version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1800 42.30 0 1891128..1892465 - 445 157692598 xylA BPUM_1829 - xylose isomerase 1801 42.72 0 1892679..1893839 + 386 157692599 xylR BPUM_1830 - transcriptional regulator 1802 42.37 0 1893889..1895493 - 534 157692600 xynB BPUM_1831 - xylan 1,4-beta-xylosidase 1803 40.80 0 1895517..1896908 - 463 157692601 xynP BPUM_1832 - GPH family glycoside-pentoside-hexuronide:cation symporter 1804 42.34 0 1897423..1897755 - 110 157692602 csaA BPUM_1833 - secretion chaperone CsaA 1805 40.00 0 1897985..1898464 + 159 157692603 ywmF BPUM_1834 - hypothetical protein 1806 40.01 0 1898454..1900085 - 543 157692604 - BPUM_1835 - hypothetical protein 1807 42.74 0 1900078..1900683 - 201 157692605 - BPUM_1836 - hypothetical protein 1808 39.12 0 1900646..1901527 - 293 157692606 - BPUM_1837 - hypothetical protein 1809 42.23 0 1901676..1902248 - 190 157692607 yobS BPUM_1838 - TetR family transcriptional regulator 1810 43.89 0 1902252..1902971 - 239 157692608 - BPUM_1839 - zinc (Zn2+)-dependent hydrolase 1811 40.51 0 1903009..1903482 - 157 157692609 - BPUM_1840 - hypothetical protein 1812 41.59 0 1903537..1904469 - 310 157692610 yobV BPUM_1841 - transcriptional regulator 1813 39.24 0 1904588..1905112 + 174 157692611 - BPUM_1842 - hypothetical protein 1814 41.52 0 1905348..1905677 - 109 157692612 yozA BPUM_1843 - transcription regulator ArsR 1815 41.18 0 1905864..1907189 + 441 157692613 - BPUM_1844 - APC family amino acid-polyamine-organocation transporter 1816 37.25 -1 1907287..1907949 + 220 157692614 yocA BPUM_1845 - hypothetical protein 1817 43.90 0 1908183..1909100 - 305 157692615 yqiQ BPUM_1846 - carboxyvinyl-carboxyphosphonate phosphorylmutase 1818 44.19 0 1909113..1910549 - 478 157692616 prpD BPUM_1847 - 2-methylcitrate dehydratase 1819 42.69 0 1910552..1911694 - 380 157692617 mmgD BPUM_1848 - citrate synthase 3 1820 36.48 -1 1911863..1912402 - 179 157692618 yozB BPUM_1849 - hypothetical protein 1821 38.29 0 1912529..1913113 + 194 157692619 yocC BPUM_1850 - hypothetical protein 1822 39.77 0 1913267..1914058 - 263 157692620 yocH BPUM_1851 - cell wall protein 1823 40.01 0 1914315..1916096 - 593 157692621 yocI BPUM_1852 - ATP-dependent helicase 1824 40.20 0 1916548..1916955 - 135 157692622 yocK BPUM_1853 - general stress protein 1825 41.05 0 1917140..1917787 - 215 157692623 yhfK BPUM_1854 - hypothetical protein 1826 38.35 0 1917965..1918303 - 112 157692624 yozO BPUM_1855 - hypothetical protein 1827 37.09 -1 1918770..1918982 - 70 157692625 yozC BPUM_1856 - hypothetical protein 1828 44.38 0 1919196..1920680 + 494 157692626 dhaS BPUM_1857 - aldehyde dehydrogenase (NAD(+)) 1829 42.56 0 1920783..1922657 + 624 157692627 sqhC BPUM_1858 - squalene-hopene cyclase 1830 43.19 0 1922650..1923471 + 273 157692628 sodF BPUM_1859 - iron (Fe) superoxide dismutase 1831 40.69 0 1923622..1924572 + 316 157692629 yocS BPUM_1860 - BASS family bile acid:sodium (Na+) symporter 1832 45.58 +1 1924607..1925863 - 418 157692630 odhB BPUM_1861 - dihydrolipoamide acetyltransferase 1833 41.73 0 1925878..1928712 - 944 157692631 odhA BPUM_1862 - alpha-ketoglutarate decarboxylase 1834 41.05 0 1928938..1930854 - 638 157692632 yojO BPUM_1863 - regulator of nitric oxide reductase 1835 43.12 0 1930866..1931744 - 292 157692633 - BPUM_1864 - nitric oxide reductase 1836 44.28 0 1931834..1932454 - 206 157692634 yojM BPUM_1865 - copper/zinc (Cu/Zn) superoxide dismutase 1837 39.67 0 1934235..1934849 - 204 157692635 - BPUM_1867 - hypothetical protein 1838 42.66 0 1935113..1936474 + 453 157692636 - BPUM_1868 - multidrug efflux protein 1839 42.34 0 1936520..1937185 - 221 157692637 - BPUM_1869 - hypothetical protein 1840 42.45 0 1937204..1937554 - 116 157692638 - BPUM_1870 - hypothetical protein 1841 39.72 0 1937551..1937832 - 93 157692639 - BPUM_1871 - hypothetical protein 1842 39.07 0 1937911..1938816 - 301 157692640 rarD BPUM_1872 - DMT superfamily drug/metabolite transporter 1843 39.45 0 1938912..1939385 + 157 157692641 yozR BPUM_1873 - hypothetical protein 1844 50.23 +2 1939426..1939644 - 72 157692642 - BPUM_1874 - hypothetical protein 1845 39.34 0 1939720..1940052 - 110 157692643 yodB BPUM_1875 - transcriptional regulator 1846 39.32 0 1940192..1940809 + 205 157692644 - BPUM_1876 - nitroreductase 1847 39.22 0 1941046..1941249 + 67 157692645 - BPUM_1877 - hypothetical protein 1848 40.96 0 1941249..1942742 + 497 157692646 yodF BPUM_1878 - SSS family solute/sodium (Na+) symporter 1849 32.13 -2 1942821..1943735 - 304 157692647 - BPUM_1879 - O-methyltransferase 1850 40.76 0 1944081..1945466 - 461 157692648 ctpA BPUM_1880 - peptidase 1851 43.78 0 1945618..1946316 + 232 157692649 - BPUM_1881 - hypothetical protein 1852 48.02 +1 1946409..1946660 + 83 157692650 yodI BPUM_1882 - spore protein YodI 1853 38.99 0 1946711..1947541 - 276 157692651 yodJ BPUM_1883 - serine-type D-Ala-D-Ala carboxypeptidase 1854 41.95 0 1947610..1948305 - 231 157692652 deoD BPUM_1884 - purine-nucleoside phosphorylase 1855 40.88 0 1948419..1948736 - 105 157692653 - BPUM_1885 - hypothetical protein 1856 39.74 0 1948791..1949399 - 202 157692654 - BPUM_1886 - phosphatase 1857 40.94 0 1949448..1949618 - 56 157692655 yozD BPUM_1887 - hypothetical protein 1858 34.62 -1 1949639..1949872 + 77 157692656 - BPUM_1888 - hypothetical protein 1859 38.77 0 1949869..1950549 - 226 157692657 yodN BPUM_1889 - hypothetical protein 1860 36.00 -1 1950694..1950918 - 74 157692658 yozE BPUM_1890 - hypothetical protein 1861 37.23 -1 1950997..1951278 - 93 157692659 - BPUM_1891 - hypothetical protein 1862 42.97 0 1951281..1952681 - 466 157692660 kamA BPUM_1892 - lysine 2,3-aminomutase 1863 41.54 0 1952799..1954175 - 458 157692661 - BPUM_1893 - transcriptional regulator 1864 40.82 0 1954334..1955629 - 431 157692662 cgeD BPUM_1894 - spore maturation protein CgeD 1865 39.25 0 1955647..1955967 - 106 157692663 cgeC BPUM_1895 - spore maturation protein CgeC 1866 39.30 0 1956175..1956576 + 133 157692664 cgeA BPUM_1896 - spore maturation protein CgeA 1867 41.23 0 