version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1873 42.15 0 1961216..1961476 + 86 157692671 - BPUM_1903 - hypothetical protein 1874 42.49 0 1961597..1962262 + 221 157692672 - BPUM_1904 - hypothetical protein 1875 32.83 -2 1962295..1962492 - 65 157692673 ypmT BPUM_1905 - hypothetical protein 1876 37.57 0 1962515..1963081 - 188 157692674 ypmS BPUM_1906 - hypothetical protein 1877 39.50 0 1963091..1963852 - 253 157692675 ypmR BPUM_1907 - lipase 1878 38.92 0 1963922..1964512 - 196 157692676 ypmQ BPUM_1908 - electron transport protein 1879 41.99 0 1964537..1965379 - 280 157692677 - BPUM_1909 - DegV family protein 1880 42.06 0 1965567..1965818 - 83 157692678 ypmP BPUM_1910 - hypothetical protein 1881 39.72 0 1965855..1967123 - 422 157692679 ilvA BPUM_1911 - threonine dehydratase 1882 42.41 0 1967305..1968273 + 322 157692680 yplP BPUM_1912 - sigma L dependent transcriptional regulator 1883 41.31 0 1968288..1968926 + 212 157692681 - BPUM_1913 - hemolysin III 1884 40.54 0 1968961..1969584 - 207 157692682 ypkP BPUM_1914 - hypothetical protein 1885 41.56 0 1969604..1970089 - 161 157692683 dfrA BPUM_1915 - dihydrofolate reductase 1886 42.14 0 1970086..1970880 - 264 157692684 thyB BPUM_1916 - thymidylate synthase 1887 39.63 0 1970984..1971523 - 179 157692685 - BPUM_1917 - phosphatidylglycerophosphatase A 1888 42.23 0 1971530..1972147 - 205 157692686 ypjP BPUM_1918 - hypothetical protein 1889 36.00 -1 1972301..1972375 + 24 157692687 - BPUM_1919 - hypothetical protein 1890 43.73 0 1972579..1973367 - 262 157692688 ypiP BPUM_1920 - hypothetical protein 1891 44.14 0 1973434..1973868 - 144 157692689 yphP BPUM_1921 - hypothetical protein 1892 43.89 0 1973950..1975626 - 558 157692690 ilvD BPUM_1922 - dihydroxy-acid dehydratase 1893 43.54 0 1975934..1977070 - 378 157692691 ypgR BPUM_1923 - hypothetical protein 1894 46.90 +1 1977101..1977712 - 203 157692692 ypgQ BPUM_1924 - HD family metal dependent phosphohydrolase 1895 37.06 -1 1977726..1978208 - 160 157692693 bsaA BPUM_1925 - glutathione peroxidase 1896 42.78 0 1978283..1979965 - 560 157692694 fhs BPUM_1926 - formate--tetrahydrofolate ligase 1897 36.85 -1 1980103..1981011 + 302 157692695 metA BPUM_1927 - homoserine O-succinyltransferase 1898 35.59 -1 1981240..1982391 + 383 157692696 ugtP BPUM_1928 - diacylglycerol glucosyltransferase 1899 40.88 0 1982425..1983126 - 233 157692697 - BPUM_1929 - hypothetical protein 1900 38.81 0 1983385..1983585 + 66 157692698 cspD BPUM_1930 - cold shock protein 1901 32.79 -2 1983631..1983813 - 60 157692699 degR BPUM_1931 - regulatory protein DegR 1902 33.33 -2 1983983..1984165 - 60 157692700 ypeQ BPUM_1932 - hypothetical protein 1903 40.03 0 1984167..1984838 - 223 157692701 ypeP BPUM_1933 - hypothetical protein 1904 40.29 0 1984933..1985622 + 229 157692702 ypdP BPUM_1934 - hypothetical protein 1905 40.40 0 1985624..1986019 + 131 157692703 rnhA BPUM_1935 - ribonuclease H 1906 38.10 0 1986064..1986189 + 41 157692704 sspL BPUM_1936 - small acid-soluble spore protein L 1907 40.43 0 1986206..1987093 - 295 157692705 ypcP BPUM_1937 - 