version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3254 41.67 0 3285176..3285523 + 115 157694052 nrgB BPUM_3301 - nitrogen-regulated PII-like protein 3255 40.58 0 3285603..3286499 - 298 157694053 spoIIQ BPUM_3302 - stage II sporulation membrane protein Q 3256 42.63 0 3286631..3287125 + 164 157694054 ywnH BPUM_3303 - acetyltransferase 3257 39.17 0 3287360..3287890 - 176 157694055 - BPUM_3304 - hypothetical protein 3258 39.96 0 3287887..3288444 - 185 157694056 - BPUM_3305 - hypothetical protein 3259 39.35 0 3288446..3290257 - 603 157694057 ygaD BPUM_3306 - ABC transporter ATP-binding protein 3260 36.59 -1 3290302..3290853 + 183 157694058 - BPUM_3307 - hypothetical protein 3261 40.25 0 3290899..3291303 - 134 157694059 - BPUM_3308 - hypothetical protein 3262 38.53 0 3291831..3292253 + 140 157694060 ywnG BPUM_3309 - hypothetical protein 3263 34.67 -1 3292396..3292545 + 49 157694061 rpmG BPUM_3310 - 50S ribosomal protein L33 3264 38.85 0 3292627..3293823 + 398 157694062 yciC BPUM_3311 - cobalamin synthesis protein 3265 38.52 0 3293840..3294109 + 89 157694063 rpsN2 BPUM_3312 - ribosomal protein S14 3266 28.89 -2 3294184..3294363 - 59 157694064 - BPUM_3313 - hypothetical protein 3267 38.10 0 3294363..3295370 - 335 157694065 moaA BPUM_3314 - molybdenum cofactor biosynthesis protein A 3268 36.38 -1 3295381..3296169 - 262 157694066 fdhD BPUM_3315 - formate dehydrogenase accessory protein 3269 40.52 0 3296304..3297569 + 421 157694067 ybfB BPUM_3316 - major facilitator superfamily oxalate:formate antiporter 3270 43.08 0 3297652..3300000 + 782 157694068 - BPUM_3317 - dehydrogenase alpha (molybdopterin) subunit 3271 40.27 0 3300053..3300730 - 225 157694069 ywmD BPUM_3318 - hypothetical protein 3272 38.60 0 3300813..3301514 - 233 157694070 ywmC BPUM_3319 - hypothetical protein 3273 40.64 0 3301837..3302862 - 341 157694071 spoIID BPUM_3320 - stage II sporulation protein D 3274 43.12 0 3303118..3304425 - 435 157694072 murAA BPUM_3321 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3275 35.65 -1 3304458..3305192 - 244 157694073 ywmB BPUM_3322 - hypothetical protein 3276 36.80 -1 3305321..3305551 - 76 157694074 ywzB BPUM_3323 - hypothetical protein 3277 41.62 0 3305689..3306195 + 168 157694075 ywmA BPUM_3324 - hypothetical protein 3278 46.97 +1 3306237..3306632 - 131 157694076 atpC BPUM_3325 - H(+)-transporting two-sector ATPase, F(1) epsilon subunit 3279 44.51 0 3306657..3308078 - 473 157694077 atpD BPUM_3326 - F0F1 ATP synthase subunit beta 3280 43.02 0 3308103..3308969 - 288 157694078 atpG BPUM_3327 - F0F1 ATP synthase subunit gamma 3281 43.67 0 3309058..3310566 - 502 157694079 atpA BPUM_3328 - F0F1 ATP synthase subunit alpha 3282 42.12 0 3310583..3311128 - 181 157694080 atpH BPUM_3329 - F0F1 ATP synthase subunit delta 3283 39.57 0 3311125..3311637 - 170 157694081 atpF BPUM_3330 - F0F1 ATP synthase subunit B 3284 42.72 0 3311758..3311970 - 70 157694082 atpE BPUM_3331 - F0F1 ATP synthase subunit C 3285 40.68 0 3312019..3312753 - 244 157694083 atpB BPUM_3332 - F0F1 ATP synthase subunit A 3286 39.32 0 