version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2792 40.03 0 2835144..2835785 - 213 157693590 comA BPUM_2837 - response regulator ComA 2793 34.85 -1 2835866..2838172 - 768 157693591 comP BPUM_2838 - sensor histidine kinase ComP 2794 34.50 -1 2838186..2838356 - 56 157693592 comX BPUM_2839 - competence pheromone precursor ComX 2795 35.71 -1 2838334..2839257 - 307 157693593 - BPUM_2840 - hypothetical protein 2796 27.66 -2 2839409..2839549 - 46 157693594 degQ BPUM_2841 - degradation enzyme regulation protein DegQ 2797 48.02 +1 2840055..2840408 + 117 157693595 - BPUM_2842 - hypothetical protein 2798 39.04 0 2840440..2841666 - 408 157693596 - BPUM_2843 - metal-dependent hydrolase 2799 41.56 0 2841806..2843275 - 489 157693597 pncB BPUM_2844 - nicotinate phosphoribosyltransferase 2800 42.21 0 2843293..2843844 - 183 157693598 pncA BPUM_2845 - nicotinamidase 2801 41.42 0 2843905..2844312 - 135 157693599 - BPUM_2846 - hypothetical protein 2802 38.35 0 2844339..2844677 - 112 157693600 - BPUM_2847 - hypothetical protein 2803 44.59 0 2844684..2844905 - 73 157693601 yueG1 BPUM_2848 - spore germination protein YueG1 2804 46.85 +1 2845005..2845226 - 73 157693602 yueG2 BPUM_2849 - spore germination protein YueG2 2805 40.94 0 2845293..2846396 - 367 157693603 - BPUM_2850 - hypothetical protein 2806 42.62 0 2846582..2846818 - 78 157693604 - BPUM_2851 - hypothetical protein 2807 43.16 0 2847001..2848485 + 494 157693605 - BPUM_2852 - hypothetical protein 2808 44.01 0 2848482..2849015 - 177 157693606 - BPUM_2853 - metal-dependent phosphohydrolase 2809 45.02 +1 2849161..2849853 - 230 157693607 - BPUM_2854 - short chain dehydrogenase 2810 41.98 0 2850003..2850488 - 161 157693608 - BPUM_2855 - hypothetical protein 2811 40.55 0 2850478..2853375 - 965 157693609 - BPUM_2856 - hypothetical protein 2812 42.38 0 2853372..2857847 - 1491 157693610 - BPUM_2857 - FtsK/SpoIIIE family cell division protein YukA 2813 39.94 0 2857899..2859215 - 438 157693611 - BPUM_2858 - hypothetical protein 2814 40.00 0 2859230..2859469 - 79 157693612 yukD BPUM_2859 - hypothetical protein 2815 41.16 0 2859565..2859858 - 97 157693613 - BPUM_2860 - hypothetical protein 2816 39.76 0 2860263..2861492 + 409 157693614 - BPUM_2861 - hypothetical protein 2817 44.33 0 2861603..2862739 + 378 157693615 ald BPUM_2862 - alanine dehydrogenase 2818 44.05 0 2862855..2863451 + 198 157693616 bioY BPUM_2863 - biotin synthesis protein BioY 2819 42.86 0 2863509..2864285 - 258 157693617 spo0M BPUM_2864 - stage 0 sporulation control protein M 2820 43.64 0 2864463..2865791 - 442 157693618 - BPUM_2865 - GntP family gluconate:proton (H+) symporter 2821 43.66 0 2865933..2867423 - 496 157693619 pepA BPUM_2866 - leucyl aminopeptidase 2822 36.84 -1 2867463..2867576 + 37 157693620 - BPUM_2867 - hypothetical protein 2823 43.82 0 2867749..2868225 + 158 157693621 - BPUM_2868 - acid phosphatase/vanadium-dependent haloperoxidase 2824 42.17 0 2868269..2868913 - 