version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2411 41.46 0 2454253..2455557 - 434 157693209 folC BPUM_2448 - tetrahydrofolate synthase 2412 43.78 0 2455623..2458265 - 880 157693210 valS BPUM_2449 - valyl-tRNA synthetase 2413 43.92 0 2458723..2458911 + 62 157693211 - BPUM_2450 - hypothetical protein 2414 43.41 0 2458958..2459989 - 343 157693212 ysxE BPUM_2451 - hypothetical protein 2415 43.35 0 2460027..2461304 - 425 157693213 spoVID BPUM_2452 - spore coat assembly protein SpoVID 2416 45.24 +1 2461627..2462919 - 430 157693214 hemL BPUM_2453 - glutamate-1-semialdehyde aminotransferase 2417 41.98 0 2462947..2463918 - 323 157693215 hemB BPUM_2454 - delta-aminolevulinic acid dehydratase 2418 43.94 0 2463915..2464706 - 263 157693216 hemD BPUM_2455 - uroporphyrinogen III synthase 2419 44.02 0 2464703..2465638 - 311 157693217 hemC BPUM_2456 - porphobilinogen deaminase 2420 38.39 0 2465680..2466510 - 276 157693218 hemX BPUM_2457 - cytochrome C biogenesis protein 2421 42.40 0 2466518..2467885 - 455 157693219 hemA BPUM_2458 - glutamyl-tRNA reductase 2422 39.92 0 2468128..2468613 + 161 157693220 ysxD BPUM_2459 - hypothetical protein 2423 41.67 0 2468657..2469244 - 195 157693221 ysxC BPUM_2460 - GTPase EngB 2424 42.80 0 2469241..2471565 - 774 157693222 lonA BPUM_2461 - class III heat-shock ATP-dependent Lon protease 2425 46.27 +1 2471737..2473398 - 553 157693223 lonB BPUM_2462 - ATP-dependent protease 2426 40.84 0 2473535..2474800 - 421 157693224 clpX BPUM_2463 - ATP-dependent protease ATP-binding subunit 2427 40.31 0 2475052..2476326 - 424 157693225 tig BPUM_2464 - trigger factor 2428 41.47 0 2476566..2477573 - 335 157693226 ysoA BPUM_2465 - hypothetical protein 2429 41.33 0 2477699..2478298 - 199 157693227 leuD BPUM_2466 - isopropylmalate isomerase small subunit 2430 45.13 +1 2478312..2479727 - 471 157693228 leuC BPUM_2467 - isopropylmalate isomerase large subunit 2431 44.81 +1 2479768..2480865 - 365 157693229 leuB BPUM_2468 - 3-isopropylmalate dehydrogenase 2432 42.28 0 2480884..2482437 - 517 157693230 leuA BPUM_2469 - 2-isopropylmalate synthase 2433 41.79 0 2482424..2483452 - 342 157693231 ilvC BPUM_2470 - ketol-acid reductoisomerase 2434 40.46 0 2483471..2483989 - 172 157693232 ilvH BPUM_2471 - acetolactate synthase 3 regulatory subunit 2435 45.22 +1 2483986..2485710 - 574 157693233 ilvB BPUM_2472 - acetolactate synthase catalytic subunit 2436 42.95 0 2486088..2487002 - 304 157693234 - BPUM_2473 - branched-chain amino acid aminotransferase 2437 43.49 0 2487437..2488480 + 347 157693235 - BPUM_2474 - 6-phosphogluconolactonase 2438 39.52 0 2488711..2489130 - 139 157693236 - BPUM_2475 - hypothetical protein 2439 38.82 0 2489226..2490392 - 388 157693237 dltD BPUM_2476 - D-alanine esterase DltD 2440 38.82 0 2490392..2490628 - 78 157693238 dltC BPUM_2477 - D-alanine--poly(phosphoribitol) ligase subunit 2 2441 39.41 0 2490650..2491834 - 394 157693239 dltB BPUM_2478 - D-alanine esterase DltB 2442 44.49 0 2491831..2493336 - 501 157693240 dltA BPUM_2479 - D-alanine--D-alanyl carrier protein ligase 2443 27.08 -2 2493351..2493494 - 47 