1956592..1957554 + 320 157692665 cgeB BPUM_1897 - spore maturation protein CgeB 1868 41.00 0 1957589..1958305 - 238 157692666 neuA BPUM_1898 - N-acylneuraminate cytidylyltransferase 1869 41.11 0 1958549..1959577 + 342 157692667 capD BPUM_1899 - capsular polysaccharide biosynthesis protein D 1870 42.36 0 1959628..1960059 - 143 157692668 msrB BPUM_1900 - methionine sulfoxide reductase B 1871 40.97 0 1960056..1960592 - 178 157692669 msrA BPUM_1901 - methionine sulfoxide reductase A 1872 37.27 -1 1960730..1961161 + 143 157692670 - BPUM_1902 - MarR family transcriptional regulator 1873 42.15 0 1961216..1961476 + 86 157692671 - BPUM_1903 - hypothetical protein 1874 42.49 0 1961597..1962262 + 221 157692672 - BPUM_1904 - hypothetical protein 1875 32.83 -2 1962295..1962492 - 65 157692673 ypmT BPUM_1905 - hypothetical protein 1876 37.57 0 1962515..1963081 - 188 157692674 ypmS BPUM_1906 - hypothetical protein 1877 39.50 0 1963091..1963852 - 253 157692675 ypmR BPUM_1907 - lipase 1878 38.92 0 1963922..1964512 - 196 157692676 ypmQ BPUM_1908 - electron transport protein 1879 41.99 0 1964537..1965379 - 280 157692677 - BPUM_1909 - DegV family protein 1880 42.06 0 1965567..1965818 - 83 157692678 ypmP BPUM_1910 - hypothetical protein 1881 39.72 0 1965855..1967123 - 422 157692679 ilvA BPUM_1911 - threonine dehydratase 1882 42.41 0 1967305..1968273 + 322 157692680 yplP BPUM_1912 - sigma L dependent transcriptional regulator 1883 41.31 0 1968288..1968926 + 212 157692681 - BPUM_1913 - hemolysin III 1884 40.54 0 1968961..1969584 - 207 157692682 ypkP BPUM_1914 - hypothetical protein 1885 41.56 0 1969604..1970089 - 161 157692683 dfrA BPUM_1915 - dihydrofolate reductase 1886 42.14 0 1970086..1970880 - 264 157692684 thyB BPUM_1916 - thymidylate synthase 1887 39.63 0 1970984..1971523 - 179 157692685 - BPUM_1917 - phosphatidylglycerophosphatase A 1888 42.23 0 1971530..1972147 - 205 157692686 ypjP BPUM_1918 - hypothetical protein 1889 36.00 -1 1972301..1972375 + 24 157692687 - BPUM_1919 - hypothetical protein 1890 43.73 0 1972579..1973367 - 262 157692688 ypiP BPUM_1920 - hypothetical protein 1891 44.14 0 1973434..1973868 - 144 157692689 yphP BPUM_1921 - hypothetical protein 1892 43.89 0 1973950..1975626 - 558 157692690 ilvD BPUM_1922 - dihydroxy-acid dehydratase 1893 43.54 0 1975934..1977070 - 378 157692691 ypgR BPUM_1923 - hypothetical protein 1894 46.90 +1 1977101..1977712 - 203 157692692 ypgQ BPUM_1924 - HD family metal dependent phosphohydrolase 1895 37.06 -1 1977726..1978208 - 160 157692693 bsaA BPUM_1925 - glutathione peroxidase 1896 42.78 0 1978283..1979965 - 560 157692694 fhs BPUM_1926 - formate--tetrahydrofolate ligase 1897 36.85 -1 1980103..1981011 + 302 157692695 metA BPUM_1927 - homoserine O-succinyltransferase 1898 35.59 -1 1981240..1982391 + 383 157692696 ugtP BPUM_1928 - diacylglycerol glucosyltransferase 1899 40.88 0 1982425..1983126 - 233 157692697 - BPUM_1929 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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