulator 3366 42.49 0 3384859..3385830 - 323 157694164 pta BPUM_3415 - phosphotransacetylase 3367 44.36 0 3386071..3386841 + 256 157694165 ywfI BPUM_3416 - putative heme peroxidase 3368 44.36 0 3386908..3388068 + 386 157694166 - BPUM_3417 - major facilitator transporter 3369 41.58 0 3388082..3388627 - 181 157694167 - BPUM_3418 - Lrp/Asn family transcriptional regulator 3370 46.15 +1 3388707..3389939 + 410 157694168 ywfA BPUM_3419 - major facilitator transporter 3371 41.13 0 3390089..3390691 + 200 157694169 bacA BPUM_3420 - bacilysin biosynthesis protein BacA 3372 43.22 0 3390693..3391400 + 235 157694170 bacB BPUM_3421 - bacilysin biosynthesis protein BacB 3373 45.67 +1 3391397..3392158 + 253 157694171 bacC BPUM_3422 - bacilysin biosynthesis protein BacC 3374 43.53 0 3392174..3393595 + 473 157694172 bacD BPUM_3423 - bacilysin biosynthesis protein BacD 3375 44.28 0 3393611..3394807 + 398 157694173 ywfG BPUM_3424 - transaminase 3376 42.65 0 3394822..3395658 - 278 157694174 ywfH BPUM_3425 - short chain dehydrogenase 3377 43.86 0 3395715..3396170 - 151 157694175 spsL BPUM_3426 - spore coat polysaccharide biosynthesis protein SpsL 3378 45.26 +1 3396163..3397017 - 284 157694176 spsK BPUM_3427 - spore coat polysaccharide biosynthesis protein SpsK 3379 42.65 0 3397021..3397986 - 321 157694177 spsJ BPUM_3428 - spore coat polysaccharide biosynthesis protein SpsJ 3380 40.76 0 3397983..3398723 - 246 157694178 spsI BPUM_3429 - spore coat polysaccharide biosynthesis protein SpsI 3381 42.57 0 3398726..3399754 - 342 157694179 spsG BPUM_3430 - spore coat polysaccharide biosynthesis protein SpsG 3382 42.78 0 3399751..3400491 - 246 157694180 spsF BPUM_3431 - spore coat polysaccharide biosynthesis protein SpsF 3383 46.31 +1 3400481..3401605 - 374 157694181 spsE BPUM_3432 - spore coat polysaccharide biosynthesis protein SpsE 3384 43.84 0 3401607..3402482 - 291 157694182 spsD BPUM_3433 - spore coat polysaccharide biosynthesis protein SpsD 3385 45.38 +1 3402479..3403657 - 392 157694183 spsC BPUM_3434 - spore coat polysaccharide biosynthesis protein SpsC 3386 43.38 0 3403679..3405091 - 470 157694184 spsB BPUM_3435 - spore coat polysaccharide biosynthesis protein SpsB 3387 41.92 0 3405098..3405877 - 259 157694185 spsA BPUM_3436 - spore coat polysaccharide biosynthesis protein SpsA 3388 40.74 0 3406044..3406718 + 224 157694186 - BPUM_3437 - hypothetical protein 3389 45.12 +1 3406942..3407484 + 180 157694187 gerQ BPUM_3438 - spore coat protein GerQ 3390 43.53 0 3407614..3408231 + 205 157694188 - BPUM_3439 - hypothetical protein 3391 42.74 0 3408272..3408643 - 123 157694189 ywdK BPUM_3440 - hypothetical protein 3392 43.73 0 3408714..3410021 - 435 157694190 ywdJ BPUM_3441 - NCS2 family nucleobase:cation symporter-2 3393 47.15 +1 3410055..3410387 - 110 157694191 ywdI BPUM_3442 - hypothetical protein 3394 44.35 0 3411951..3412631 - 226 157694192 ung BPUM_3444 - uracil-DNA glycosylase 3395 45.89 +1 3412628..3413455 - 275 157694193 ywdF BPUM_3445 - glycosyltransferase 3396 41.67 0 3413584..3413763 + 59 157694194 - BPUM_3446 - hypothetical protein 3397 43.64 0 3413760..3413924 + 54 157694195 - BPUM_3447 - hypothetical protein 3398 46.54 +1 3414051..3414860 + 269 157694196 thiD BPUM_3448 - pyridoxal kinase 3399 40.67 0 3414906..3415982 - 358 157694197 - BPUM_3449 - peptidase 3400 35.99 -1 3416131..3416469 - 112 157694198 ywdA BPUM_3450 - hypothetical protein 3401 43.20 0 3416575..3418044 - 489 157694199 sacA BPUM_3451 - beta-fructofuranosidase 3402 43.34 0 3418052..3419440 - 462 157694200 sacP BPUM_3452 - PTS family sucrose (suc) porter component IIBC 3403 40.89 0 3419695..3420528 - 277 157694201 sacT BPUM_3453 - transcriptional antiterminator 3404 44.80 +1 3420581..3420859 - 92 157694202 - BPUM_3454 - hypothetical protein 3405 43.92 0 3421360..3423786 + 808 157694203 vpr BPUM_3455 - endopeptidase 3406 36.31 -1 3423774..3423941 - 55 157694204 - BPUM_3456 - hypothetical protein 3407 46.51 +1 3424111..3425112 - 333 157694205 ywcH BPUM_3457 - flavin utilizing