version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1915 39.11 0 1997002..1998507 - 501 157692713 ypwA BPUM_1945 - M32 family carboxypeptidase 1916 40.71 0 1998635..2000572 - 645 157692714 ypvA BPUM_1946 - ATP-dependent helicase 1917 38.97 0 2000634..2000846 + 70 157692715 - BPUM_1947 - hypothetical protein 1918 39.20 0 2000974..2001774 - 266 157692716 - BPUM_1948 - integrase 1919 41.44 0 2001792..2002124 - 110 157692717 - BPUM_1949 - transposase 1920 43.72 0 2002240..2003394 - 384 157692718 - BPUM_1950 - site-specific DNA-methyltransferase (adenine-specific) 1921 33.66 -2 2003949..2004254 - 101 157692719 ypsB BPUM_1951 - hypothetical protein 1922 41.39 0 2004312..2004944 - 210 157692720 ypsA BPUM_1952 - hypothetical protein 1923 40.79 0 2005474..2006721 - 415 157692721 yprB BPUM_1953 - hypothetical protein 1924 43.35 0 2006745..2008991 - 748 157692722 yprA BPUM_1954 - ATP-dependent helicase 1925 44.35 0 2009236..2010270 + 344 157692723 yqiG BPUM_1955 - FMN reductase 1926 40.63 0 2010319..2010825 - 168 157692724 ypqE BPUM_1956 - PTS family glucose/sucrose porter component IIA 1927 41.90 0 2010994..2011413 + 139 157692725 - BPUM_1957 - hypothetical protein 1928 44.81 +1 2011434..2011886 - 150 157692726 yppG BPUM_1958 - hypothetical protein 1929 39.78 0 2011993..2012364 - 123 157692727 yppE BPUM_1959 - hypothetical protein 1930 41.43 0 2012436..2012756 + 106 157692728 - BPUM_1960 - hypothetical protein 1931 41.90 0 2012852..2012956 + 34 157692729 sspM BPUM_1961 - small acid-soluble spore protein M 1932 39.50 0 2012979..2013935 - 318 157692730 yppC BPUM_1962 - hypothetical protein 1933 40.13 0 2013982..2014599 + 205 157692731 recU BPUM_1963 - Holliday junction-specific endonuclease 1934 40.78 0 2014637..2017348 + 903 157692732 ponA BPUM_1964 - penicillin-binding proteins 1A and 1B 1935 37.84 0 2017383..2017892 - 169 157692733 ypoC BPUM_1965 - hypothetical protein 1936 42.99 0 2017889..2018551 - 220 157692734 nth BPUM_1966 - DNA-(apurinic or apyrimidinic site) lyase 1937 40.14 0 2018569..2019273 - 234 157692735 dnaD BPUM_1967 - DNA replication protein DnaD 1938 40.69 0 2019371..2020729 - 452 157692736 asnS BPUM_1968 - asparaginyl-tRNA synthetase 1939 38.48 0 2020779..2021264 - 161 157692737 ypmB BPUM_1969 - hypothetical protein 1940 33.33 -2 2021277..2021447 - 56 157692738 ypmA BPUM_1970 - hypothetical protein 1941 42.07 0 2021580..2024372 - 930 157692739 dinG BPUM_1971 - bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon 1942 39.58 0 2024486..2024869 - 127 157692740 panD BPUM_1972 - aspartate alpha-decarboxylase 1943 42.91 0 2024862..2025728 - 288 157692741 panC BPUM_1973 - pantoate--beta-alanine ligase 1944 42.02 0 2025725..2026564 - 279 157692742 panB BPUM_1974 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1945 43.70 0 2026762..2027745 - 327 157692743 birA BPUM_1975 - bifunctional transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase 1946 43.47 0 2027718..2028920 - 400 157692744 cca BPUM_1976 - tRNA CCA-pyrophosphorylase 1947 43.28 0 2028913..2030058 - 381 157692745 - BPUM_1977 - glycosyltransferase 1948 