version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2226 39.57 0 2271765..2272502 - 245 157693024 yqzB BPUM_2257 - transcriptional regulator 2227 41.94 0 2272570..2274615 - 681 157693025 glyS BPUM_2258 - glycyl-tRNA synthetase subunit beta 2228 42.91 0 2274608..2275495 - 295 157693026 glyQ BPUM_2259 - glycyl-tRNA synthetase subunit alpha 2229 40.34 0 2275825..2276595 - 256 157693027 recO BPUM_2260 - DNA repair protein RecO 2230 36.11 -1 2276631..2276774 - 47 157693028 - BPUM_2261 - hypothetical protein 2231 40.07 0 2276924..2277829 - 301 157693029 era BPUM_2262 - GTP-binding protein Era 2232 41.85 0 2277822..2278220 - 132 157693030 cdd BPUM_2263 - cytidine deaminase 2233 41.25 0 2278698..2279177 - 159 157693031 yqfG BPUM_2264 - putative metalloprotease 2234 40.40 0 2279178..2281370 - 730 157693032 yqfF BPUM_2265 - HD family hydrolase 2235 41.77 0 2281404..2282363 - 319 157693033 phoH2 BPUM_2266 - phosphate starvation-induced protein 2236 40.55 0 2282367..2283557 - 396 157693034 yqfD BPUM_2267 - stage IV sporulation protein 2237 37.94 0 2283576..2283857 - 93 157693035 yqfC BPUM_2268 - sporulation protein YqfC 2238 29.62 -2 2284074..2285123 - 349 157693036 - BPUM_2269 - hypothetical protein 2239 43.25 0 2285180..2285653 - 157 157693037 yqfB BPUM_2270 - hypothetical protein 2240 43.61 0 2285685..2286677 - 330 157693038 yqfA BPUM_2271 - hypothetical protein 2241 42.39 0 2286705..2288018 - 437 157693039 yqeZ BPUM_2272 - serine peptidase 2242 40.00 0 2288160..2288609 - 149 157693040 yqeY BPUM_2273 - hypothetical protein 2243 38.51 0 2288624..2288797 - 57 157693041 rpsU BPUM_2274 - 30S ribosomal protein S21 2244 40.65 0 2288980..2289909 + 309 157693042 yqeW BPUM_2275 - PnaS family phosphate:sodium (Na+) symporter 2245 41.41 0 2289950..2291311 - 453 157693043 miaB BPUM_2276 - 2-methylthioadenine synthetase 2246 43.06 0 2291308..2292078 - 256 157693044 yqeU BPUM_2277 - hypothetical protein 2247 41.67 0 2292102..2293037 - 311 157693045 prmA BPUM_2278 - ribosomal protein L11 methyltransferase 2248 44.89 +1 2293060..2294193 - 377 157693046 dnaJ BPUM_2279 - chaperone DnaJ 2249 41.86 0 2294359..2296200 - 613 157693047 dnaK BPUM_2280 - chaperone DnaK 2250 40.86 0 2296225..2296782 - 185 157693048 grpE BPUM_2281 - chaperone GrpE 2251 40.99 0 2296846..2297877 - 343 157693049 hrcA BPUM_2282 - heat-inducible transcription repressor 2252 41.75 0 2297959..2299098 - 379 157693050 hemN BPUM_2283 - coproporphyrinogen III oxidase 2253 43.07 0 2299216..2301054 - 612 157693051 lepA BPUM_2284 - GTP-binding protein LepA 2254 40.84 0 2301186..2301518 - 110 157693052 yqeP BPUM_2285 - hypothetical protein 2255 42.02 0 2301533..2302741 - 402 157693053 spoIIP BPUM_2286 - stage II sporulation protein P 2256 44.53 0 2302808..2303923 - 371 157693054 gpr BPUM_2287 - germination protease 2257 41.95 0 2304122..2304388 + 88 157693055 rpsT BPUM_2288 - 30S ribosomal protein S20 2258 39.61 0 2304524..2305543 - 339 157693056 holA BPUM_2289 - DNA polymerase III subunit