version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3312 43.41 0 3335122..3336729 - 535 157694110 pyrG BPUM_3360 - CTP synthetase 3313 39.26 0 3336968..3337507 - 179 157694111 - BPUM_3361 - DNA-directed RNA polymerase subunit delta 3314 32.94 -2 3337947..3338450 - 167 157694112 - BPUM_3362 - hypothetical protein 3315 35.45 -1 3338429..3339043 - 204 157694113 lanH BPUM_3363 - ABC transporter ATP-binding protein 3316 33.15 -2 3339074..3339604 - 176 157694114 - BPUM_3364 - hypothetical protein 3317 32.28 -2 3339618..3340751 - 377 157694115 - BPUM_3365 - hypothetical protein 3318 36.72 -1 3340760..3340936 - 58 157694116 - BPUM_3366 - hypothetical protein 3319 40.28 0 3341088..3341303 - 71 157694117 - BPUM_3367 - hypothetical protein 3320 30.77 -2 3341601..3341756 - 51 157694118 - BPUM_3368 - hypothetical protein 3321 32.29 -2 3342380..3342571 - 63 157694119 - BPUM_3369 - hypothetical protein 3322 48.38 +2 3342879..3344021 - 380 157694120 - BPUM_3370 - acyl-CoA dehydrogenase (NADP(+)) 3323 45.64 +1 3344038..3345150 - 370 157694121 mmgC BPUM_3371 - acyl-CoA dehydrogenase (NADP(+)) 3324 43.98 0 3345162..3346025 - 287 157694122 mmgB BPUM_3372 - 3-hydroxybutyryl-CoA dehydrogenase 3325 48.81 +2 3346045..3347220 - 391 157694123 mmgA BPUM_3373 - acetyl-CoA C-acetyltransferase 3326 45.79 +1 3347323..3349434 - 703 157694124 ywjF BPUM_3374 - Fe-S dehydrogenase 3327 40.35 0 3349578..3350774 + 398 157694125 ywjE BPUM_3375 - phospholipase D 3328 45.38 +1 3350787..3351749 + 320 157694126 uvsE BPUM_3376 - putative UV damage endonuclease 3329 34.12 -1 3351823..3352077 + 84 157694127 ywjC BPUM_3377 - hypothetical protein 3330 44.84 +1 3352104..3353102 - 332 157694128 - BPUM_3378 - microcin immunity protein 3331 43.59 0 3353373..3355088 - 571 157694129 ywjA BPUM_3379 - ABC transporter ATP-binding protein 3332 40.25 0 3355194..3356696 - 500 157694130 ywiE BPUM_3380 - cardiolipin synthetase 3333 45.58 +1 3356853..3357824 + 323 157694131 - BPUM_3381 - U61 family carboxypeptidase 3334 35.84 -1 3358215..3358493 + 92 157694132 yozM BPUM_3382 - hypothetical protein 3335 44.27 0 3358544..3360217 - 557 157694133 argS BPUM_3383 - arginyl-tRNA synthetase 3336 40.90 0 3360214..3360636 - 140 157694134 ywiB BPUM_3384 - hypothetical protein 3337 42.82 0 3360761..3361108 - 115 157694135 - BPUM_3385 - hypothetical protein 3338 45.36 +1 3361185..3362057 - 290 157694136 speB BPUM_3386 - agmatinase 3339 41.28 0 3362127..3362957 - 276 157694137 speE BPUM_3387 - spermidine synthase 3340 44.73 +1 3363182..3365251 + 689 157694138 ywhE BPUM_3388 - penicillin-binding protein 3341 42.00 0 3365385..3365903 - 172 157694139 ywhD BPUM_3389 - hypothetical protein 3342 43.74 0 3365916..3366578 - 220 157694140 ywhC BPUM_3390 - M50 family membrane metalloprotease 3343 43.55 0 3366686..3366871 + 61 157694141 ywhB BPUM_3391 - 4-oxalocrotonate tautomerase 3344 44.28 0 3366921..3367733 - 270 157694142 - BPUM_3392 - hypothetical protein 3345 41.32 0 3367959..3368459 - 166 157694143 ywgA BPUM_3393 - hypothetical protein 3346 44.01 0 3368490..3369791 - 433 157694144 ywfO