version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2170 37.42 -1 2223303..2223620 - 105 157692968 comGE BPUM_2201 - competence protein GE 2171 38.13 0 2223604..2223999 - 131 157692969 comGD BPUM_2202 - competence protein GD 2172 36.39 -1 2224043..2224336 - 97 157692970 comGC BPUM_2203 - competence protein GC 2173 40.25 0 2224353..2225393 - 346 157692971 comGB BPUM_2204 - competence protein GB 2174 40.43 0 2225374..2226444 - 356 157692972 comGA BPUM_2205 - competence protein GA 2175 41.01 0 2226622..2227494 - 290 157692973 yqhA BPUM_2206 - hypothetical protein 2176 34.65 -1 2227717..2228097 - 126 157692974 yqgZ BPUM_2207 - ArsC family transcription regulator 2177 38.27 0 2228311..2228553 + 80 157692975 yqgY BPUM_2208 - hypothetical protein 2178 41.86 0 2228600..2229244 - 214 157692976 yqgX BPUM_2209 - hypothetical protein 2179 40.91 0 2229372..2229569 + 65 157692977 yqgW BPUM_2210 - hypothetical protein 2180 38.73 0 2229794..2230108 - 104 157692978 yqgV BPUM_2211 - hypothetical protein 2181 40.62 0 2230187..2231641 - 484 157692979 yvqJ2 BPUM_2212 - major facilitator transporter 2182 42.58 0 2231598..2232722 - 374 157692980 yqgT BPUM_2213 - M14 family gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase 1 2183 36.82 -1 2232809..2234728 - 639 157692981 yqgS BPUM_2214 - phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase 2184 46.12 +1 2234942..2235895 - 317 157692982 glcK BPUM_2215 - glucokinase 2185 36.11 -1 2235909..2236124 - 71 157692983 yqgQ BPUM_2216 - hypothetical protein 2186 42.11 0 2236183..2237721 - 512 157692984 yqgP BPUM_2217 - peptidase 2187 35.59 -1 2237808..2237984 - 58 157692985 yqgO BPUM_2218 - hypothetical protein 2188 44.39 0 2238218..2238778 - 186 157692986 yqgN BPUM_2219 - 5-formyltetrahydrofolate cyclo-ligase 2189 35.33 -1 2238827..2238976 - 49 157692987 rpmGA BPUM_2220 - 50S ribosomal protein L33 2190 37.93 0 2239396..2239743 + 115 157692988 yqzD BPUM_2221 - hypothetical protein 2191 38.92 0 2239740..2240240 + 166 157692989 yqzC BPUM_2222 - hypothetical protein 2192 41.04 0 2240283..2241074 - 263 157692990 pstBB BPUM_2223 - phosphate ABC transporter ATP-binding protein 2193 41.94 0 2241080..2241892 - 270 157692991 pstBA BPUM_2224 - phosphate ABC transporter ATP-binding protein 2194 43.62 0 2241916..2242800 - 294 157692992 pstA BPUM_2225 - phosphate ABC transporter ATP-binding protein 2195 43.80 0 2242800..2243726 - 308 157692993 pstC BPUM_2226 - phosphate ABC transporter ATP-binding protein 2196 40.63 0 2243806..2244723 - 305 157692994 pstS BPUM_2227 - phosphate ABC transporter ATP-binding protein 2197 42.01 0 2244938..2247139 - 733 157692995 pbpA BPUM_2228 - penicillin-binding protein 2A 2198 42.04 0 2247196..2248482 - 428 157692996 yqgE BPUM_2229 - major facilitator superfamily sugar transporter 2199 43.19 0 2248605..2249213 - 202 157692997 sodA BPUM_2230 - manganese (Mn) superoxide dismutase SodA 2200 41.15 0 2249400..2249885 - 161 157692998 yqgC BPUM_2231 - hypothetical protein 2201 37.48 0 2250029..2250799 + 256 157692999 yqgB BPUM_2232 - hypothetical protein 2202 39.52 