version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2003 39.76 0 2077550..2078311 - 253 157692801 ypbE BPUM_2033 - hypothetical protein 2004 38.47 0 2078256..2078897 - 213 157692802 ypbD BPUM_2034 - hypothetical protein 2005 42.48 0 2078894..2080402 - 502 157692803 recQ BPUM_2035 - ATP-dependent helicase RecQ 2006 39.03 0 2080395..2081447 - 350 157692804 ypbB BPUM_2036 - hypothetical protein 2007 42.57 0 2081715..2081963 + 82 157692805 fer BPUM_2037 - ferredoxin 2008 37.63 0 2081998..2082579 - 193 157692806 ypaA BPUM_2038 - hypothetical protein 2009 40.83 0 2083143..2084717 + 524 157692807 serA BPUM_2039 - D-3-phosphoglycerate dehydrogenase 2010 44.81 +1 2084752..2085396 - 214 157692808 - BPUM_2040 - M23 family peptidase 2011 40.33 0 2085497..2086540 - 347 157692809 rsiX BPUM_2041 - sigma X negative regulator 2012 42.53 0 2086518..2087126 - 202 157692810 sigX BPUM_2042 - RNA polymerase sigma factor SigX 2013 38.57 0 2087237..2087446 - 69 157692811 - BPUM_2043 - hypothetical protein 2014 42.14 0 2087532..2089313 - 593 157692812 resE BPUM_2044 - sensor histidine kinase 2015 41.77 0 2089310..2090032 - 240 157692813 resD BPUM_2045 - response regulator 2016 42.66 0 2090120..2091298 - 392 157692814 resC BPUM_2046 - cytochrome c biogenesis protein ResC 2017 41.31 0 2091282..2092961 - 559 157692815 resB BPUM_2047 - cytochrome c biogenesis protein ResB 2018 40.49 0 2092963..2093493 - 176 157692816 resA BPUM_2048 - thiol-disulfide oxidoreductase 2019 40.43 0 2093584..2094429 - 281 157692817 rluB BPUM_2049 - pseudouridylate synthase 2020 45.62 +1 2094456..2094992 - 178 157692818 spmB BPUM_2050 - spore maturation protein B 2021 44.39 0 2094997..2095584 - 195 157692819 spmA BPUM_2051 - spore maturation protein A 2022 39.29 0 2095572..2096729 - 385 157692820 dacB BPUM_2052 - serine-type D-Ala-D-Ala carboxypeptidase 2023 40.83 0 2096835..2097314 - 159 157692821 ypuI BPUM_2053 - hypothetical protein 2024 41.75 0 2097428..2098021 - 197 157692822 scpB BPUM_2054 - segregation and condensation protein B 2025 38.08 0 2098011..2098769 - 252 157692823 scpA BPUM_2055 - segregation and condensation protein A 2026 47.31 +1 2098978..2099070 + 30 157692824 - BPUM_2056 - hypothetical protein 2027 42.29 0 2099158..2099682 + 174 157692825 ypuF BPUM_2057 - hypothetical protein 2028 41.81 0 2099707..2100060 - 117 157692826 ribT BPUM_2058 - reductase 2029 41.51 0 2100174..2100638 - 154 157692827 ribH BPUM_2059 - riboflavin synthase subunit beta 2030 44.18 0 2100666..2101292 - 208 157692828 ribA BPUM_2060 - bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase 2031 42.40 0 2101304..2101954 - 216 157692829 ribE BPUM_2061 - riboflavin synthase subunit alpha 2032 31.59 -2 2102455..2102799 - 114 157692830 ypuD BPUM_2062 - lipoprotein 2033 35.47 -1 2103024..2103257 - 77 157692831 - BPUM_2063 - hypothetical protein 2034 38.49 0 2103470..2104051 - 193 157692832 yezE BPUM_2064 - TetR family transcriptional regulator 2035 46.19 +1 2104292..2105551 + 419 157692833 - BPUM_2065 - major facilitator transporter 2036 43.15 0 