157693241 - BPUM_2480 - D-Ala-teichoic acid biosynthesis protein 2444 39.65 0 2493834..2494229 + 131 157693242 - BPUM_2481 - glyoxalase 2445 37.22 -1 2494460..2494639 - 59 157693243 - BPUM_2482 - hypothetical protein 2446 33.33 -2 2494814..2495002 + 62 157693244 - BPUM_2483 - hypothetical protein 2447 36.77 -1 2495174..2496715 + 513 157693245 - BPUM_2484 - transposase 2448 31.85 -2 2496741..2497076 + 111 157693246 - BPUM_2485 - hypothetical protein 2449 36.36 -1 2497413..2497610 + 65 157693247 - BPUM_2487 - hypothetical protein 2450 40.88 0 2497974..2498954 + 326 157693248 - BPUM_2488 - dehydrogenase 2451 47.24 +1 2499582..2500106 - 174 157693249 ysnB BPUM_2489 - phosphoesterase 2452 44.61 0 2500121..2500714 - 197 157693250 ysnA BPUM_2490 - HAM1 protein 2453 43.76 0 2500734..2501462 - 242 157693251 rph BPUM_2491 - ribonuclease PH 2454 40.87 0 2501614..2502675 - 353 157693252 gerM BPUM_2492 - spore germination protein M 2455 43.71 0 2502777..2503595 - 272 157693253 racE BPUM_2493 - glutamate racemase 2456 40.82 0 2503603..2504043 - 146 157693254 ysmB BPUM_2494 - MarR family transcriptional regulator 2457 42.22 0 2504192..2504416 - 74 157693255 gerE BPUM_2495 - spore germination protein E 2458 44.04 0 2504622..2505938 - 438 157693256 - BPUM_2496 - CitMHS family citrate-magnesium (Mg2+):proton (H+) citrate-calcium (Ca2+): proton (H+) symporter 2459 40.53 0 2506091..2506951 - 286 157693257 yraN BPUM_2497 - LysR family transcriptional regulator 2460 44.56 0 2507087..2508217 + 376 157693258 yraM BPUM_2498 - hypothetical protein 2461 45.28 +1 2508245..2508964 - 239 157693259 - BPUM_2499 - biotin-(acetyl-CoA carboxylase) ligase 2462 43.51 0 2509043..2509504 - 153 157693260 ysmA BPUM_2500 - thioesterase 2463 44.97 +1 2509625..2510389 - 254 157693261 sdhB BPUM_2501 - succinate dehydrogenase iron-sulfur subunit 2464 45.49 +1 2510391..2512151 - 586 157693262 sdhA BPUM_2502 - succinate dehydrogenase flavoprotein subunit 2465 40.56 0 2512189..2512797 - 202 157693263 sdhC BPUM_2503 - succinate dehydrogenase cytochrome b558 subunit 2466 40.54 0 2513078..2513521 + 147 157693264 yslB BPUM_2504 - hypothetical protein 2467 43.82 0 2513689..2514918 - 409 157693265 lysC BPUM_2505 - aspartate kinase 2468 40.83 0 2515300..2517072 - 590 157693266 uvrC BPUM_2506 - excinuclease ABC subunit C 2469 38.41 0 2517212..2517526 - 104 157693267 trxA BPUM_2507 - thioredoxin 2470 44.90 +1 2517772..2519250 - 492 157693268 abfA BPUM_2508 - alpha-N-arabinofuranosidase 2471 45.81 +1 2519326..2520303 - 325 157693269 etfA BPUM_2509 - electron transfer flavoprotein alpha subunit 2472 43.80 0 2520348..2521121 - 257 157693270 etfB BPUM_2510 - electron transfer flavoprotein beta subunit 2473 45.00 +1 2521152..2521931 - 259 157693271 ysiB BPUM_2511 - enoyl-CoA hydratase 2474 37.95 0 2521958..2522542 - 194 157693272 ysiA BPUM_2512 - transcriptional regulator 2475 43.32 0 2522708..2524429 - 573 157693273 lcfA2 BPUM_2513 - long-chain-fatty-acid--CoA ligase 2476 39.25 0 2524531..2524986 - 151 157693274 - BPUM_2514 - hypothetical protein 2477 42.47 0 2525150..2525554 - 134 157693275 yshE