version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2311 42.58 0 2353774..2354487 + 237 157693109 - BPUM_2345 - amino acid ABC transporter ATP-binding protein 2312 42.84 0 2354524..2355354 - 276 157693110 yjqC BPUM_2346 - sporulation related manganese (Mn) catalase 2313 40.35 0 2355483..2356523 - 346 157693111 ydjL BPUM_2347 - zinc (Zn) alcohol dehydrogenase 2314 41.85 0 2356595..2357815 - 406 157693112 - BPUM_2348 - major facilitator transporter 2315 42.53 0 2358188..2358937 - 249 157693113 - BPUM_2349 - short chain dehydrogenase/reductase 2316 39.95 0 2359067..2360230 - 387 157693114 dhaT BPUM_2350 - 1,3-propanediol dehydrogenase 2317 37.40 -1 2360227..2361678 - 483 157693115 - BPUM_2351 - AGCS family alanine or glycine:sodium (Na+) or proton (H+) symporter 2318 37.14 -1 2361818..2362711 + 297 157693116 ywqM BPUM_2352 - LysR family transcriptional regulator 2319 41.71 0 2363168..2364886 - 572 157693117 - BPUM_2353 - multidrug ABC transporter ATP-binding protein 2320 42.73 0 2364886..2365449 - 187 157693118 - BPUM_2354 - hypothetical protein 2321 46.67 +1 2366166..2367380 - 404 157693119 yycR BPUM_2355 - zinc (Zn) alcohol dehydrogenase 2322 36.65 -1 2367801..2368403 - 200 157693120 yrhH BPUM_2356 - methyltransferase 2323 51.59 +2 2368671..2368796 + 41 157693121 - BPUM_2357 - hypothetical protein 2324 28.89 -2 2369162..2369296 - 44 157693122 yrzI BPUM_2358 - hypothetical protein 2325 37.08 -1 2369743..2369982 - 79 157693123 yrhC BPUM_2359 - hypothetical protein 2326 43.86 0 2370046..2371194 - 382 157693124 yrhB BPUM_2360 - cystathionine beta-lyase 2327 44.81 +1 2371196..2372119 - 307 157693125 yrhA BPUM_2361 - cysteine synthase 2328 41.81 0 2372166..2372861 - 231 157693126 mtnN BPUM_2362 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2329 41.28 0 2372877..2373518 - 213 157693127 yrrT BPUM_2363 - S-adenosylmethionine(SAM)-dependent methyltransferase 2330 34.62 -1 2373675..2373908 + 77 157693128 yrzA BPUM_2364 - hypothetical protein 2331 40.24 0 2373944..2374609 - 221 157693129 yrrS BPUM_2365 - hypothetical protein 2332 42.34 0 2374677..2376419 - 580 157693130 - BPUM_2366 - penicillin-binding protein 2333 38.19 0 2376470..2376943 - 157 157693131 greA BPUM_2367 - transcription elongation factor GreA 2334 38.05 0 2377652..2379007 + 451 157693132 - BPUM_2368 - transposase 2335 40.92 0 2379124..2379756 - 210 157693133 udk BPUM_2369 - uridine kinase 2336 43.18 0 2379764..2381032 - 422 157693134 yrrO BPUM_2370 - U32 family peptidase 2337 41.61 0 2381053..2381982 - 309 157693135 yrrN BPUM_2371 - U32 family peptidase 2338 39.19 0 2381979..2382644 - 221 157693136 yrrM BPUM_2372 - O-methyltransferase 2339 39.80 0 2382855..2383937 - 360 157693137 yrrL BPUM_2373 - aminodeoxychorismate lyase 2340 47.38 +1 2384011..2385099 - 362 157693138 yhfS BPUM_2374 - acetyl-CoA acetyltransferase 2341 42.62 0 2385087..2386550 - 487 157693139 yhfT BPUM_2375 - acyl-CoA synthetase 2342 44.97 +1 2386547..2387113 - 188 157693140 yhfU BPUM_2376 - hypothetical protein 2343 36.46 -1 2387268..2387555 - 95 157693141 yrzB BPUM_2377 - hypothetical protein 2344 44.36 0 2387572..2387988 - 138 157693142 