5'-3' exonuclease 1908 44.70 0 1987368..1987631 - 87 157692706 ypbS BPUM_1938 - hypothetical protein 1909 40.67 0 1987673..1991272 - 1199 157692707 - BPUM_1939 - hypothetical protein 1910 37.84 0 1991577..1992086 - 169 157692708 ypbQ BPUM_1940 - isoprenylcysteine carboxyl methyltransferase 1911 43.78 0 1992083..1993183 - 366 157692709 bcsA BPUM_1941 - naringenin-chalcone synthase 1912 38.93 0 1993753..1994556 + 267 157692710 yheN2 BPUM_1942 - polysaccharide deacetylase 1913 43.26 0 1994748..1996067 - 439 157692711 pbuX BPUM_1943 - NCS2 family uracil:xanthine symporter-2 1914 40.68 0 1996064..1996648 - 194 157692712 xpt BPUM_1944 - xanthine phosphoribosyltransferase 1915 39.11 0 1997002..1998507 - 501 157692713 ypwA BPUM_1945 - M32 family carboxypeptidase 1916 40.71 0 1998635..2000572 - 645 157692714 ypvA BPUM_1946 - ATP-dependent helicase 1917 38.97 0 2000634..2000846 + 70 157692715 - BPUM_1947 - hypothetical protein 1918 39.20 0 2000974..2001774 - 266 157692716 - BPUM_1948 - integrase 1919 41.44 0 2001792..2002124 - 110 157692717 - BPUM_1949 - transposase 1920 43.72 0 2002240..2003394 - 384 157692718 - BPUM_1950 - site-specific DNA-methyltransferase (adenine-specific) 1921 33.66 -2 2003949..2004254 - 101 157692719 ypsB BPUM_1951 - hypothetical protein 1922 41.39 0 2004312..2004944 - 210 157692720 ypsA BPUM_1952 - hypothetical protein 1923 40.79 0 2005474..2006721 - 415 157692721 yprB BPUM_1953 - hypothetical protein 1924 43.35 0 2006745..2008991 - 748 157692722 yprA BPUM_1954 - ATP-dependent helicase 1925 44.35 0 2009236..2010270 + 344 157692723 yqiG BPUM_1955 - FMN reductase 1926 40.63 0 2010319..2010825 - 168 157692724 ypqE BPUM_1956 - PTS family glucose/sucrose porter component IIA 1927 41.90 0 2010994..2011413 + 139 157692725 - BPUM_1957 - hypothetical protein 1928 44.81 +1 2011434..2011886 - 150 157692726 yppG BPUM_1958 - hypothetical protein 1929 39.78 0 2011993..2012364 - 123 157692727 yppE BPUM_1959 - hypothetical protein 1930 41.43 0 2012436..2012756 + 106 157692728 - BPUM_1960 - hypothetical protein 1931 41.90 0 2012852..2012956 + 34 157692729 sspM BPUM_1961 - small acid-soluble spore protein M 1932 39.50 0 2012979..2013935 - 318 157692730 yppC BPUM_1962 - hypothetical protein 1933 40.13 0 2013982..2014599 + 205 157692731 recU BPUM_1963 - Holliday junction-specific endonuclease 1934 40.78 0 2014637..2017348 + 903 157692732 ponA BPUM_1964 - penicillin-binding proteins 1A and 1B 1935 37.84 0 2017383..2017892 - 169 157692733 ypoC BPUM_1965 - hypothetical protein 1936 42.99 0 2017889..2018551 - 220 157692734 nth BPUM_1966 - DNA-(apurinic or apyrimidinic site) lyase 1937 40.14 0 2018569..2019273 - 234 157692735 dnaD BPUM_1967 - DNA replication protein DnaD 1938 40.69 0 2019371..2020729 - 452 157692736 asnS BPUM_1968 - asparaginyl-tRNA synthetase 1939 38.48 0 2020779..2021264 - 161 157692737 ypmB BPUM_1969 - hypothetical protein 1940 33.33 -2 2021277..2021447 - 56 157692738 ypmA BPUM_1970 - hypothetical protein 1941 42.07 0 2021580..2024372 - 930 157692739 dinG BPUM_1971 - bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon 1942 39.58 0 2024486..2024869 - 127 157692740 panD BPUM_1972 - aspartate alpha-decarboxylase 1943 42.91 0 2024862..2025728 - 288 157692741 panC BPUM_1973 - pantoate--beta-alanine ligase 1944 42.02 0 2025725..2026564 - 279 157692742 panB BPUM_1974 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1945 43.70 0 2026762..2027745 - 327 157692743 birA BPUM_1975 - bifunctional transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase 1946 43.47 0 2027718..2028920 - 400 157692744 cca BPUM_1976 - tRNA CCA-pyrophosphorylase 1947 43.28 0 2028913..2030058 - 381 157692745 - BPUM_1977 - glycosyltransferase 1948 42.98 0 2030061..2030765 - 234 157692746 ypjG BPUM_1978 - hypothetical protein 1949 44.05 0 2030752..2031171 - 139 157692747 mgsA BPUM_1979 - methylglyoxal synthase 1950 42.41 0 2031189..2031992 - 267 157692748 dapB BPUM_1980 - dihydrodipicolinate reductase 1951 40.48 0 2031998..2032333 - 111 157692749 ypjD BPUM_1981 - pyrophosphatase 1952 41.92 0 2032471..2033343 + 290 157692750 ypjC BPUM_1982 - hypothetical protein 1953 41.04 0 2033374..2034177 - 267 157692751 ypjB BPUM_1983 - sporulation protein YpjB 1954 39.96 0 2034243..2034800 - 185 157692752 ypjA BPUM_1984 - hypothetical protein 1955 44.14 0 2034938..2035705 - 255 157692753 qcrC BPUM_1985 - menaquinol:cytochrome c dehydrogenase cytochrome b/c subunit 1956 42.52 0 2035748..2036422 - 224 157692754 qcrB BPUM_1986 - cytochrome b6 1957 46.15 +1 2036425..2036931 - 168 157692755 qcrA BPUM_1987 - menaquinol:cytochrome c dehydrogenase iron-sulfur subunit 1958 38.26 0 2037076..2037522 - 148 157692756 ypiF BPUM_1988 - hypothetical protein 1959 35.56 -1 2037584..2038123 - 179 157692757 ypiB BPUM_1989 - hypothetical protein 1960 38.88 0 2038199..2039497 - 432 157692758 ypiA BPUM_1990 - hypothetical protein 1961 40.95 0 2039762..2041048 - 428 157692759 aroE BPUM_1991 - 3-phosphoshikimate 1-carboxyvinyltransferase 1962 39.83 0 2041059..2042213 - 384 157692760 tyrA BPUM_1992 - prephenate dehydrogenase 1963 40.89 0 2042288..2043385 - 365 157692761 hisC BPUM_1993 - histidinol-phosphate aminotransferase 1964 39.80 0 2043396..2044199 - 267 157692762 trpA BPUM_1994 - tryptophan synthase subunit alpha 1965 44.17 0 2044196..2045395 - 399 157692763 trpB BPUM_1995 - tryptophan synthase subunit beta 1966 42.42 0 2045376..2046035 - 219 157692764 trpF BPUM_1996 - N-(5'-phosphoribosyl)anthranilate isomerase 1967 38.51 0 2046041..2046793 - 250 157692765 trpC BPUM_1997 - indole-3-glycerol-phosphate synthase 1968 43.60 0 2046786..2047808 - 340 157692766 trpD BPUM_1998 - anthranilate phosphoribosyltransferase 1969 41.28 0 2047780..2049327 - 515 157692767 trpE BPUM_1999 - anthranilate synthase component I 1970 42.71 0 2049560..2049943 - 127 157692768 aroH BPUM_2000 - chorismate mutase 1971 43.68 0 2049940..2051031 - 363 157692769 aroB BPUM_2001 - 3-dehydroquinate synthase 1972 44.67 0 2051031..2052203 - 390 157692770 aroF BPUM_2002 - chorismate synthase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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