BPUM_3394 - HD superfamily phosphohydrolase 3347 40.62 0 3369962..3370249 - 95 157694145 ywzC BPUM_3395 - hypothetical protein 3348 45.07 +1 3370422..3371222 + 266 157694146 rsfA BPUM_3396 - transcriptional regulator 3349 36.75 -1 3371257..3371490 - 77 157694147 - BPUM_3397 - hypothetical protein 3350 41.59 0 3371487..3373763 - 758 157694148 - BPUM_3398 - glycosyltransferase 3351 36.33 -1 3373883..3374416 - 177 157694149 - BPUM_3399 - hypothetical protein 3352 45.86 +1 3374397..3375242 - 281 157694150 - BPUM_3400 - lipoate--protein ligase 3353 45.48 +1 3375399..3375785 - 128 157694151 - BPUM_3401 - hypothetical protein 3354 28.62 -2 3376046..3376363 - 105 157694152 - BPUM_3402 - hypothetical protein 3355 34.78 -1 3376385..3376660 - 91 157694153 - BPUM_3403 - hypothetical protein 3356 38.17 0 3376641..3376826 - 61 157694154 - BPUM_3404 - hypothetical protein 3357 31.31 -2 3377115..3377510 - 131 157694155 - BPUM_3405 - hypothetical protein 3358 31.19 -2 3377799..3378125 - 108 157694156 - BPUM_3406 - hypothetical protein 3359 38.39 0 3378141..3379664 - 507 157694157 - BPUM_3407 - transposase 3360 40.14 0 3379676..3379954 - 92 157694158 - BPUM_3408 - hypothetical protein 3361 36.70 -1 3380532..3380798 - 88 157694159 - BPUM_3410 - hypothetical protein 3362 44.04 0 3380812..3382146 - 444 157694160 - BPUM_3411 - TRAP-T family tripartite ATP-independent periplasmic membrane protein 3363 40.07 0 3382188..3383063 - 291 157694161 - BPUM_3412 - 3-hydroxyisobutyrate dehydrogenase 3364 43.75 0 3383076..3383747 - 223 157694162 - BPUM_3413 - dimethylmenaquinone methyltransferase 3365 40.96 0 3383892..3384743 - 283 157694163 - BPUM_3414 - transcriptional regulator 3366 42.49 0 3384859..3385830 - 323 157694164 pta BPUM_3415 - phosphotransacetylase 3367 44.36 0 3386071..3386841 + 256 157694165 ywfI BPUM_3416 - putative heme peroxidase 3368 44.36 0 3386908..3388068 + 386 157694166 - BPUM_3417 - major facilitator transporter 3369 41.58 0 3388082..3388627 - 181 157694167 - BPUM_3418 - Lrp/Asn family transcriptional regulator 3370 46.15 +1 3388707..3389939 + 410 157694168 ywfA BPUM_3419 - major facilitator transporter 3371 41.13 0 3390089..3390691 + 200 157694169 bacA BPUM_3420 - bacilysin biosynthesis protein BacA 3372 43.22 0 3390693..3391400 + 235 157694170 bacB BPUM_3421 - bacilysin biosynthesis protein BacB 3373 45.67 +1 3391397..3392158 + 253 157694171 bacC BPUM_3422 - bacilysin biosynthesis protein BacC 3374 43.53 0 3392174..3393595 + 473 157694172 bacD BPUM_3423 - bacilysin biosynthesis protein BacD 3375 44.28 0 3393611..3394807 + 398 157694173 ywfG BPUM_3424 - transaminase 3376 42.65 0 3394822..3395658 - 278 157694174 ywfH BPUM_3425 - short chain dehydrogenase 3377 43.86 0 3395715..3396170 - 151 157694175 spsL BPUM_3426 - spore coat polysaccharide biosynthesis protein SpsL 3378 45.26 +1 3396163..3397017 - 284 157694176 spsK BPUM_3427 - spore coat polysaccharide biosynthesis protein SpsK 3379 42.65 0 3397021..3397986 - 321 157694177 spsJ BPUM_3428 - spore coat polysaccharide biosynthesis protein SpsJ 3380 40.76 0 3397983..3398723 - 246 