3312761..3313144 - 127 157694084 atpI BPUM_3333 - H(+)-transporting two-sector ATPase, F(0) subunit I 3287 40.63 0 3313641..3314270 - 209 157694085 upp BPUM_3334 - uracil phosphoribosyltransferase 3288 42.47 0 3314418..3315665 - 415 157694086 glyA BPUM_3335 - serine hydroxymethyltransferase 3289 47.59 +1 3315842..3316381 - 179 157694087 ywlG BPUM_3336 - hypothetical protein 3290 43.78 0 3316394..3316843 - 149 157694088 ywlF BPUM_3337 - ribose-5-phosphate isomerase B 3291 43.57 0 3316984..3317442 - 152 157694089 ywlE BPUM_3338 - protein-tyrosine-phosphatase YwlE 3292 44.32 0 3317506..3318060 - 184 157694090 ywlD BPUM_3339 - hypothetical protein 3293 45.36 +1 3318121..3319176 - 351 157694091 ywlC BPUM_3340 - hypothetical protein 3294 42.57 0 3319335..3319778 - 147 157694092 ywlB BPUM_3341 - hypothetical protein 3295 41.25 0 3319842..3320498 - 218 157694093 spoIIR BPUM_3342 - stage II sporulation protein R 3296 37.08 -1 3320618..3321097 - 159 157694094 - BPUM_3343 - hypothetical protein 3297 47.41 +1 3321236..3322123 - 295 157694095 hemK BPUM_3344 - polypeptide chain release factor methyltransferase 3298 42.98 0 3322113..3323180 - 355 157694096 prfA BPUM_3345 - peptide chain release factor 1 3299 41.71 0 3323391..3323939 + 182 157694097 racA BPUM_3346 - polar chromosome segregation protein 3300 40.23 0 3323974..3324930 - 318 157694098 ywkB BPUM_3347 - malonate efflux carrier 3301 41.33 0 3325023..3326723 - 566 157694099 ywkA BPUM_3348 - malate dehydrogenase 3302 42.79 0 3327003..3327605 - 200 157694100 tdk BPUM_3349 - thymidine kinase 3303 39.80 0 3327693..3327893 - 66 157694101 rpmE2 BPUM_3350 - 50S ribosomal protein L31 3304 33.33 -2 3329455..3329610 + 51 157694102 - BPUM_3352 - hypothetical protein 3305 45.03 +1 3329673..3330638 - 321 157694103 ywjI BPUM_3353 - fructose 1,6-bisphosphatase II 3306 46.51 +1 3330671..3331960 - 429 157694104 murAB BPUM_3354 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3307 38.79 0 3332043..3332207 - 54 157694105 - BPUM_3355 - hypothetical protein 3308 43.66 0 3332208..3332846 - 212 157694106 ywjH BPUM_3356 - putative translaldolase 3309 41.84 0 3332958..3333815 - 285 157694107 fbaA BPUM_3357 - fructose-bisphosphate aldolase 3310 37.07 -1 3333994..3334368 - 124 157694108 spo0F BPUM_3358 - stage 0 sporulation initiation phosphotransferase F 3311 45.39 +1 3334549..3335079 + 176 157694109 ywjG BPUM_3359 - hypothetical protein 3312 43.41 0 3335122..3336729 - 535 157694110 pyrG BPUM_3360 - CTP synthetase 3313 39.26 0 3336968..3337507 - 179 157694111 - BPUM_3361 - DNA-directed RNA polymerase subunit delta 3314 32.94 -2 3337947..3338450 - 167 157694112 - BPUM_3362 - hypothetical protein 3315 35.45 -1 3338429..3339043 - 204 157694113 lanH BPUM_3363 - ABC transporter ATP-binding protein 3316 33.15 -2 3339074..3339604 - 176 157694114 - BPUM_3364 - hypothetical protein 3317 32.28 -2 3339618..3340751 - 377 157694115 - BPUM_3365 - hypothetical protein 3318 36.72 -1 3340760..3340936 - 58 157694116 - BPUM_3366 - hypothetical protein 3319 40.28 0 3341088..3341303 - 71 157694117 - BPUM_3367 - hypothetical protein 3320 30.77 -2 3341601..3341756 - 51 157694118 - BPUM_3368 - hypothetical protein 3321 32.29 -2 3342380..3342571 - 63 157694119 - BPUM_3369 - hypothetical protein 3322 48.38 +2 3342879..3344021 - 380 157694120 - BPUM_3370 - acyl-CoA dehydrogenase (NADP(+)) 3323 45.64 +1 3344038..3345150 - 370 157694121 mmgC BPUM_3371 - acyl-CoA dehydrogenase (NADP(+)) 3324 43.98 0 3345162..3346025 - 287 157694122 mmgB BPUM_3372 - 3-hydroxybutyryl-CoA dehydrogenase 3325 48.81 +2 3346045..3347220 - 391 157694123 mmgA BPUM_3373 - acetyl-CoA C-acetyltransferase 3326 45.79 +1 3347323..3349434 - 703 157694124 ywjF BPUM_3374 - Fe-S dehydrogenase 3327 40.35 0 3349578..3350774 + 398 157694125 ywjE BPUM_3375 - phospholipase D 3328 45.38 +1 3350787..3351749 + 320 157694126 uvsE BPUM_3376 - putative UV damage endonuclease 3329 34.12 -1 3351823..3352077 + 84 157694127 ywjC BPUM_3377 - hypothetical protein 3330 44.84 +1 3352104..3353102 - 332 157694128 - BPUM_3378 - microcin immunity protein 3331 43.59 0 3353373..3355088 - 571 157694129 ywjA BPUM_3379 - ABC transporter ATP-binding protein 3332 40.25 0 3355194..3356696 - 500 157694130 ywiE BPUM_3380 - cardiolipin synthetase 3333 45.58 +1 3356853..3357824 + 323 157694131 - BPUM_3381 - U61 family carboxypeptidase 3334 35.84 -1 3358215..3358493 + 92 157694132 yozM BPUM_3382 - hypothetical protein 3335 44.27 0 3358544..3360217 - 557 157694133 argS BPUM_3383 - arginyl-tRNA synthetase 3336 40.90 0 3360214..3360636 - 140 157694134 ywiB BPUM_3384 - hypothetical protein 3337 42.82 0 3360761..3361108 - 115 157694135 - BPUM_3385 - hypothetical protein 3338 45.36 +1 3361185..3362057 - 290 157694136 speB BPUM_3386 - agmatinase 3339 41.28 0 3362127..3362957 - 276 157694137 speE BPUM_3387 - spermidine synthase 3340 44.73 +1 3363182..3365251 + 689 157694138 ywhE BPUM_3388 - penicillin-binding protein 3341 42.00 0 3365385..3365903 - 172 157694139 ywhD BPUM_3389 - hypothetical protein 3342 43.74 0 3365916..3366578 - 220 157694140 ywhC BPUM_3390 - M50 family membrane metalloprotease 3343 43.55 0 3366686..3366871 + 61 157694141 ywhB BPUM_3391 - 4-oxalocrotonate tautomerase 3344 44.28 0 3366921..3367733 - 270 157694142 - BPUM_3392 - hypothetical protein 3345 41.32 0 3367959..3368459 - 166 157694143 ywgA BPUM_3393 - hypothetical protein 3346 44.01 0 3368490..3369791 - 433 157694144 ywfO BPUM_3394 - HD superfamily phosphohydrolase 3347 40.62 0 3369962..3370249 - 95 157694145 ywzC BPUM_3395 - hypothetical protein 3348 45.07 +1 3370422..3371222 + 266 157694146 rsfA BPUM_3396 - transcriptional regulator 3349 36.75 -1 3371257..3371490 - 77 157694147 - BPUM_3397 - hypothetical protein 3350 41.59 0 3371487..3373763 - 758 157694148 - BPUM_3398 - glycosyltransferase 3351 36.33 -1 3373883..3374416 - 177 157694149 - BPUM_3399 - hypothetical protein 3352 45.86 +1 3374397..3375242 - 281 157694150 - BPUM_3400 - lipoate--protein ligase 3353 45.48 +1 3375399..3375785 - 128 157694151 - BPUM_3401 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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