version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2363 44.44 0 2408851..2409021 - 56 157693161 - BPUM_2398 - hypothetical protein 2364 45.13 +1 2409231..2410739 + 502 157693162 blyA BPUM_2399 - N-acetylmuramoyl-L-alanine amidase 2365 42.57 0 2410836..2411279 - 147 157693163 - BPUM_2400 - D-tyrosyl-tRNA deacylase 2366 42.51 0 2411298..2413508 - 736 157693164 relA BPUM_2401 - GTP diphosphokinase 2367 42.88 0 2413651..2414163 - 170 157693165 apt BPUM_2402 - adenine phosphoribosyltransferase 2368 42.80 0 2414187..2416511 - 774 157693166 recJ BPUM_2403 - recombination protein J 2369 40.96 0 2416593..2416946 - 117 157693167 yrvD BPUM_2404 - hypothetical protein 2370 41.32 0 2417472..2419700 - 742 157693168 secDF BPUM_2406 - bifunctional preprotein translocase subunit SecD/SecF 2371 34.34 -1 2419742..2420038 - 98 157693169 yrzD BPUM_2407 - hypothetical protein 2372 44.85 +1 2420142..2421704 + 520 157693170 spoVB BPUM_2408 - stage V sporulation protein B 2373 37.71 0 2421706..2422368 - 220 157693171 yrbG BPUM_2409 - hypothetical protein 2374 41.27 0 2422534..2422911 + 125 157693172 yrzE BPUM_2410 - hypothetical protein 2375 38.95 0 2422963..2423229 - 88 157693173 yajC BPUM_2411 - preprotein translocase subunit YajC 2376 43.37 0 2423277..2424422 - 381 157693174 tgt BPUM_2412 - queuine tRNA-ribosyltransferase 2377 43.54 0 2424453..2425481 - 342 157693175 queA BPUM_2413 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2378 37.31 -1 2425516..2425716 - 66 157693176 - BPUM_2414 - hypothetical protein 2379 46.17 +1 2425709..2426713 - 334 157693177 ruvB BPUM_2415 - Holliday junction DNA helicase B 2380 40.76 0 2426725..2427330 - 201 157693178 ruvA BPUM_2416 - Holliday junction DNA helicase motor protein 2381 41.13 0 2427479..2427991 - 170 157693179 bofC BPUM_2417 - bypass-of-forespore protein C 2382 40.16 0 2428217..2428861 + 214 157693180 yrzF BPUM_2418 - hypothetical protein 2383 31.86 -2 2429092..2429295 - 67 157693181 - BPUM_2419 - hypothetical protein 2384 38.78 0 2429472..2429618 + 48 157693182 - BPUM_2420 - hypothetical protein 2385 44.25 0 2429642..2431399 - 585 157693183 thiC BPUM_2421 - thiamine biosynthesis protein ThiC 2386 39.97 0 2431874..2432506 + 210 157693184 - BPUM_2422 - homoserine/threonine resistance transporter 2387 43.51 0 2432555..2433232 - 225 157693185 coxA BPUM_2423 - spore cortex protein CoxA 2388 42.73 0 2433306..2434550 - 414 157693186 safA BPUM_2424 - SpoVID-associated morphogenetic protein 2389 43.42 0 2434682..2435791 - 369 157693187 nadA BPUM_2425 - quinolinate synthetase 2390 43.29 0 2435778..2436641 - 287 157693188 nadC BPUM_2426 - nicotinate-nucleotide pyrophosphorylase 2391 44.32 0 2436623..2438197 - 524 157693189 nadB BPUM_2427 - L-aspartate oxidase 2392 44.01 0 2439434..2439976 + 180 157693190 yrxA BPUM_2429 - hypothetical protein 2393 42.55 0 2440203..2441081 - 292 157693191 pheA BPUM_2430 - prephenate dehydratase 2394 41.89 0 2441100..2441543 - 147 157693192 pheB BPUM_2431 - hypothetical protein 2395 46.46 +1 2441599..2442885 - 428 157693193 obg BPUM_2432 - GTPase ObgE 2396 35.73 -1 2442916..2443500 - 