157694178 spsI BPUM_3429 - spore coat polysaccharide biosynthesis protein SpsI 3381 42.57 0 3398726..3399754 - 342 157694179 spsG BPUM_3430 - spore coat polysaccharide biosynthesis protein SpsG 3382 42.78 0 3399751..3400491 - 246 157694180 spsF BPUM_3431 - spore coat polysaccharide biosynthesis protein SpsF 3383 46.31 +1 3400481..3401605 - 374 157694181 spsE BPUM_3432 - spore coat polysaccharide biosynthesis protein SpsE 3384 43.84 0 3401607..3402482 - 291 157694182 spsD BPUM_3433 - spore coat polysaccharide biosynthesis protein SpsD 3385 45.38 +1 3402479..3403657 - 392 157694183 spsC BPUM_3434 - spore coat polysaccharide biosynthesis protein SpsC 3386 43.38 0 3403679..3405091 - 470 157694184 spsB BPUM_3435 - spore coat polysaccharide biosynthesis protein SpsB 3387 41.92 0 3405098..3405877 - 259 157694185 spsA BPUM_3436 - spore coat polysaccharide biosynthesis protein SpsA 3388 40.74 0 3406044..3406718 + 224 157694186 - BPUM_3437 - hypothetical protein 3389 45.12 +1 3406942..3407484 + 180 157694187 gerQ BPUM_3438 - spore coat protein GerQ 3390 43.53 0 3407614..3408231 + 205 157694188 - BPUM_3439 - hypothetical protein 3391 42.74 0 3408272..3408643 - 123 157694189 ywdK BPUM_3440 - hypothetical protein 3392 43.73 0 3408714..3410021 - 435 157694190 ywdJ BPUM_3441 - NCS2 family nucleobase:cation symporter-2 3393 47.15 +1 3410055..3410387 - 110 157694191 ywdI BPUM_3442 - hypothetical protein 3394 44.35 0 3411951..3412631 - 226 157694192 ung BPUM_3444 - uracil-DNA glycosylase 3395 45.89 +1 3412628..3413455 - 275 157694193 ywdF BPUM_3445 - glycosyltransferase 3396 41.67 0 3413584..3413763 + 59 157694194 - BPUM_3446 - hypothetical protein 3397 43.64 0 3413760..3413924 + 54 157694195 - BPUM_3447 - hypothetical protein 3398 46.54 +1 3414051..3414860 + 269 157694196 thiD BPUM_3448 - pyridoxal kinase 3399 40.67 0 3414906..3415982 - 358 157694197 - BPUM_3449 - peptidase 3400 35.99 -1 3416131..3416469 - 112 157694198 ywdA BPUM_3450 - hypothetical protein 3401 43.20 0 3416575..3418044 - 489 157694199 sacA BPUM_3451 - beta-fructofuranosidase 3402 43.34 0 3418052..3419440 - 462 157694200 sacP BPUM_3452 - PTS family sucrose (suc) porter component IIBC 3403 40.89 0 3419695..3420528 - 277 157694201 sacT BPUM_3453 - transcriptional antiterminator 3404 44.80 +1 3420581..3420859 - 92 157694202 - BPUM_3454 - hypothetical protein 3405 43.92 0 3421360..3423786 + 808 157694203 vpr BPUM_3455 - endopeptidase 3406 36.31 -1 3423774..3423941 - 55 157694204 - BPUM_3456 - hypothetical protein 3407 46.51 +1 3424111..3425112 - 333 157694205 ywcH BPUM_3457 - flavin utilizing monoxygenase 3408 43.33 0 3425168..3425917 - 249 157694206 nfrA BPUM_3458 - flavin reductase 3409 40.43 0 3426028..3427239 - 403 157694207 rodA BPUM_3459 - cell wall protein 3410 39.33 0 3427716..3427982 + 88 157694208 ywcE BPUM_3460 - spore morphogenesis and germination protein YwcE 3411 42.78 0 3428061..3428441 - 126 157694209 qoxD BPUM_3461 - cytochrome aa3 quinol oxidase subunit IV 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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