BPUM_2515 - hypothetical protein 2478 42.14 0 2525569..2527929 - 786 157693276 mutS2 BPUM_2516 - recombination and DNA strand exchange inhibitor protein 2479 41.56 0 2527948..2529660 - 570 157693277 yshC BPUM_2517 - hypothetical protein 2480 40.45 0 2529775..2530308 - 177 157693278 yshB BPUM_2518 - hypothetical protein 2481 36.43 -1 2530316..2530573 - 85 157693279 yshA BPUM_2519 - hypothetical protein 2482 44.05 0 2530708..2531631 + 307 157693280 rnhC BPUM_2520 - ribonuclease HIII 2483 43.15 0 2531670..2534084 - 804 157693281 pheT BPUM_2521 - phenylalanyl-tRNA synthetase subunit beta 2484 41.93 0 2534100..2535134 - 344 157693282 pheS BPUM_2522 - phenylalanyl-tRNA synthetase subunit alpha 2485 44.49 0 2535511..2536254 - 247 157693283 ysgA BPUM_2523 - SpoU rRNA methylase family 2486 40.54 0 2536368..2536589 + 73 157693284 sspI BPUM_2524 - small acid-soluble spore protein SspI 2487 44.35 0 2536631..2538427 - 598 157693285 cstA BPUM_2525 - carbon starvation-induced protein 2488 28.85 -2 2538457..2538612 - 51 157693286 - BPUM_2526 - hypothetical protein 2489 44.17 0 2538779..2539867 - 362 157693287 ysdC BPUM_2527 - M42 family glutamyl aminopeptidase 2490 36.30 -1 2540047..2540451 + 134 157693288 ysdB BPUM_2528 - hypothetical protein 2491 44.32 0 2540469..2540732 - 87 157693289 ysdA BPUM_2529 - hypothetical protein 2492 42.22 0 2540796..2541155 - 119 157693290 rplT BPUM_2530 - 50S ribosomal protein L20 2493 38.31 0 2541187..2541387 - 66 157693291 rpmI BPUM_2531 - 50S ribosomal protein L35 2494 41.09 0 2542260..2542955 - 231 157693292 ysbB BPUM_2533 - antiholin-like protein LrgB 2495 39.41 0 2542970..2543413 - 147 157693293 ysbA BPUM_2534 - murein hydrolase regulator LrgA 2496 40.51 0 2543550..2544287 - 245 157693294 lytT BPUM_2535 - response regulator 2497 43.52 0 2544284..2546041 - 585 157693295 lytS BPUM_2536 - sensor histidine kinase 2498 39.62 0 2546217..2546996 + 259 157693296 ysaA BPUM_2537 - HAD family phosphatase 2499 43.87 0 2547055..2547984 - 309 157693297 - BPUM_2538 - methyl-accepting chemotaxis protein 2500 43.12 0 2548144..2550084 - 646 157693298 thrS BPUM_2539 - threonyl-tRNA synthetase 2501 39.77 0 2550421..2551290 - 289 157693299 ytxC BPUM_2540 - hypothetical protein 2502 46.17 +1 2551351..2551989 - 212 157693300 ytxB BPUM_2541 - hypothetical protein 2503 41.94 0 2552023..2552952 - 309 157693301 dnaI BPUM_2542 - primosomal protein DnaI 2504 43.79 0 2552970..2554394 - 474 157693302 dnaB BPUM_2543 - replicative DNA helicase 2505 40.83 0 2554959..2555345 - 128 157693303 - BPUM_2545 - hypothetical protein 2506 41.41 0 2555532..2555915 - 127 157693304 speD BPUM_2546 - S-adenosylmethionine decarboxylase proenzyme 2507 41.64 0 2556147..2557169 - 340 157693305 gapB BPUM_2547 - glyceraldehyde-3-phosphate dehydrogenase 2508 44.72 0 2557342..2557947 - 201 157693306 coaE BPUM_2548 - dephospho-CoA kinase 2509 44.71 0 2557962..2558594 - 210 157693307 ytaF BPUM_2549 - hypothetical protein 2510 44.77 +1 2558771..2559601 - 276 157693308 mutM BPUM_2550 - formamidopyrimidine-DNA glycosylase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0