monoxygenase 3408 43.33 0 3425168..3425917 - 249 157694206 nfrA BPUM_3458 - flavin reductase 3409 40.43 0 3426028..3427239 - 403 157694207 rodA BPUM_3459 - cell wall protein 3410 39.33 0 3427716..3427982 + 88 157694208 ywcE BPUM_3460 - spore morphogenesis and germination protein YwcE 3411 42.78 0 3428061..3428441 - 126 157694209 qoxD BPUM_3461 - cytochrome aa3 quinol oxidase subunit IV 3412 41.91 0 3428443..3429060 - 205 157694210 qoxC BPUM_3462 - cytochrome aa3 quinol oxidase subunit III 3413 42.42 0 3429060..3431018 - 652 157694211 qoxB BPUM_3463 - cytochrome aa3 quinol oxidase subunit I 3414 40.52 0 3431046..3432005 - 319 157694212 qoxA BPUM_3464 - cytochrome aa3 quinol oxidase subunit II 3415 44.51 0 3432519..3433601 - 360 157694213 - BPUM_3465 - M24 family peptidase-like protein 3416 44.25 0 3433606..3435126 - 506 157694214 galT BPUM_3466 - galactose-1-phosphate uridylyltransferase 3417 46.22 +1 3435161..3436153 - 330 157694215 galE1 BPUM_3467 - UDP-glucose 4-epimerase 3418 44.56 0 3436153..3437337 - 394 157694216 galK BPUM_3468 - galactokinase 3419 43.50 0 3437514..3438359 + 281 157694217 yesS BPUM_3469 - AraC family transcription regulator 3420 41.47 0 3438395..3438652 - 85 157694218 - BPUM_3470 - hypothetical protein 3421 39.06 0 3438680..3439063 - 127 157694219 ywcD BPUM_3471 - GtrA family integral membrane protein 3422 43.33 0 3439959..3440648 + 229 157694220 - BPUM_3472 - O-antigen biosynthesis protein 3423 43.20 0 3440641..3441309 + 222 157694221 - BPUM_3473 - streptomycin biosynthesis protein 3424 40.24 0 3441589..3441834 - 81 157694222 - BPUM_3474 - hypothetical protein 3425 34.57 -1 3441824..3442951 - 375 157694223 rapE BPUM_3475 - aspartate phosphatase response regulator 3426 34.96 -1 3443413..3443658 - 81 157694224 - BPUM_3476 - hypothetical protein 3427 37.37 -1 3443692..3444360 + 222 157694225 - BPUM_3477 - hypothetical protein 3428 41.59 0 3444786..3445100 + 104 157694226 ywcB BPUM_3478 - hypothetical protein 3429 46.56 +1 3445097..3446638 + 513 157694227 ywcA BPUM_3479 - SSS family solute/sodium (Na+) symporter 3430 41.03 0 3446633..3446788 - 51 157694228 - BPUM_3480 - hypothetical protein 3431 36.28 -1 3447130..3447468 + 112 157694229 - BPUM_3481 - hypothetical protein 3432 40.53 0 3447494..3447868 - 124 157694230 - BPUM_3482 - hypothetical protein 3433 42.90 0 3448003..3448671 - 222 157694231 thiE BPUM_3483 - thiamine-phosphate pyrophosphorylase 3434 47.92 +1 3448668..3449483 - 271 157694232 thiM BPUM_3484 - hydroxyethylthiazole kinase 3435 41.33 0 3449501..3450388 - 295 157694233 ywbI BPUM_3485 - transcriptional regulator 3436 40.36 0 3450554..3450937 + 127 157694234 lrgA BPUM_3486 - holin-like protein 3437 44.79 +1 3450931..3451611 + 226 157694235 lrgB BPUM_3487 - murein hydrolase LrgB 3438 40.52 0 3451649..3452830 - 393 157694236 ywbD BPUM_3488 - S-adenosylmethionine (SAM)-dependent methyltransferase 3439 38.54 0 3452948..3453331 + 127 157694237 ywbC BPUM_3489 - glyoxalase 3440 42.52 0 3453411..3454139 - 242 157694238 - BPUM_3490 - glutamine ABC transporter ATP-binding protein 3441 29.89 -2 3455774..3455947 - 57 157694239 - BPUM_3493 - hypothetical protein 3442 36.00 -1 3456142..3457227 + 361 157694240 rapD2 BPUM_3494 - aspartate phosphatase response regulator 3443 35.23 -1 3457436..3458068 - 210 157694241 ywaC BPUM_3495 - hypothetical protein 3444 43.39 0 3458163..3459176 - 337 157694242 - BPUM_3496 - sugar ABC transporter ATP-binding/membrane protein 3445 45.22 +1 3459173..3460669 - 498 157694243 - BPUM_3497 - sugar ABC transporter ATP-binding protein 3446 44.68 0 3460739..3461857 - 372 157694244 - BPUM_3498 - sugar ABC transporter ATP-binding protein 3447 42.44 0 3462252..3463679 - 475 157694245 - BPUM_3499 - hypothetical protein 3448 42.58 0 3464046..3465137 + 363 157694246 ywaA BPUM_3500 - branched-chain amino acid aminotransferase 3449 38.10 0 3465242..3465430 + 62 157694247 - BPUM_3501 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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