yrrK BPUM_2378 - Holliday junction resolvase-like protein 2345 39.43 0 2387992..2388270 - 92 157693143 yrzL BPUM_2379 - hypothetical protein 2346 43.27 0 2388349..2390985 - 878 157693144 alaS BPUM_2380 - alanyl-tRNA synthetase 2347 44.88 +1 2391322..2392386 - 354 157693145 yrrI BPUM_2381 - hypothetical protein 2348 44.44 0 2392552..2393280 + 242 157693146 glnQ1 BPUM_2382 - glutamine ABC transporter ATP-binding protein 2349 38.15 0 2393294..2394103 + 269 157693147 glnH BPUM_2383 - glutamine ABC transporter binding protein 2350 42.05 0 2394171..2394824 + 217 157693148 glnM BPUM_2384 - glutamine ABC transporter membrane protein 2351 40.86 0 2394840..2395490 + 216 157693149 glnP BPUM_2385 - glutamine ABC transporter membrane protein 2352 40.91 0 2395724..2395855 - 43 157693150 - BPUM_2386 - hypothetical protein 2353 35.94 -1 2395876..2396067 - 63 157693151 - BPUM_2387 - hypothetical protein 2354 44.12 0 2396081..2396599 - 172 157693152 yrrD BPUM_2388 - hypothetical protein 2355 43.98 0 2396675..2399059 - 794 157693153 recD BPUM_2389 - exodeoxyribonuclease V alpha subunit 2356 42.35 0 2399079..2399732 - 217 157693154 yrrB BPUM_2390 - TPR repeat-containing protein 2357 43.52 0 2399793..2400911 - 372 157693155 trmU BPUM_2391 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2358 43.57 0 2401007..2402149 - 380 157693156 yrvO BPUM_2392 - bifunctional protein cysteine desulfurase/selenocysteine lyase 2359 40.24 0 2402168..2402587 - 139 157693157 yrzC BPUM_2393 - transcriptional regulator 2360 44.63 0 2402797..2404062 + 421 157693158 yrvN BPUM_2394 - recombination factor protein RarA 2361 40.92 0 2404292..2405056 - 254 157693159 yrvM BPUM_2395 - ThiF/MoeB/HesA family protein 2362 43.36 0 2405407..2407191 - 594 157693160 aspS BPUM_2396 - aspartyl-tRNA synthetase 2363 44.44 0 2408851..2409021 - 56 157693161 - BPUM_2398 - hypothetical protein 2364 45.13 +1 2409231..2410739 + 502 157693162 blyA BPUM_2399 - N-acetylmuramoyl-L-alanine amidase 2365 42.57 0 2410836..2411279 - 147 157693163 - BPUM_2400 - D-tyrosyl-tRNA deacylase 2366 42.51 0 2411298..2413508 - 736 157693164 relA BPUM_2401 - GTP diphosphokinase 2367 42.88 0 2413651..2414163 - 170 157693165 apt BPUM_2402 - adenine phosphoribosyltransferase 2368 42.80 0 2414187..2416511 - 774 157693166 recJ BPUM_2403 - recombination protein J 2369 40.96 0 2416593..2416946 - 117 157693167 yrvD BPUM_2404 - hypothetical protein 2370 41.32 0 2417472..2419700 - 742 157693168 secDF BPUM_2406 - bifunctional preprotein translocase subunit SecD/SecF 2371 34.34 -1 2419742..2420038 - 98 157693169 yrzD BPUM_2407 - hypothetical protein 2372 44.85 +1 2420142..2421704 + 520 157693170 spoVB BPUM_2408 - stage V sporulation protein B 2373 37.71 0 2421706..2422368 - 220 157693171 yrbG BPUM_2409 - hypothetical protein 2374 41.27 0 2422534..2422911 + 125 157693172 yrzE BPUM_2410 - hypothetical protein 2375 38.95 0 2422963..2423229 - 88 157693173 yajC BPUM_2411 - preprotein translocase subunit YajC 2376 43.37 0 2423277..2424422 - 381 157693174 tgt BPUM_2412 - queuine tRNA-ribosyltransferase 2377 43.54 0 2424453..2425481 - 342 157693175 queA BPUM_2413 