214 157693622 - BPUM_2869 - lipoprotein 2825 36.14 -1 2869014..2869334 - 106 157693623 - BPUM_2870 - hypothetical protein 2826 36.84 -1 2869416..2869643 - 75 157693624 - BPUM_2871 - hypothetical protein 2827 41.91 0 2869672..2870883 - 403 157693625 - BPUM_2872 - NADH dehydrogenase 2828 43.64 0 2871280..2872278 + 332 157693626 - BPUM_2873 - ferredoxin--NAD(+) reductase 2829 45.89 +1 2872325..2872531 - 68 157693627 - BPUM_2874 - hypothetical protein 2830 35.01 -1 2872727..2873143 + 138 157693628 - BPUM_2875 - hypothetical protein 2831 46.56 +1 2873264..2873626 - 120 157693629 - BPUM_2876 - iron sulfur assembly protein 2832 44.09 0 2873700..2874554 - 284 157693630 dapF BPUM_2877 - diaminopimelate epimerase 2833 35.76 -1 2874573..2874737 + 54 157693631 - BPUM_2878 - hypothetical protein 2834 41.35 0 2874825..2875061 - 78 157693632 - BPUM_2879 - hypothetical protein 2835 33.93 -1 2875063..2875230 + 55 157693633 - BPUM_2880 - hypothetical protein 2836 42.60 0 2875317..2876384 + 355 157693634 - BPUM_2881 - NADH dehydrogenase 2837 40.26 0 2876434..2876664 - 76 157693635 - BPUM_2882 - hypothetical protein 2838 37.27 -1 2876765..2877094 - 109 157693636 - BPUM_2883 - hypothetical protein 2839 43.46 0 2877279..2877515 + 78 157693637 - BPUM_2884 - iron-sulfur assembly protein 2840 45.05 +1 2877559..2879529 - 656 157693638 - BPUM_2885 - peptidase 2841 45.66 +1 2879833..2880765 - 310 157693639 thrB BPUM_2886 - homoserine kinase 2842 46.33 +1 2880762..2881823 - 353 157693640 thrC1 BPUM_2887 - threonine synthase 2843 41.63 0 2881823..2883124 - 433 157693641 thrA BPUM_2888 - homoserine dehydrogenase 2844 47.66 +1 2883333..2884316 - 327 157693642 - BPUM_2889 - D-isomer specific 2-hydroxyacid dehydrogenase 2845 43.15 0 2884402..2885430 - 342 157693643 cotS BPUM_2890 - spore coat protein S 2846 42.12 0 2885545..2886045 + 166 157693644 pgpA BPUM_2891 - phosphatidylglycerophosphatase 2847 42.41 0 2886087..2886857 - 256 157693645 - BPUM_2892 - HAD family hydrolase 2848 43.45 0 2886879..2887313 - 144 157693646 - BPUM_2893 - hypothetical protein 2849 35.14 -1 2887333..2887608 - 91 157693647 - BPUM_2894 - hypothetical protein 2850 42.77 0 2887729..2888364 + 211 157693648 - BPUM_2895 - lipoprotein 2851 43.26 0 2888404..2889300 - 298 157693649 lipA BPUM_2896 - lipoyl synthase 2852 44.34 0 2889591..2890571 + 326 157693650 - BPUM_2897 - M23B subfamily peptidase 2853 30.30 -2 2890628..2890858 - 76 157693651 - BPUM_2898 - hypothetical protein 2854 42.02 0 2890985..2891755 - 256 157693652 yunB BPUM_2899 - sporulation protein YunB 2855 43.79 0 2891825..2892130 - 101 157693653 - BPUM_2900 - hypothetical protein 2856 43.89 0 2892198..2893571 - 457 157693654 ushA BPUM_2901 - bifunctional 5'-nucleotidase/2',3'-cyclic phosphodiesterase 2857 42.49 0 2893635..2894486 - 283 157693655 - BPUM_2902 - hypothetical protein 2858 42.81 0 2894805..2895965 + 386 157693656 - BPUM_2903 - transcriptional regulator 2859 46.25 +1 