version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1831 40.69 0 1923622..1924572 + 316 157692629 yocS BPUM_1860 - BASS family bile acid:sodium (Na+) symporter 1832 45.58 +1 1924607..1925863 - 418 157692630 odhB BPUM_1861 - dihydrolipoamide acetyltransferase 1833 41.73 0 1925878..1928712 - 944 157692631 odhA BPUM_1862 - alpha-ketoglutarate decarboxylase 1834 41.05 0 1928938..1930854 - 638 157692632 yojO BPUM_1863 - regulator of nitric oxide reductase 1835 43.12 0 1930866..1931744 - 292 157692633 - BPUM_1864 - nitric oxide reductase 1836 44.28 0 1931834..1932454 - 206 157692634 yojM BPUM_1865 - copper/zinc (Cu/Zn) superoxide dismutase 1837 39.67 0 1934235..1934849 - 204 157692635 - BPUM_1867 - hypothetical protein 1838 42.66 0 1935113..1936474 + 453 157692636 - BPUM_1868 - multidrug efflux protein 1839 42.34 0 1936520..1937185 - 221 157692637 - BPUM_1869 - hypothetical protein 1840 42.45 0 1937204..1937554 - 116 157692638 - BPUM_1870 - hypothetical protein 1841 39.72 0 1937551..1937832 - 93 157692639 - BPUM_1871 - hypothetical protein 1842 39.07 0 1937911..1938816 - 301 157692640 rarD BPUM_1872 - DMT superfamily drug/metabolite transporter 1843 39.45 0 1938912..1939385 + 157 157692641 yozR BPUM_1873 - hypothetical protein 1844 50.23 +2 1939426..1939644 - 72 157692642 - BPUM_1874 - hypothetical protein 1845 39.34 0 1939720..1940052 - 110 157692643 yodB BPUM_1875 - transcriptional regulator 1846 39.32 0 1940192..1940809 + 205 157692644 - BPUM_1876 - nitroreductase 1847 39.22 0 1941046..1941249 + 67 157692645 - BPUM_1877 - hypothetical protein 1848 40.96 0 1941249..1942742 + 497 157692646 yodF BPUM_1878 - SSS family solute/sodium (Na+) symporter 1849 32.13 -2 1942821..1943735 - 304 157692647 - BPUM_1879 - O-methyltransferase 1850 40.76 0 1944081..1945466 - 461 157692648 ctpA BPUM_1880 - peptidase 1851 43.78 0 1945618..1946316 + 232 157692649 - BPUM_1881 - hypothetical protein 1852 48.02 +1 1946409..1946660 + 83 157692650 yodI BPUM_1882 - spore protein YodI 1853 38.99 0 1946711..1947541 - 276 157692651 yodJ BPUM_1883 - serine-type D-Ala-D-Ala carboxypeptidase 1854 41.95 0 1947610..1948305 - 231 157692652 deoD BPUM_1884 - purine-nucleoside phosphorylase 1855 40.88 0 1948419..1948736 - 105 157692653 - BPUM_1885 - hypothetical protein 1856 39.74 0 1948791..1949399 - 202 157692654 - BPUM_1886 - phosphatase 1857 40.94 0 1949448..1949618 - 56 157692655 yozD BPUM_1887 - hypothetical protein 1858 34.62 -1 1949639..1949872 + 77 157692656 - BPUM_1888 - hypothetical protein 1859 38.77 0 1949869..1950549 - 226 157692657 yodN BPUM_1889 - hypothetical protein 1860 36.00 -1 1950694..1950918 - 74 157692658 yozE BPUM_1890 - hypothetical protein 1861 37.23 -1 1950997..1951278 - 93 157692659 - BPUM_1891 - hypothetical protein 1862 42.97 0 1951281..1952681 - 466 157692660 kamA BPUM_1892 - lysine 2,3-aminomutase 1863 41.54 0 1952799..1954175 - 458 157692661 - BPUM_1893 - transcriptional regulator 1864 40.82 0 1954334..1955629 - 431 157692662 cgeD BPUM_1894 - spore maturation protein CgeD 1865 39.25 0 1955647..1955967 - 106 157692663 cgeC BPUM_1895 - spore maturation protein CgeC 1866 39.30 0 1956175..1956576 + 133 157692664 cgeA BPUM_1896 - spore maturation protein CgeA 1867 41.23 0 1956592..1957554 + 320 157692665 cgeB BPUM_1897 - spore maturation protein CgeB 1868 41.00 0 1957589..1958305 - 238 157692666 neuA BPUM_1898 - N-acylneuraminate cytidylyltransferase 1869 41.11 0 1958549..1959577 + 342 157692667 capD BPUM_1899 - capsular polysaccharide biosynthesis protein D 1870 42.36 0 1959628..1960059 - 143 157692668 msrB BPUM_1900 - methionine sulfoxide reductase B 1871 40.97 0 1960056..1960592 - 178 157692669 msrA BPUM_1901 - methionine sulfoxide reductase A 1872 37.27 -1 1960730..1961161 + 143 157692670 - BPUM_1902 - MarR family transcriptional regulator 1873 42.15 0 1961216..1961476 + 86 157692671 - BPUM_1903 - hypothetical protein 1874 42.49 0 1961597..1962262 + 221 157692672 - BPUM_1904 - hypothetical protein 1875 32.83 -2 1962295..1962492 - 65 157692673 ypmT BPUM_1905 - hypothetical protein 1876 37.57 0 1962515..1963081 - 188 157692674 ypmS BPUM_1906 - hypothetical protein 1877 39.50 0 1963091..1963852 - 253 157692675 ypmR BPUM_1907 - lipase 1878 38.92 0 1963922..1964512 - 196 157692676 ypmQ BPUM_1908 - electron transport protein 1879 41.99 0 1964537..1965379 - 280 157692677 - BPUM_1909 - DegV family protein 1880 42.06 0 1965567..1965818 - 83 157692678 ypmP BPUM_1910 - hypothetical protein 1881 39.72 0 1965855..1967123 - 422 157692679 ilvA BPUM_1911 - threonine dehydratase 1882 42.41 0 1967305..1968273 + 322 157692680 yplP BPUM_1912 - sigma L dependent transcriptional regulator 1883 41.31 0 1968288..1968926 + 212 157692681 - BPUM_1913 - hemolysin III 1884 40.54 0 1968961..1969584 - 207 157692682 ypkP BPUM_1914 - hypothetical protein 1885 41.56 0 1969604..1970089 - 161 157692683 dfrA BPUM_1915 - dihydrofolate reductase 1886 42.14 0 1970086..1970880 - 264 157692684 thyB BPUM_1916 - thymidylate synthase 1887 39.63 0 1970984..1971523 - 179 157692685 - BPUM_1917 - phosphatidylglycerophosphatase A 1888 42.23 0 1971530..1972147 - 205 157692686 ypjP BPUM_1918 - hypothetical protein 1889 36.00 -1 1972301..1972375 + 24 157692687 - BPUM_1919 - hypothetical protein 1890 43.73 0 1972579..1973367 - 262 157692688 ypiP BPUM_1920 - hypothetical protein 1891 44.14 0 1973434..1973868 - 144 157692689 yphP BPUM_1921 - hypothetical protein 1892 43.89 0 1973950..1975626 - 558 157692690 ilvD BPUM_1922 - dihydroxy-acid dehydratase 1893 43.54 0 1975934..1977070 - 378 157692691 ypgR BPUM_1923 - hypothetical protein 1894 46.90 +1 1977101..1977712 - 203 157692692 ypgQ BPUM_1924 - HD family metal dependent phosphohydrolase 1895 37.06 -1 1977726..1978208 - 160 157692693 bsaA BPUM_1925 - glutathione peroxidase 1896 42.78 0 1978283..1979965 - 560 157692694 fhs BPUM_1926 - formate--tetrahydrofolate ligase 1897 36.85 -1 1980103..1981011 + 302 157692695 metA