194 157693194 spo0B BPUM_2433 - stage 0 sporulation initiation phosphotransferase B 2397 43.86 0 2443756..2444040 - 94 157693195 rpmA BPUM_2434 - 50S ribosomal protein L27 2398 41.49 0 2444053..2444334 - 93 157693196 ysxB BPUM_2435 - hypothetical protein 2399 38.19 0 2444406..2444714 - 102 157693197 rplU BPUM_2436 - 50S ribosomal protein L21 2400 45.17 +1 2444866..2445735 - 289 157693198 spoIVFB BPUM_2437 - stage IV sporulation M50 family membrane metalloprotease FB 2401 43.43 0 2445728..2446519 - 263 157693199 spoIVFA BPUM_2438 - stage IV sporulation protein FA 2402 41.79 0 2446632..2447435 - 267 157693200 minD BPUM_2439 - septum site determining protein 2403 40.79 0 2447438..2448121 - 227 157693201 minC BPUM_2440 - septum formation inhibitor 2404 38.15 0 2448176..2448694 - 172 157693202 mreD BPUM_2441 - cell-shape determining protein 2405 40.67 0 2448691..2449590 - 299 157693203 mreC BPUM_2442 - cell-shape determining protein 2406 44.71 0 2449618..2450637 - 339 157693204 mreB BPUM_2443 - cell-shape determining protein 2407 41.63 0 2450728..2451426 - 232 157693205 radC BPUM_2444 - DNA repair protein RadC 2408 39.30 0 2451451..2452020 - 189 157693206 maf BPUM_2445 - Maf-like protein 2409 42.90 0 2452198..2453211 - 337 157693207 spoIIB BPUM_2446 - stage II sporulation protein B 2410 42.22 0 2453386..2454105 - 239 157693208 - BPUM_2447 - A24 unassigned peptidase family protein 2411 41.46 0 2454253..2455557 - 434 157693209 folC BPUM_2448 - tetrahydrofolate synthase 2412 43.78 0 2455623..2458265 - 880 157693210 valS BPUM_2449 - valyl-tRNA synthetase 2413 43.92 0 2458723..2458911 + 62 157693211 - BPUM_2450 - hypothetical protein 2414 43.41 0 2458958..2459989 - 343 157693212 ysxE BPUM_2451 - hypothetical protein 2415 43.35 0 2460027..2461304 - 425 157693213 spoVID BPUM_2452 - spore coat assembly protein SpoVID 2416 45.24 +1 2461627..2462919 - 430 157693214 hemL BPUM_2453 - glutamate-1-semialdehyde aminotransferase 2417 41.98 0 2462947..2463918 - 323 157693215 hemB BPUM_2454 - delta-aminolevulinic acid dehydratase 2418 43.94 0 2463915..2464706 - 263 157693216 hemD BPUM_2455 - uroporphyrinogen III synthase 2419 44.02 0 2464703..2465638 - 311 157693217 hemC BPUM_2456 - porphobilinogen deaminase 2420 38.39 0 2465680..2466510 - 276 157693218 hemX BPUM_2457 - cytochrome C biogenesis protein 2421 42.40 0 2466518..2467885 - 455 157693219 hemA BPUM_2458 - glutamyl-tRNA reductase 2422 39.92 0 2468128..2468613 + 161 157693220 ysxD BPUM_2459 - hypothetical protein 2423 41.67 0 2468657..2469244 - 195 157693221 ysxC BPUM_2460 - GTPase EngB 2424 42.80 0 2469241..2471565 - 774 157693222 lonA BPUM_2461 - class III heat-shock ATP-dependent Lon protease 2425 46.27 +1 2471737..2473398 - 553 157693223 lonB BPUM_2462 - ATP-dependent protease 2426 40.84 0 2473535..2474800 - 421 157693224 clpX BPUM_2463 - ATP-dependent protease ATP-binding subunit 2427 40.31 0 2475052..2476326 - 424 157693225 tig BPUM_2464 - trigger factor 2428 41.47 0 2476566..2477573 - 335 157693226 ysoA BPUM_2465 - hypothetical protein 2429 41.33 0 2477699..2478298 - 199 157693227 leuD BPUM_2466 - isopropylmalate isomerase small subunit 2430 45.13 +1 2478312..2479727 - 471 157693228 leuC BPUM_2467 - isopropylmalate isomerase large subunit 2431 44.81 +1 2479768..2480865 - 365 157693229 leuB BPUM_2468 - 3-isopropylmalate dehydrogenase 2432 42.28 0 2480884..2482437 - 517 157693230 leuA BPUM_2469 - 2-isopropylmalate synthase 2433 41.79 0 2482424..2483452 - 342 157693231 ilvC BPUM_2470 - ketol-acid reductoisomerase 2434 40.46 0 2483471..2483989 - 172 157693232 ilvH BPUM_2471 - acetolactate synthase 3 regulatory subunit 2435 45.22 +1 2483986..2485710 - 574 157693233 ilvB BPUM_2472 - acetolactate synthase catalytic subunit 2436 42.95 0 2486088..2487002 - 304 157693234 - BPUM_2473 - branched-chain amino acid aminotransferase 2437 43.49 0 2487437..2488480 + 347 157693235 - BPUM_2474 - 6-phosphogluconolactonase 2438 39.52 0 2488711..2489130 - 139 157693236 - BPUM_2475 - hypothetical protein 2439 38.82 0 2489226..2490392 - 388 157693237 dltD BPUM_2476 - D-alanine esterase DltD 2440 38.82 0 2490392..2490628 - 78 157693238 dltC BPUM_2477 - D-alanine--poly(phosphoribitol) ligase subunit 2 2441 39.41 0 2490650..2491834 - 394 157693239 dltB BPUM_2478 - D-alanine esterase DltB 2442 44.49 0 2491831..2493336 - 501 157693240 dltA BPUM_2479 - D-alanine--D-alanyl carrier protein ligase 2443 27.08 -2 2493351..2493494 - 47 157693241 - BPUM_2480 - D-Ala-teichoic acid biosynthesis protein 2444 39.65 0 2493834..2494229 + 131 157693242 - BPUM_2481 - glyoxalase 2445 37.22 -1 2494460..2494639 - 59 157693243 - BPUM_2482 - hypothetical protein 2446 33.33 -2 2494814..2495002 + 62 157693244 - BPUM_2483 - hypothetical protein 2447 36.77 -1 2495174..2496715 + 513 157693245 - BPUM_2484 - transposase 2448 31.85 -2 2496741..2497076 + 111 157693246 - BPUM_2485 - hypothetical protein 2449 36.36 -1 2497413..2497610 + 65 157693247 - BPUM_2487 - hypothetical protein 2450 40.88 0 2497974..2498954 + 326 157693248 - BPUM_2488 - dehydrogenase 2451 47.24 +1 2499582..2500106 - 174 157693249 ysnB BPUM_2489 - phosphoesterase 2452 44.61 0 2500121..2500714 - 197 157693250 ysnA BPUM_2490 - HAM1 protein 2453 43.76 0 2500734..2501462 - 242 157693251 rph BPUM_2491 - ribonuclease PH 2454 40.87 0 2501614..2502675 - 353 157693252 gerM BPUM_2492 - spore germination protein M 2455 43.71 0 2502777..2503595 - 272 157693253 racE BPUM_2493 - glutamate racemase 2456 40.82 0 2503603..2504043 - 146 157693254 ysmB BPUM_2494 - MarR family transcriptional regulator 2457 42.22 0 2504192..2504416 - 74 157693255 gerE BPUM_2495 - spore germination protein E 2458 44.04 0 2504622..2505938 - 438 157693256 - BPUM_2496 - CitMHS family citrate-magnesium (Mg2+):proton (H+) citrate-calcium (Ca2+): proton (H+) symporter 2459 40.53 0 2506091..2506951 - 286 157693257 yraN BPUM_2497 - LysR family transcriptional regulator 2460 44.56 0 2507087..2508217 + 376 157693258 yraM BPUM_2498 - hypothetical protein 2461 45.28 +1 2508245..2508964 - 239 157693259 - BPUM_2499 - biotin-(acetyl-CoA carboxylase) ligase 2462 43.51 0 2509043..2509504 - 153 157693260 ysmA BPUM_2500 - thioesterase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0