0 2250855..2251484 - 209 157693000 - BPUM_2233 - ribosomal-protein-alanine N-acetyltransferase 2203 40.59 0 2251590..2251892 + 100 157693001 yqfZ BPUM_2234 - hypothetical protein 2204 42.23 0 2251998..2253110 + 370 157693002 ispG BPUM_2235 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2205 44.90 +1 2253157..2253519 - 120 157693003 yqfX BPUM_2236 - hypothetical protein 2206 41.62 0 2253659..2254237 + 192 157693004 yqfW BPUM_2237 - hypothetical protein 2207 44.12 0 2254457..2255374 - 305 157693005 - BPUM_2238 - NagC/XylR family transcriptional regulator 2208 32.52 -2 2255596..2256210 - 204 157693006 - BPUM_2239 - internalin G 2209 31.48 -2 2256247..2256408 - 53 157693007 - BPUM_2240 - hypothetical protein 2210 37.30 -1 2256646..2257074 - 142 157693008 zur BPUM_2241 - Fur family transcriptional regulator Zur 2211 41.11 0 2257052..2257912 - 286 157693009 yceA BPUM_2242 - ABC transporter ATP-binding protein 2212 42.21 0 2257912..2258688 - 258 157693010 ycdI BPUM_2243 - iron ABC transporter permease 2213 37.32 -1 2258824..2259702 - 292 157693011 yqfU BPUM_2244 - hypothetical protein 2214 40.78 0 2259842..2260096 + 84 157693012 yqfT BPUM_2245 - hypothetical protein 2215 41.41 0 2260145..2261035 - 296 157693013 nfo BPUM_2246 - endonuclease IV 2216 39.47 0 2261049..2262368 - 439 157693014 yqfR BPUM_2247 - ATP-dependent RNA helicase 2217 50.00 +2 2262524..2263225 + 233 157693015 yqfQ BPUM_2248 - spore protein YqfQ 2218 44.55 0 2263383..2264327 + 314 157693016 yqfP BPUM_2249 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2219 41.00 0 2264366..2265487 - 373 157693017 yqfO BPUM_2250 - hypothetical protein 2220 42.96 0 2265480..2266196 - 238 157693018 yqfN BPUM_2251 - hypothetical protein 2221 44.79 +1 2266307..2266594 - 95 157693019 cccA BPUM_2252 - cytochrome c550 2222 42.69 0 2266970..2268091 - 373 157693020 sigA BPUM_2253 - RNA polymerase sigma factor RpoD 2223 41.80 0 2268293..2270122 - 609 157693021 dnaG BPUM_2254 - DNA primase 2224 40.12 0 2270156..2270656 - 166 157693022 yqxD BPUM_2255 - hypothetical protein 2225 41.85 0 2270918..2271739 - 273 157693023 yqfL BPUM_2256 - hypothetical protein 2226 39.57 0 2271765..2272502 - 245 157693024 yqzB BPUM_2257 - transcriptional regulator 2227 41.94 0 2272570..2274615 - 681 157693025 glyS BPUM_2258 - glycyl-tRNA synthetase subunit beta 2228 42.91 0 2274608..2275495 - 295 157693026 glyQ BPUM_2259 - glycyl-tRNA synthetase subunit alpha 2229 40.34 0 2275825..2276595 - 256 157693027 recO BPUM_2260 - DNA repair protein RecO 2230 36.11 -1 2276631..2276774 - 47 157693028 - BPUM_2261 - hypothetical protein 2231 40.07 0 2276924..2277829 - 301 157693029 era BPUM_2262 - GTP-binding protein Era 2232 41.85 0 2277822..2278220 - 132 157693030 cdd BPUM_2263 - cytidine deaminase 2233 41.25 0 2278698..2279177 - 159 157693031 yqfG BPUM_2264 - putative metalloprotease 2234 40.40 0 2279178..2281370 - 730 157693032 yqfF BPUM_2265 - HD family hydrolase 2235 41.77 0 2281404..2282363 - 319 157693033 phoH2 BPUM_2266 - phosphate starvation-induced protein 2236 40.55 0 2282367..2283557 - 396 