BPUM_1927 - homoserine O-succinyltransferase 1898 35.59 -1 1981240..1982391 + 383 157692696 ugtP BPUM_1928 - diacylglycerol glucosyltransferase 1899 40.88 0 1982425..1983126 - 233 157692697 - BPUM_1929 - hypothetical protein 1900 38.81 0 1983385..1983585 + 66 157692698 cspD BPUM_1930 - cold shock protein 1901 32.79 -2 1983631..1983813 - 60 157692699 degR BPUM_1931 - regulatory protein DegR 1902 33.33 -2 1983983..1984165 - 60 157692700 ypeQ BPUM_1932 - hypothetical protein 1903 40.03 0 1984167..1984838 - 223 157692701 ypeP BPUM_1933 - hypothetical protein 1904 40.29 0 1984933..1985622 + 229 157692702 ypdP BPUM_1934 - hypothetical protein 1905 40.40 0 1985624..1986019 + 131 157692703 rnhA BPUM_1935 - ribonuclease H 1906 38.10 0 1986064..1986189 + 41 157692704 sspL BPUM_1936 - small acid-soluble spore protein L 1907 40.43 0 1986206..1987093 - 295 157692705 ypcP BPUM_1937 - 5'-3' exonuclease 1908 44.70 0 1987368..1987631 - 87 157692706 ypbS BPUM_1938 - hypothetical protein 1909 40.67 0 1987673..1991272 - 1199 157692707 - BPUM_1939 - hypothetical protein 1910 37.84 0 1991577..1992086 - 169 157692708 ypbQ BPUM_1940 - isoprenylcysteine carboxyl methyltransferase 1911 43.78 0 1992083..1993183 - 366 157692709 bcsA BPUM_1941 - naringenin-chalcone synthase 1912 38.93 0 1993753..1994556 + 267 157692710 yheN2 BPUM_1942 - polysaccharide deacetylase 1913 43.26 0 1994748..1996067 - 439 157692711 pbuX BPUM_1943 - NCS2 family uracil:xanthine symporter-2 1914 40.68 0 1996064..1996648 - 194 157692712 xpt BPUM_1944 - xanthine phosphoribosyltransferase 1915 39.11 0 1997002..1998507 - 501 157692713 ypwA BPUM_1945 - M32 family carboxypeptidase 1916 40.71 0 1998635..2000572 - 645 157692714 ypvA BPUM_1946 - ATP-dependent helicase 1917 38.97 0 2000634..2000846 + 70 157692715 - BPUM_1947 - hypothetical protein 1918 39.20 0 2000974..2001774 - 266 157692716 - BPUM_1948 - integrase 1919 41.44 0 2001792..2002124 - 110 157692717 - BPUM_1949 - transposase 1920 43.72 0 2002240..2003394 - 384 157692718 - BPUM_1950 - site-specific DNA-methyltransferase (adenine-specific) 1921 33.66 -2 2003949..2004254 - 101 157692719 ypsB BPUM_1951 - hypothetical protein 1922 41.39 0 2004312..2004944 - 210 157692720 ypsA BPUM_1952 - hypothetical protein 1923 40.79 0 2005474..2006721 - 415 157692721 yprB BPUM_1953 - hypothetical protein 1924 43.35 0 2006745..2008991 - 748 157692722 yprA BPUM_1954 - ATP-dependent helicase 1925 44.35 0 2009236..2010270 + 344 157692723 yqiG BPUM_1955 - FMN reductase 1926 40.63 0 2010319..2010825 - 168 157692724 ypqE BPUM_1956 - PTS family glucose/sucrose porter component IIA 1927 41.90 0 2010994..2011413 + 139 157692725 - BPUM_1957 - hypothetical protein 1928 44.81 +1 2011434..2011886 - 150 157692726 yppG BPUM_1958 - hypothetical protein 1929 39.78 0 2011993..2012364 - 123 157692727 yppE BPUM_1959 - hypothetical protein 1930 41.43 0 2012436..2012756 + 106 157692728 - BPUM_1960 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.