2105596..2106033 - 145 157692834 ppiB BPUM_2066 - peptidylprolyl isomerase 2037 41.22 0 2106339..2107238 + 299 157692835 ypuA BPUM_2067 - hypothetical protein 2038 42.72 0 2107278..2108609 - 443 157692836 lysA BPUM_2068 - diaminopimelate decarboxylase 2039 41.68 0 2108719..2110191 - 490 157692837 spoVAF BPUM_2069 - stage V sporulation protein AF 2040 45.81 +1 2110145..2110753 - 202 157692838 spoVAEA BPUM_2070 - stage V sporulation protein AEA 2041 43.30 0 2110760..2111110 - 116 157692839 spoVAEB BPUM_2071 - stage V sporulation protein AEB 2042 44.84 +1 2111110..2112126 - 338 157692840 spoVAD BPUM_2072 - stage V sporulation protein AD 2043 42.60 0 2112139..2112591 - 150 157692841 spoVAC BPUM_2073 - stage V sporulation protein AC 2044 45.56 +1 2112611..2113027 - 138 157692842 spoVAB BPUM_2074 - stage V sporulation protein AB 2045 39.61 0 2113017..2113637 - 206 157692843 spoVAA BPUM_2075 - stage V sporulation protein AA 2046 40.89 0 2113752..2114519 - 255 157692844 sigF BPUM_2076 - sporulation sigma factor SigF 2047 42.63 0 2114533..2114973 - 146 157692845 spoIIAB BPUM_2077 - anti-sigma F factor 2048 41.24 0 2114970..2115323 - 117 157692846 spoIIAA BPUM_2078 - stage II sporulation anti-anti-sigma factor 2049 40.81 0 2115485..2116687 - 400 157692847 dacF BPUM_2079 - serine-type D-Ala-D-Ala carboxypeptidase 2050 43.30 0 2116797..2117609 - 270 157692848 punA BPUM_2080 - purine-nucleoside phosphorylase 2051 42.03 0 2117621..2118805 - 394 157692849 drm BPUM_2081 - phosphopentomutase 2052 41.30 0 2118957..2119847 - 296 157692850 xerD BPUM_2082 - site-specific tyrosine recombinase XerD 2053 36.29 -1 2119854..2120090 - 78 157692851 - BPUM_2083 - hypothetical protein 2054 40.40 0 2120199..2120651 - 150 157692852 fur BPUM_2084 - Fur family transcriptional regulator Fur 2055 37.81 0 2120770..2121417 - 215 157692853 spoIIM BPUM_2085 - stage II sporulation protein M 2056 37.39 -1 2122774..2122995 - 73 157692854 yqkK BPUM_2087 - hypothetical protein 2057 41.72 0 2123064..2123516 - 150 157692855 yybD BPUM_2088 - acetyltransferase 2058 44.42 0 2123503..2124684 - 393 157692856 yqxK BPUM_2089 - hypothetical protein 2059 40.14 0 2124681..2125238 - 185 157692857 nudF BPUM_2090 - ADP-ribose diphosphatase 2060 40.58 0 2125406..2126329 + 307 157692858 yqkF BPUM_2091 - Tas family dehydrogenase 2061 32.56 -2 2126487..2126876 - 129 157692859 - BPUM_2092 - hypothetical protein 2062 39.33 0 2127048..2127197 - 49 157692860 - BPUM_2093 - hypothetical protein 2063 40.67 0 2127249..2127398 + 49 157692861 - BPUM_2094 - hypothetical protein 2064 40.41 0 2127395..2128327 + 310 157692862 yqkD BPUM_2095 - serine peptidase 2065 39.11 0 2128354..2129616 - 420 157692863 rapA3 BPUM_2096 - aspartate phosphatase response regulator 2066 37.50 0 2129922..2130161 - 79 157692864 yqkC BPUM_2097 - hypothetical protein 2067 42.20 0 2130174..2130500 - 108 157692865 yqkB BPUM_2098 - hypothetical protein 2068 42.23 0 2130616..2131593 - 325 157692866 yqkA BPUM_2099 - hypothetical protein 2069 41.52 0 2131590..2132090 - 166 157692867 yqjY BPUM_2100 - hypothetical protein 2070 41.33 0 2132344..2132793 + 149 157692868 yfmQ BPUM_2101 - hypothetical protein 2071 46.15 +1 2132943..2134175 + 410 157692869 polY2 BPUM_2102 - DNA polymerase IV 2072 45.22 +1 2134191..2134535 + 114 157692870 - BPUM_2103 - hypothetical protein 2073 44.17 0 2134725..2135960 + 411 157692871 - BPUM_2104 - major facilitator superfamily sugar:cation symporter 2074 41.27 0 2135991..2136872 - 293 157692872 coaA BPUM_2105 - pantothenate kinase 2075 45.15 +1 2137137..2138465 + 442 157692873 - BPUM_2106 - NADH dehydrogenase 2076 44.14 0 2138531..2139307 - 258 157692874 yqjQ BPUM_2107 - dehydrogenase 2077 42.90 0 2139320..2140270 - 316 157692875 yqjP BPUM_2108 - zinc metallohydrolase 2078 43.60 0 2140693..2141520 + 275 157692876 proI BPUM_2109 - pyrroline-5-carboxylate reductase 2 2079 38.83 0 2141674..2141946 + 90 157692877 - BPUM_2110 - hypothetical protein 2080 42.13 0 2142101..2143714 - 537 157692878 yqjN BPUM_2111 - M20A subfamily peptidase 2081 46.12 +1 2143856..2144872 + 338 157692879 yqjM BPUM_2112 - NADPH dehydrogenase NamA 2082 44.18 0 2144993..2145757 + 254 157692880 yqjL BPUM_2113 - hydrolase 2083 42.13 0 2145803..2147110 - 435 157692881 - BPUM_2114 - aminotransferase 2084 42.37 0 2147250..2148179 - 309 157692882 rnz BPUM_2115 - ribonuclease Z 2085 41.80 0 2148402..2149877 + 491 157692883 zwf BPUM_2116 - glucose-6-phosphate 1-dehydrogenase 2086 42.19 0 2149924..2150646 - 240 157692884 ydhQ BPUM_2117 - transcriptional regulator 2087 41.51 0 2150800..2152206 - 468 157692885 ydhP BPUM_2118 - 6-phospho-beta-glucosidase 2088 40.53 0 2152190..2153536 - 448 157692886 ydhO BPUM_2119 - PTS family cellobiose porter component IIC 2089 42.64 0 2153562..2153894 - 110 157692887 ydhN BPUM_2120 - PTS family cellobiose porter component IIA 2090 43.27 0 2153898..2154209 - 103 157692888 ydhM BPUM_2121 - PTS family cellobiose porter component IIB 2091 45.55 +1 2154352..2155137 - 261 157692889 gdh BPUM_2122 - glucose-1-dehydrogenase 2092 44.88 +1 2155150..2155998 - 282 157692890 glcU BPUM_2123 - DMT superfamily drug/metabolite transporter 2093 41.56 0 2156116..2157525 - 469 157692891 yqjI BPUM_2124 - 6-phosphogluconate dehydrogenase 2094 43.37 0 2157624..2158868 - 414 157692892 polY1 BPUM_2125 - DNA polymerase IV 2095 39.68 0 2159014..2160021 - 335 157692893 cynD BPUM_2126 - cyanide dihydratase 2096 36.52 -1 2160187..2160468 + 93 157692894 yqzJ BPUM_2127 - hypothetical protein 2097 39.93 0 2160496..2161314 + 272 157692895 oxaA2 BPUM_2128 - OxaA-like protein precursor 2098 39.57 0 2161555..2162019 - 154 157692896 - BPUM_2129 - chemotaxis signal transduction protein 2099 44.47 0 2162034..2163155 - 373 157692897 yqjE BPUM_2130 - M20B subfamily peptidase 2100 45.85 +1 2163172..2164641 - 489 157692898 yqjD BPUM_2131 - propionyl-CoA carboxylase beta subunit 2101 41.84 0 2164628..2165050 - 140 157692899 yqjC BPUM_2132 - glyoxalase/bleomycin resistance protein/dioxygenase family protein 2102 39.22 0 2165042..2165245 + 67 157692900 - BPUM_2133 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0