delta 2259 37.04 -1 2305780..2305914 + 44 157693057 - BPUM_2290 - hypothetical protein 2260 40.59 0 2305954..2308281 - 775 157693058 comEC BPUM_2291 - competence protein EC 2261 40.88 0 2308274..2308843 - 189 157693059 comEB BPUM_2292 - dCMP deaminase 2262 42.38 0 2308909..2309538 - 209 157693060 comEA BPUM_2293 - competence protein EA 2263 42.05 0 2309629..2310477 + 282 157693061 comER BPUM_2294 - late competence protein ComER 2264 41.26 0 2310525..2311268 - 247 157693062 yqeM BPUM_2295 - SAM dependent methyltransferase 2265 42.30 0 2311265..2311621 - 118 157693063 - BPUM_2296 - hypothetical protein 2266 40.96 0 2311634..2312197 - 187 157693064 yqeK BPUM_2297 - hypothetical protein 2267 42.28 0 2312187..2312756 - 189 157693065 nadD BPUM_2298 - nicotinic acid mononucleotide adenylyltransferase 2268 37.46 0 2312770..2313060 - 96 157693066 yqeI BPUM_2299 - RNA binding protein 2269 43.53 0 2313054..2313896 - 280 157693067 aroD BPUM_2300 - shikimate 5-dehydrogenase 2270 41.69 0 2313918..2315018 - 366 157693068 yqeH BPUM_2301 - GTP-binding protein YqeH 2271 42.17 0 2315021..2315371 - 116 157693069 yqeG BPUM_2302 - HAD family phosphatase 2272 33.99 -1 2315490..2315642 + 50 157693070 - BPUM_2303 - hypothetical protein 2273 34.75 -1 2315905..2316045 + 46 157693071 sda BPUM_2304 - sporulation inhibitor Sda 2274 47.33 +1 2316181..2316330 - 49 157693072 - BPUM_2305 - hypothetical protein 2275 43.21 0 2316409..2317137 - 242 157693073 yqeF BPUM_2306 - lipoprotein 2276 44.62 0 2317220..2317981 - 253 157693074 - BPUM_2307 - polysaccharide deacetylase 2277 38.70 0 2318137..2319348 - 403 157693075 rapA4 BPUM_2308 - aspartate phosphatase response regulator 2278 44.48 0 2319349..2320218 + 289 157693076 spoIIIC BPUM_2309 - sporulation sigma factor SigK 2279 38.05 0 2320335..2321690 + 451 157693077 - BPUM_2310 - transposase 2280 31.59 -2 2321873..2322388 - 171 157693078 - BPUM_2312 - hypothetical protein 2281 35.29 -1 2322788..2322991 + 67 157693079 - BPUM_2313 - hypothetical protein 2282 31.36 -2 2323091..2323750 + 219 157693080 - BPUM_2314 - lipoprotein 2283 32.14 -2 2324275..2324526 - 83 157693081 - BPUM_2316 - hypothetical protein 2284 39.09 0 2324581..2324997 - 138 157693082 - BPUM_2317 - hypothetical protein 2285 38.54 0 2325786..2325977 - 63 157693083 - BPUM_2319 - hypothetical protein 2286 39.74 0 2326084..2327487 - 467 157693084 yjeA BPUM_2320 - polysaccharide deacetylase 2287 42.34 0 2327656..2328210 - 184 157693085 - BPUM_2321 - hypothetical protein 2288 43.41 0 2328227..2328643 - 138 157693086 - BPUM_2322 - GNAT family acetyltransferase 2289 40.62 0 2328847..2329134 - 95 157693087 - BPUM_2323 - hypothetical protein 2290 39.65 0 2329281..2329565 + 94 157693088 - BPUM_2324 - hypothetical protein 2291 45.50 +1 2329545..2329733 - 62 157693089 - BPUM_2325 - hypothetical protein 2292 45.41 +1 2329807..2331147 - 446 157693090 - BPUM_2326 - major facilitator transporter 2293 44.37 0 2331229..2332650 - 473 157693091 araA BPUM_2327 - L-arabinose isomerase 