2896030..2897190 + 386 157693657 - BPUM_2904 - hypothetical protein 2860 43.91 0 2897242..2898432 - 396 157693658 - BPUM_2905 - major facilitator superfamily multidrug:cation symporter 2861 45.93 +1 2898593..2899846 - 417 157693659 - BPUM_2906 - aminotransferase 2862 45.39 +1 2899997..2900875 + 292 157693660 end1 BPUM_2907 - deoxyribonuclease I 2863 44.22 0 2900890..2901633 - 247 157693661 - BPUM_2908 - hypothetical protein 2864 45.57 +1 2901656..2902693 - 345 157693662 - BPUM_2909 - iron ABC transporter membrane protein 2865 45.72 +1 2902686..2903702 - 338 157693663 - BPUM_2910 - iron ABC transporter membrane protein 2866 39.94 0 2903773..2904726 - 317 157693664 - BPUM_2911 - iron ABC transporter 2867 43.56 0 2904866..2905774 - 302 157693665 - BPUM_2912 - lysophospholipase 2868 38.33 0 2905840..2906739 - 299 157693666 - BPUM_2913 - hydrolase 2869 38.69 0 2907047..2907475 - 142 157693667 psiE BPUM_2914 - phosphate-starvation-inducible protein PsiE 2870 43.12 0 2907513..2908820 - 435 157693668 - BPUM_2915 - sensor histidine kinase 2871 42.67 0 2908807..2909502 - 231 157693669 - BPUM_2916 - response regulator 2872 27.27 -2 2909601..2909699 + 32 157693670 - BPUM_2917 - hypothetical protein 2873 41.19 0 2909755..2910963 + 402 157693671 - BPUM_2918 - hypothetical protein 2874 27.40 -2 2911073..2913076 - 667 157693672 - BPUM_2919 - hypothetical protein 2875 34.62 -1 2914129..2915061 - 310 157693673 - BPUM_2921 - hypothetical protein 2876 35.94 -1 2915146..2915796 + 216 157693674 acpH BPUM_2922 - [acyl-carrier-protein] phosphodiesterase 2877 42.42 0 2915861..2917258 - 465 157693675 sufB BPUM_2923 - ABC transporter ATP-binding protein 2878 41.83 0 2917276..2917722 - 148 157693676 nifU BPUM_2924 - Fe-S cluster assembly protein NifU 2879 46.11 +1 2917712..2918932 - 406 157693677 csd BPUM_2925 - cysteine desulfurase 2880 42.16 0 2918932..2920245 - 437 157693678 sufD BPUM_2926 - iron ABC transporter membrane protein 2881 42.11 0 2920264..2921049 - 261 157693679 sufC BPUM_2927 - iron ABC transporter ATP-binding protein 2882 42.86 0 2921261..2921428 - 55 157693680 - BPUM_2928 - hypothetical protein 2883 43.90 0 2921614..2921982 - 122 157693681 - BPUM_2929 - carboxymuconolactone decarboxylase 2884 37.47 0 2922087..2922908 - 273 157693682 - BPUM_2930 - ABC transporter ATP-binding protein 2885 40.66 0 2922923..2923591 - 222 157693683 - BPUM_2931 - ABC transporter ATP-binding protein 2886 44.05 0 2923584..2924609 - 341 157693684 - BPUM_2932 - ABC transporter ATP-binding protein 2887 43.14 0 2924645..2924797 + 50 157693685 - BPUM_2933 - hypothetical protein 2888 41.81 0 2924975..2925316 - 113 157693686 - BPUM_2934 - hypothetical protein 2889 38.94 0 2925437..2925739 - 100 157693687 - BPUM_2935 - thioredoxin 2890 42.37 0 2925752..2926105 - 117 157693688 - BPUM_2936 - TOPRIM domain-containing protein 2891 37.80 0 2926225..2926470 - 81 157693689 - BPUM_2937 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0