42.98 0 2030061..2030765 - 234 157692746 ypjG BPUM_1978 - hypothetical protein 1949 44.05 0 2030752..2031171 - 139 157692747 mgsA BPUM_1979 - methylglyoxal synthase 1950 42.41 0 2031189..2031992 - 267 157692748 dapB BPUM_1980 - dihydrodipicolinate reductase 1951 40.48 0 2031998..2032333 - 111 157692749 ypjD BPUM_1981 - pyrophosphatase 1952 41.92 0 2032471..2033343 + 290 157692750 ypjC BPUM_1982 - hypothetical protein 1953 41.04 0 2033374..2034177 - 267 157692751 ypjB BPUM_1983 - sporulation protein YpjB 1954 39.96 0 2034243..2034800 - 185 157692752 ypjA BPUM_1984 - hypothetical protein 1955 44.14 0 2034938..2035705 - 255 157692753 qcrC BPUM_1985 - menaquinol:cytochrome c dehydrogenase cytochrome b/c subunit 1956 42.52 0 2035748..2036422 - 224 157692754 qcrB BPUM_1986 - cytochrome b6 1957 46.15 +1 2036425..2036931 - 168 157692755 qcrA BPUM_1987 - menaquinol:cytochrome c dehydrogenase iron-sulfur subunit 1958 38.26 0 2037076..2037522 - 148 157692756 ypiF BPUM_1988 - hypothetical protein 1959 35.56 -1 2037584..2038123 - 179 157692757 ypiB BPUM_1989 - hypothetical protein 1960 38.88 0 2038199..2039497 - 432 157692758 ypiA BPUM_1990 - hypothetical protein 1961 40.95 0 2039762..2041048 - 428 157692759 aroE BPUM_1991 - 3-phosphoshikimate 1-carboxyvinyltransferase 1962 39.83 0 2041059..2042213 - 384 157692760 tyrA BPUM_1992 - prephenate dehydrogenase 1963 40.89 0 2042288..2043385 - 365 157692761 hisC BPUM_1993 - histidinol-phosphate aminotransferase 1964 39.80 0 2043396..2044199 - 267 157692762 trpA BPUM_1994 - tryptophan synthase subunit alpha 1965 44.17 0 2044196..2045395 - 399 157692763 trpB BPUM_1995 - tryptophan synthase subunit beta 1966 42.42 0 2045376..2046035 - 219 157692764 trpF BPUM_1996 - N-(5'-phosphoribosyl)anthranilate isomerase 1967 38.51 0 2046041..2046793 - 250 157692765 trpC BPUM_1997 - indole-3-glycerol-phosphate synthase 1968 43.60 0 2046786..2047808 - 340 157692766 trpD BPUM_1998 - anthranilate phosphoribosyltransferase 1969 41.28 0 2047780..2049327 - 515 157692767 trpE BPUM_1999 - anthranilate synthase component I 1970 42.71 0 2049560..2049943 - 127 157692768 aroH BPUM_2000 - chorismate mutase 1971 43.68 0 2049940..2051031 - 363 157692769 aroB BPUM_2001 - 3-dehydroquinate synthase 1972 44.67 0 2051031..2052203 - 390 157692770 aroF BPUM_2002 - chorismate synthase 1973 36.79 -1 2052277..2053056 - 259 157692771 cheR BPUM_2003 - protein-glutamate O-methyltransferase 1974 39.15 0 2053201..2053647 - 148 157692772 ndk BPUM_2004 - nucleoside diphosphate kinase 1975 40.39 0 2053778..2054740 - 320 157692773 hepT BPUM_2005 - heptaprenyl diphosphate synthase component II 1976 42.27 0 2054765..2055469 - 234 157692774 menH BPUM_2006 - ubiquinone/menaquinone biosynthesis methyltransferase 1977 38.15 0 2055473..2056240 - 255 157692775 hepS BPUM_2007 - trans-hexaprenyltranstransferase subunit 1 1978 40.80 0 2056355..2056555 - 66 157692776 mtrB BPUM_2008 - transcription attenuation protein MtrB 1979 42.81 0 2056610..2057179 - 189 157692777 folE BPUM_2009 - GTP cyclohydrolase I 1980 40.50 0 2057370..2057648 - 92 157692778 hbs BPUM_2010 - non-specific DNA-binding protein HBsu 1981 43.34 0 2058023..2059501 - 492 157692779 spoIVA BPUM_2011 - spore cortex-coat assembly protein 1982 40.50 0 2059706..2060431 - 241 157692780 yphF BPUM_2012 - hypothetical protein 1983 39.22 0 2060449..2060652 - 67 157692781 yphE BPUM_2013 - hypothetical protein 1984 45.09 +1 2060918..2061955 - 345 157692782 gpsA BPUM_2014 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1985 41.27 0 2061970..2063280 - 436 157692783 yphC BPUM_2015 - GTP-binding protein EngA 1986 38.97 0 2063440..2063634 - 64 157692784 - BPUM_2016 - hypothetical protein 1987 42.03 0 2063641..2064525 - 294 157692785 seaA BPUM_2017 - spore envelope protein 1988 39.97 0 2064522..2065124 - 200 157692786 yphA BPUM_2018 - hypothetical protein 1989 40.00 0 2065197..2065376 + 59 157692787 - BPUM_2019 - hypothetical protein 1990 43.91 0 2065428..2066495 - 355 157692788 fni BPUM_2020 - isopentenyl pyrophosphate isomerase 1991 41.49 0 2066510..2067661 - 383 157692789 rpsA BPUM_2021 - 30S ribosomal protein S1 1992 44.54 0 2067885..2068562 - 225 157692790 cmk BPUM_2022 - cytidylate kinase 1993 37.16 -1 2068634..2068816 - 60 157692791 ypfB BPUM_2023 - hypothetical protein 1994 40.59 0 2068880..2069527 - 215 157692792 ypfA BPUM_2024 - hypothetical protein 1995 38.22 0 2069629..2070978 - 449 157692793 ypeB BPUM_2025 - hypothetical protein 1996 42.65 0 2070995..2071906 - 303 157692794 sleB BPUM_2026 - spore cortex-lytic enzyme 1997 39.73 0 2072035..2072691 - 218 157692795 ypdC BPUM_2027 - hypothetical protein 1998 40.64 0 2072846..2073817 - 323 157692796 ypdA BPUM_2028 - thioredoxin reductase 1999 42.82 0 2073940..2075214 - 424 157692797 gudB BPUM_2029 - glutamate dehydrogenase 2000 39.86 0 2075409..2075990 - 193 157692798 ypbH BPUM_2030 - adaptor protein 2001 41.95 0 2076156..2076944 - 262 157692799 ypbG BPUM_2031 - metallophosphoesterase 2002 40.46 0 2077093..2077485 - 130 157692800 ypbF BPUM_2032 - hypothetical protein 2003 39.76 0 2077550..2078311 - 253 157692801 ypbE BPUM_2033 - hypothetical protein 2004 38.47 0 2078256..2078897 - 213 157692802 ypbD BPUM_2034 - hypothetical protein 2005 42.48 0 2078894..2080402 - 502 157692803 recQ BPUM_2035 - ATP-dependent helicase RecQ 2006 39.03 0 2080395..2081447 - 350 157692804 ypbB BPUM_2036 - hypothetical protein 2007 42.57 0 2081715..2081963 + 82 157692805 fer BPUM_2037 - ferredoxin 2008 37.63 0 2081998..2082579 - 193 157692806 ypaA BPUM_2038 - hypothetical protein 2009 40.83 0 2083143..2084717 + 524 157692807 serA BPUM_2039 - D-3-phosphoglycerate dehydrogenase 2010 44.81 +1 2084752..2085396 - 214 157692808 - BPUM_2040 - M23 family peptidase 2011 40.33 0 2085497..2086540 - 347 157692809 rsiX BPUM_2041 - sigma X negative regulator 2012 42.53 0 2086518..2087126 - 202 157692810 sigX BPUM_2042 - RNA polymerase sigma factor SigX 2013 38.57 0 2087237..2087446 - 69 157692811 - BPUM_2043 - hypothetical protein 2014 42.14 0 2087532..2089313 - 593 157692812 resE BPUM_2044 - sensor histidine kinase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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