157693034 yqfD BPUM_2267 - stage IV sporulation protein 2237 37.94 0 2283576..2283857 - 93 157693035 yqfC BPUM_2268 - sporulation protein YqfC 2238 29.62 -2 2284074..2285123 - 349 157693036 - BPUM_2269 - hypothetical protein 2239 43.25 0 2285180..2285653 - 157 157693037 yqfB BPUM_2270 - hypothetical protein 2240 43.61 0 2285685..2286677 - 330 157693038 yqfA BPUM_2271 - hypothetical protein 2241 42.39 0 2286705..2288018 - 437 157693039 yqeZ BPUM_2272 - serine peptidase 2242 40.00 0 2288160..2288609 - 149 157693040 yqeY BPUM_2273 - hypothetical protein 2243 38.51 0 2288624..2288797 - 57 157693041 rpsU BPUM_2274 - 30S ribosomal protein S21 2244 40.65 0 2288980..2289909 + 309 157693042 yqeW BPUM_2275 - PnaS family phosphate:sodium (Na+) symporter 2245 41.41 0 2289950..2291311 - 453 157693043 miaB BPUM_2276 - 2-methylthioadenine synthetase 2246 43.06 0 2291308..2292078 - 256 157693044 yqeU BPUM_2277 - hypothetical protein 2247 41.67 0 2292102..2293037 - 311 157693045 prmA BPUM_2278 - ribosomal protein L11 methyltransferase 2248 44.89 +1 2293060..2294193 - 377 157693046 dnaJ BPUM_2279 - chaperone DnaJ 2249 41.86 0 2294359..2296200 - 613 157693047 dnaK BPUM_2280 - chaperone DnaK 2250 40.86 0 2296225..2296782 - 185 157693048 grpE BPUM_2281 - chaperone GrpE 2251 40.99 0 2296846..2297877 - 343 157693049 hrcA BPUM_2282 - heat-inducible transcription repressor 2252 41.75 0 2297959..2299098 - 379 157693050 hemN BPUM_2283 - coproporphyrinogen III oxidase 2253 43.07 0 2299216..2301054 - 612 157693051 lepA BPUM_2284 - GTP-binding protein LepA 2254 40.84 0 2301186..2301518 - 110 157693052 yqeP BPUM_2285 - hypothetical protein 2255 42.02 0 2301533..2302741 - 402 157693053 spoIIP BPUM_2286 - stage II sporulation protein P 2256 44.53 0 2302808..2303923 - 371 157693054 gpr BPUM_2287 - germination protease 2257 41.95 0 2304122..2304388 + 88 157693055 rpsT BPUM_2288 - 30S ribosomal protein S20 2258 39.61 0 2304524..2305543 - 339 157693056 holA BPUM_2289 - DNA polymerase III subunit delta 2259 37.04 -1 2305780..2305914 + 44 157693057 - BPUM_2290 - hypothetical protein 2260 40.59 0 2305954..2308281 - 775 157693058 comEC BPUM_2291 - competence protein EC 2261 40.88 0 2308274..2308843 - 189 157693059 comEB BPUM_2292 - dCMP deaminase 2262 42.38 0 2308909..2309538 - 209 157693060 comEA BPUM_2293 - competence protein EA 2263 42.05 0 2309629..2310477 + 282 157693061 comER BPUM_2294 - late competence protein ComER 2264 41.26 0 2310525..2311268 - 247 157693062 yqeM BPUM_2295 - SAM dependent methyltransferase 2265 42.30 0 2311265..2311621 - 118 157693063 - BPUM_2296 - hypothetical protein 2266 40.96 0 2311634..2312197 - 187 157693064 yqeK BPUM_2297 - hypothetical protein 2267 42.28 0 2312187..2312756 - 189 157693065 nadD BPUM_2298 - nicotinic acid mononucleotide adenylyltransferase 2268 37.46 0 2312770..2313060 - 96 157693066 yqeI BPUM_2299 - RNA binding protein 2269 43.53 0 2313054..2313896 - 280 157693067 aroD BPUM_2300 - shikimate 5-dehydrogenase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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