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Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2898 41.37 0 2933223..2933471 + 82 157693696 - BPUM_2944 - hypothetical protein 2899 41.09 0 2933484..2933831 + 115 157693697 - BPUM_2945 - hypothetical protein 2900 30.90 -2 2934035..2934898 + 287 157693698 - BPUM_2946 - hypothetical protein 2901 24.24 -2 2934917..2935180 + 87 157693699 - BPUM_2947 - hypothetical protein 2902 40.00 0 2935225..2935479 - 84 157693700 - BPUM_2948 - hypothetical protein 2903 44.16 0 2935552..2936382 - 276 157693701 - BPUM_2949 - iron ABC transporter 2904 43.18 0 2936531..2936977 - 148 157693702 - BPUM_2950 - hypothetical protein 2905 44.72 0 2937092..2937934 + 280 157693703 - BPUM_2951 - short chain dehydrogenase 2906 42.74 0 2937981..2939351 - 456 157693704 - BPUM_2952 - peptidase 2907 42.33 0 2939688..2940365 + 225 157693705 cssR BPUM_2953 - response regulator 2908 39.94 0 2940362..2941693 + 443 157693706 cssS BPUM_2954 - sensor histidine kinase 2909 35.76 -1 2941714..2941878 - 54 157693707 - BPUM_2955 - hypothetical protein 2910 40.39 0 2942071..2942949 + 292 157693708 - BPUM_2956 - TetR family transcriptional regulator 2911 41.72 0 2943029..2944423 - 464 157693709 fumC BPUM_2957 - fumarate hydratase 2912 32.74 -2 2944513..2944680 - 55 157693710 - BPUM_2958 - hypothetical protein 2913 41.40 0 2944795..2946219 + 474 157693711 gerAA BPUM_2959 - spore germination protein AA 2914 40.55 0 2946206..2947300 + 364 157693712 gerAB BPUM_2960 - spore germination protein AB 2915 39.84 0 2947297..2948418 + 373 157693713 gerAC BPUM_2961 - spore germination protein AC 2916 44.17 0 2948456..2948824 + 122 157693714 - BPUM_2962 - hypothetical protein 2917 40.57 0 2948872..2949507 - 211 157693715 - BPUM_2963 - response regulator 2918 44.13 0 2949504..2950568 - 354 157693716 - BPUM_2964 - sensor histidine kinase 2919 40.22 0 2950565..2951290 - 241 157693717 - BPUM_2965 - hypothetical protein 2920 40.46 0 2951360..2952229 - 289 157693718 - BPUM_2966 - hypothetical protein 2921 41.74 0 2952341..2953006 - 221 157693719 - BPUM_2967 - bacteriophage shock protein A 2922 43.00 0 2953022..2953414 - 130 157693720 - BPUM_2968 - hypothetical protein 2923 46.67 +1 2953749..2954318 - 189 157693721 - BPUM_2969 - cob(I)yrinic acid a,c-diamide adenosyltransferase 2924 29.27 -2 2954367..2954489 + 40 157693722 - BPUM_2970 - hypothetical protein 2925 43.37 0 2954508..2955254 + 248 157693723 - BPUM_2971 - 3-oxoacyl-[acyl-carrier-protein] reductase 2926 45.22 +1 2955272..2956297 - 341 157693724 pdxA BPUM_2972 - 4-hydroxythreonine-4-phosphate dehydrogenase 2927 43.90 0 2956273..2957616 - 447 157693725 - BPUM_2973 - hypothetical protein 2928 41.13 0 2957642..2959423 - 593 157693726 - BPUM_2974 - transcriptional regulator 2929 43.28 0 2959570..2960745 - 391 157693727 - BPUM_2975 - hypothetical protein 2930 41.79 0 2960742..2962148 - 468 157693728 - BPUM_2976 - SSS family solute/sodium (Na+) symporter 2931 44.84 +1 2962222..2963394 - 390 157693729 - BPUM_2977 - alcohol dehydrogenase 2932 44.44 0 2963402..2964301 - 299 157693730 dapA3 BPUM_2978 - dihydrodipicolinate synthase 2933 44.55 0 2964483..2965766 - 427 157693731 - BPUM_2979 - iron ABC transporter ATP-binding protein 2934 44.76 +1 2965763..2966821 - 352 157693732 - BPUM_2980 - iron ABC transporter membrane protein 2935 40.59 0 2966787..2967737 - 316 157693733 - BPUM_2981 - iron ABC transporter binding protein 2936 33.33 -2 2967814..2967906 - 30 157693734 - BPUM_2982 - hypothetical protein 2937 43.89 0 2967912..2969303 - 463 157693735 - BPUM_2983 - glycoside hydrolase 2938 40.63 0 2969324..2970817 - 497 157693736 uxaA BPUM_2984 - mannonate dehydratase 2939 42.73 0 2970814..2972271 - 485 157693737 uxaB BPUM_2985 - altronate oxidoreductase 2940 39.96 0 2972331..2973341 - 336 157693738 - BPUM_2986 - LacI family transcriptional regulator 2941 40.99 0 2973410..2974846 - 478 157693739 uxaC BPUM_2987 - glucuronate isomerase 2942 37.83 0 2974983..2976737 - 584 157693740 - BPUM_2988 - sensor histidine kinase 2943 39.00 0 2976741..2977463 - 240 157693741 - BPUM_2989 - response regulator 2944 43.26 0 2977640..2978455 - 271 157693742 fhuC BPUM_2990 - ferrichrome ABC transporter 2945 42.82 0 2978475..2979497 - 340 157693743 fhuG BPUM_2991 - ferrichrome ABC transporter membrane protein 2946 47.20 +1 2979498..2980550 - 350 157693744 fhuB BPUM_2992 - ferrichrome ABC transporter membrane protein 2947 28.21 -2 2980625..2980702 - 25 157693745 - BPUM_2993 - hypothetical protein 2948 40.89 0 2980810..2981748 + 312 157693746 - BPUM_2994 - ferrichrome ABC transporter 2949 42.22 0 2981784..2983190 - 468 157693747 - BPUM_2995 - APC family amino acid-polyamine-organocation transporter 2950 43.78 0 2983322..2983522 - 66 157693748 - BPUM_2996 - hypothetical protein 2951 40.28 0 2983680..2983823 - 47 157693749 sspJ BPUM_2997 - small acid-soluble spore protein J 2952 39.86 0 2983906..2984334 - 142 157693750 - BPUM_2998 - MarR family transcriptional regulator 2953 33.33 -2 2984380..2984526 - 48 157693751 - BPUM_2999 - hypothetical protein 2954 45.71 +1 2984507..2985007 + 166 157693752 - BPUM_3000 - hypothetical protein 2955 39.01 0 2985124..2986974 + 616 157693753 - BPUM_3001 - sulfatase 2956 40.75 0 2987108..2987902 + 264 157693754 - BPUM_3002 - molybdenum ABC transporter ATP-binding protein 2957 46.91 +1 2987902..2988564 + 220 157693755 - BPUM_3003 - molybdenum ABC transporter membrane protein 2958 41.96 0 2988605..2989450 - 281 157693756 - BPUM_3004 - aldo/keto reductase 2959 46.55 +1 2989520..2990389 - 289 157693757 - BPUM_3005 - ROK family protein 2960 42.56 0 2990453..2992468 - 671 157693758 - BPUM_3006 - CPA1 family monovalent cation:proton (H+) antiporter-1 2961 45.59 +1 2992787..2993398 - 203 157693759 - BPUM_3007 - hypothetical protein 2962 40.10 0 2993545..2993958 - 137 157693760 bdbC BPUM_3008 - disulfide dehydrogenase C 2963 37.85 0 2993955..2994641 - 228 157693761 bdbD BPUM_3009 - disulfide dehydrogenase D 2964 43.71 0 2994786..2996885 - 699 157693762 - BPUM_3010 - P-ATPase superfamily P-type ATPase metal transporter 2965 43.15 0 2997311..2998054 + 247 157693763 mntB BPUM_3011 - metal cation ABC transporter ATP-binding protein 2966 41.58 0 2998054..2998926 + 290 157693764 mntD BPUM_3012 - metal cation ABC transporter membrane protein 2967 41.21 0 2998940..2999878 + 312 157693765 mntA BPUM_3013 - metal cation ABC transporter ATP-binding protein 2968 46.45 +1 2999913..3000461 - 182 157693766 - BPUM_3014 - hypothetical protein 2969 43.19 0 3000551..3001159 + 202 157693767 pksA BPUM_3015 - transcriptional regulator 2970 41.16 0 3001175..3002107 - 310 157693768 - BPUM_3016 - response regulator 2971 42.37 0 3002104..3003420 - 438 157693769 - BPUM_3017 - sensor histidine kinase 2972 42.05 0 3003537..3004982 - 481 157693770 ansB1 BPUM_3018 - aspartate ammonia-lyase 2973 42.10 0 3004999..3006276 - 425 157693771 - BPUM_3019 - DAACS family dicarboxylate/amino acid:sodium or proton symporter 2974 38.52 0 3006453..3006587 - 44 157693772 - BPUM_3020 - hypothetical protein 2975 47.50 +1 3006584..3009019 - 811 157693773 - BPUM_3021 - P-ATPase superfamily P-type ATPase heavy metal transporter 2976 43.96 0 3009296..3009502 - 68 157693774 merP BPUM_3022 - MerTP family mercury (Hg2+) permease, binding protein MerP 2977 42.16 0 3009575..3009880 - 101 157693775 - BPUM_3023 - hypothetical protein 2978 41.89 0 3009982..3010437 - 151 157693776 - BPUM_3024 - hypothetical protein 2979 43.14 0 3010444..3010596 - 50 157693777 - BPUM_3025 - hypothetical protein 2980 41.57 0 3010716..3012305 - 529 157693778 - BPUM_3026 - diguanylate cyclase 2981 34.17 -1 3012550..3012789 + 79 157693779 - BPUM_3027 - hypothetical protein 2982 32.79 -2 3012927..3013478 - 183 157693780 - BPUM_3028 - hypothetical protein 2983 26.96 -2 3014188..3015018 + 276 157693781 - BPUM_3029 - hypothetical protein 2984 40.55 0 3015643..3016113 - 156 157693782 smpB BPUM_3030 - SsrA-binding protein 2985 43.70 0 3016253..3018595 - 780 157693783 rnr BPUM_3031 - ribonuclease R 2986 40.83 0 3018615..3019361 - 248 157693784 bioH BPUM_3032 - carboxylesterase 2987 40.60 0 3019486..3019719 - 77 157693785 secG BPUM_3033 - preprotein translocase subunit SecG 2988 30.59 -2 3019714..3019932 + 72 157693786 - BPUM_3034 - hypothetical protein 2989 37.80 0 3019906..3020196 - 96 157693787 abhA BPUM_3035 - transcriptional regulator 2990 36.32 -1 3020223..3020456 - 77 157693788 yvzC BPUM_3036 - transcriptional regulator 2991 39.26 0 3020610..3021014 + 134 157693789 - BPUM_3037 - transcriptional regulator 2992 41.35 0 3021145..3021543 + 132 157693790 - BPUM_3038 - hypothetical protein 2993 42.37 0 3021626..3021946 + 106 157693791 - BPUM_3039 - hypothetical protein 2994 43.91 0 3022027..3022716 - 229 157693792 opuCD BPUM_3040 - glycine betaine/carnitine/choline ABC transporter membrane protein 2995 41.07 0 3022738..3023655 - 305 157693793 opuCC BPUM_3041 - glycine betaine/carnitine/choline ABC transporter binding protein 2996 42.05 0 3023669..3024322 - 217 157693794 opuCB BPUM_3042 - glycine betaine/carnitine/choline ABC transporter membrane protein 2997 42.30 0 3024336..3025484 - 382 157693795 opuCA BPUM_3043 - glycine betaine/carnitine/choline ABC transporter ATP-binding protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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