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2378 37.31 -1 2425516..2425716 - 66 157693176 - BPUM_2414 - hypothetical protein 2379 46.17 +1 2425709..2426713 - 334 157693177 ruvB BPUM_2415 - Holliday junction DNA helicase B 2380 40.76 0 2426725..2427330 - 201 157693178 ruvA BPUM_2416 - Holliday junction DNA helicase motor protein 2381 41.13 0 2427479..2427991 - 170 157693179 bofC BPUM_2417 - bypass-of-forespore protein C 2382 40.16 0 2428217..2428861 + 214 157693180 yrzF BPUM_2418 - hypothetical protein 2383 31.86 -2 2429092..2429295 - 67 157693181 - BPUM_2419 - hypothetical protein 2384 38.78 0 2429472..2429618 + 48 157693182 - BPUM_2420 - hypothetical protein 2385 44.25 0 2429642..2431399 - 585 157693183 thiC BPUM_2421 - thiamine biosynthesis protein ThiC 2386 39.97 0 2431874..2432506 + 210 157693184 - BPUM_2422 - homoserine/threonine resistance transporter 2387 43.51 0 2432555..2433232 - 225 157693185 coxA BPUM_2423 - spore cortex protein CoxA 2388 42.73 0 2433306..2434550 - 414 157693186 safA BPUM_2424 - SpoVID-associated morphogenetic protein 2389 43.42 0 2434682..2435791 - 369 157693187 nadA BPUM_2425 - quinolinate synthetase 2390 43.29 0 2435778..2436641 - 287 157693188 nadC BPUM_2426 - nicotinate-nucleotide pyrophosphorylase 2391 44.32 0 2436623..2438197 - 524 157693189 nadB BPUM_2427 - L-aspartate oxidase 2392 44.01 0 2439434..2439976 + 180 157693190 yrxA BPUM_2429 - hypothetical protein 2393 42.55 0 2440203..2441081 - 292 157693191 pheA BPUM_2430 - prephenate dehydratase 2394 41.89 0 2441100..2441543 - 147 157693192 pheB BPUM_2431 - hypothetical protein 2395 46.46 +1 2441599..2442885 - 428 157693193 obg BPUM_2432 - GTPase ObgE 2396 35.73 -1 2442916..2443500 - 194 157693194 spo0B BPUM_2433 - stage 0 sporulation initiation phosphotransferase B 2397 43.86 0 2443756..2444040 - 94 157693195 rpmA BPUM_2434 - 50S ribosomal protein L27 2398 41.49 0 2444053..2444334 - 93 157693196 ysxB BPUM_2435 - hypothetical protein 2399 38.19 0 2444406..2444714 - 102 157693197 rplU BPUM_2436 - 50S ribosomal protein L21 2400 45.17 +1 2444866..2445735 - 289 157693198 spoIVFB BPUM_2437 - stage IV sporulation M50 family membrane metalloprotease FB 2401 43.43 0 2445728..2446519 - 263 157693199 spoIVFA BPUM_2438 - stage IV sporulation protein FA 2402 41.79 0 2446632..2447435 - 267 157693200 minD BPUM_2439 - septum site determining protein 2403 40.79 0 2447438..2448121 - 227 157693201 minC BPUM_2440 - septum formation inhibitor 2404 38.15 0 2448176..2448694 - 172 157693202 mreD BPUM_2441 - cell-shape determining protein 2405 40.67 0 2448691..2449590 - 299 157693203 mreC BPUM_2442 - cell-shape determining protein 2406 44.71 0 2449618..2450637 - 339 157693204 mreB BPUM_2443 - cell-shape determining protein 2407 41.63 0 2450728..2451426 - 232 157693205 radC BPUM_2444 - DNA repair protein RadC 2408 39.30 0 2451451..2452020 - 189 157693206 maf BPUM_2445 - Maf-like protein 2409 42.90 0 2452198..2453211 - 337 157693207 spoIIB BPUM_2446 - stage II sporulation protein B 2410 42.22 0 2453386..2454105 - 239 157693208 - BPUM_2447 - A24 unassigned peptidase family protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.