2294 43.40 0 2332668..2333372 - 234 157693092 araD BPUM_2328 - L-ribulose-5-phosphate 4-epimerase 2295 45.08 +1 2333366..2334991 - 541 157693093 - BPUM_2329 - xylulokinase 2296 41.05 0 2335265..2336365 + 366 157693094 - BPUM_2330 - transcriptional regulator 2297 44.35 0 2336613..2337338 - 241 157693095 - BPUM_2331 - protein disulfide-isomerase 2298 45.16 +1 2337480..2338037 - 185 157693096 hxlB BPUM_2332 - 3-hexulose-6-phosphate isomerase 2299 43.60 0 2338034..2338666 - 210 157693097 hxlA BPUM_2333 - 3-hexulose-6-phosphate synthase 2300 41.74 0 2338917..2339273 - 118 157693098 hxlR BPUM_2334 - transcriptional regulator 2301 43.22 0 2339350..2340219 - 289 157693099 - BPUM_2335 - peptidase 2302 33.91 -1 2340466..2340813 - 115 157693100 yxiJ BPUM_2336 - hypothetical protein 2303 28.07 -2 2340984..2341154 - 56 157693101 - BPUM_2337 - hypothetical protein 2304 29.66 -2 2341348..2342001 - 217 157693102 - BPUM_2338 - hypothetical protein 2305 38.46 0 2342031..2349053 - 2340 157693103 wapA BPUM_2339 - cell wall-associated protein 2306 40.53 0 2349222..2350097 - 291 157693104 - BPUM_2340 - beta-lactamase 2307 44.24 0 2350137..2351300 - 387 157693105 ydbM BPUM_2341 - acyl-CoA dehydrogenase 2308 42.46 0 2351421..2352209 + 262 157693106 - BPUM_2342 - amino acid ABC transporter ATP-binding protein 2309 41.23 0 2352206..2353066 + 286 157693107 - BPUM_2343 - amino acid ABC transporter ATP-binding protein 2310 41.20 0 2353063..2353761 + 232 157693108 - BPUM_2344 - amino acid ABC transporter ATP-binding protein 2311 42.58 0 2353774..2354487 + 237 157693109 - BPUM_2345 - amino acid ABC transporter ATP-binding protein 2312 42.84 0 2354524..2355354 - 276 157693110 yjqC BPUM_2346 - sporulation related manganese (Mn) catalase 2313 40.35 0 2355483..2356523 - 346 157693111 ydjL BPUM_2347 - zinc (Zn) alcohol dehydrogenase 2314 41.85 0 2356595..2357815 - 406 157693112 - BPUM_2348 - major facilitator transporter 2315 42.53 0 2358188..2358937 - 249 157693113 - BPUM_2349 - short chain dehydrogenase/reductase 2316 39.95 0 2359067..2360230 - 387 157693114 dhaT BPUM_2350 - 1,3-propanediol dehydrogenase 2317 37.40 -1 2360227..2361678 - 483 157693115 - BPUM_2351 - AGCS family alanine or glycine:sodium (Na+) or proton (H+) symporter 2318 37.14 -1 2361818..2362711 + 297 157693116 ywqM BPUM_2352 - LysR family transcriptional regulator 2319 41.71 0 2363168..2364886 - 572 157693117 - BPUM_2353 - multidrug ABC transporter ATP-binding protein 2320 42.73 0 2364886..2365449 - 187 157693118 - BPUM_2354 - hypothetical protein 2321 46.67 +1 2366166..2367380 - 404 157693119 yycR BPUM_2355 - zinc (Zn) alcohol dehydrogenase 2322 36.65 -1 2367801..2368403 - 200 157693120 yrhH BPUM_2356 - methyltransferase 2323 51.59 +2 2368671..2368796 + 41 157693121 - BPUM_2357 - hypothetical protein 2324 28.89 -2 2369162..2369296 - 44 157693122 yrzI BPUM_2358 - hypothetical protein 2325 37.08 -1 2369743..2369982 - 79 157693123 yrhC BPUM_2359 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0