version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1763 42.58 0 1838660..1839784 + 374 157692561 - BPUM_1791 - carbohydrate diacid transcriptional regulator 1764 45.55 +1 1839856..1841271 + 471 157692562 glcD BPUM_1792 - (S)-2-hydroxy-acid oxidase subunit D 1765 47.40 +1 1841268..1842611 + 447 157692563 glcF BPUM_1793 - (S)-2-hydroxy-acid oxidase subunit F 1766 42.17 0 1842676..1844169 + 497 157692564 gerA BPUM_1794 - spore germination protein A 1767 38.15 0 1844182..1845282 + 366 157692565 gerB BPUM_1795 - APC family amino acid-polyamine-organocation transporter 1768 36.64 -1 1845261..1846379 + 372 157692566 gerC BPUM_1796 - spore germination protein C 1769 35.52 -1 1846392..1846574 - 60 157692567 - BPUM_1797 - hypothetical protein 1770 33.33 -2 1847189..1847419 - 76 157692568 - BPUM_1799 - hypothetical protein 1771 42.79 0 1847690..1848292 + 200 157692569 - BPUM_1800 - hypothetical protein 1772 42.58 0 1848333..1849154 - 273 157692570 yjjA BPUM_1801 - uroporphyrinogen-III synthase 1773 41.38 0 1849298..1849918 + 206 157692571 - BPUM_1802 - hypothetical protein 1774 41.93 0 1849957..1850991 - 344 157692572 yvbT BPUM_1803 - flavine monooxygenase 1775 54.23 +2 1851151..1856748 + 1865 157692573 - BPUM_1804 - triple helix repeat-containing collagen 1776 38.86 0 1856768..1857328 - 186 157692574 cat86 BPUM_1805 - chloramphenicol O-acetyltransferase 1777 40.20 0 1857393..1858760 - 455 157692575 - BPUM_1806 - MATE family multi-antimicrobial extrusion protein 1778 41.89 0 1858780..1860264 - 494 157692576 dacC BPUM_1807 - serine-type D-Ala-D-Ala carboxypeptidase 1779 42.41 0 1860392..1861372 - 326 157692577 pme BPUM_1808 - pectinesterase 1780 36.73 -1 1861467..1862201 - 244 157692578 yetF BPUM_1809 - hypothetical protein 1781 40.12 0 1862229..1862552 - 107 157692579 nasE BPUM_1810 - nitrite reductase (NAD(P)H) small subunit 1782 43.87 0 1862567..1864987 - 806 157692580 nasD BPUM_1811 - nitrite reductase (NAD(P)H) large subunit 1783 38.05 0 1865497..1866852 + 451 157692581 - BPUM_1812 - transposase 1784 44.11 0 1866990..1868474 - 494 157692582 gltB BPUM_1813 - glutamate synthase subunit beta 1785 44.27 0 1868491..1873062 - 1523 157692583 gltA BPUM_1814 - glutamate synthase (NADPH) large subunit 1786 40.53 0 1873216..1874118 + 300 157692584 gltC BPUM_1815 - LysR family transcriptional regulator 1787 43.60 0 1874213..1875946 + 577 157692585 yfiB BPUM_1816 - ABC transporter ATP-binding protein 1788 43.45 0 1875955..1877772 + 605 157692586 yfiC BPUM_1817 - ABC transporter ATP-binding protein 1789 37.96 0 1877819..1878640 - 273 157692587 bltR BPUM_1818 - MerR family transcriptional regulator 1790 40.26 0 1878691..1879296 + 201 157692588 yrkN BPUM_1819 - acetyltransferase 1791 38.05 0 1879416..1880771 - 451 157692589 - BPUM_1820 - transposase 1792 38.32 0 1880869..1881429 - 186 157692590 yjcK BPUM_1821 - ribosomal-protein-alanine N-acetyltransferase 1793 43.34 0 1881514..1882782 - 422 157692591 proA2 BPUM_1822 - glutamate-5-semialdehyde dehydrogenase 1794 40.66 0 1882796..1883914 - 372 157692592 proJ BPUM_1823 - gamma-glutamyl kinase 1795 44.11 0 1883942..1884739 - 265 157692593 proH BPUM_1824 - pyrroline-5-carboxylate reductase 1 1796 43.69 0 1885211..1886407 + 398 157692594 - BPUM_1825 - cytochrome P450 1797 44.74 +1 1886529..1888571 + 680 157692595 yoaE BPUM_1826 - molybdopterin dehydrogenase 1798 42.79 0 1888816..1889502 - 228 157692596 - BPUM_1827 - glycoside hydrolase 1799 46.07 +1 1889593..1891092 - 499 157692597 xylB BPUM_1828 - xylulokinase 1800 42.30 0 1891128..1892465 - 445 157692598 xylA BPUM_1829 - xylose isomerase 1801 42.72 0 1892679..1893839 + 386 157692599 xylR BPUM_1830 - transcriptional regulator 1802 42.37 0 1893889..1895493 - 534 157692600 xynB BPUM_1831 - xylan 1,4-beta-xylosidase 1803 40.80 0 1895517..1896908 - 463 157692601 xynP BPUM_1832 - GPH family glycoside-pentoside-hexuronide:cation symporter 1804 42.34 0 1897423..1897755 - 110 157692602 csaA BPUM_1833 - secretion chaperone CsaA 1805 40.00 0 1897985..1898464 + 159 157692603 ywmF BPUM_1834 - hypothetical protein 1806 40.01 0 1898454..1900085 - 543 157692604 - BPUM_1835 - hypothetical protein 1807 42.74 0 1900078..1900683 - 201 157692605 - BPUM_1836 - hypothetical protein 1808 39.12 0 1900646..1901527 - 293 157692606 - BPUM_1837 - hypothetical protein 1809 42.23 0 1901676..1902248 - 190 157692607 yobS BPUM_1838 - TetR family transcriptional regulator 1810 43.89 0 1902252..1902971 - 239 157692608 - BPUM_1839 - zinc (Zn2+)-dependent hydrolase 1811 40.51 0 1903009..1903482 - 157 157692609 - BPUM_1840 - hypothetical protein 1812 41.59 0 1903537..1904469 - 310 157692610 yobV BPUM_1841 - transcriptional regulator 1813 39.24 0 1904588..1905112 + 174 157692611 - BPUM_1842 - hypothetical protein 1814 41.52 0 1905348..1905677 - 109 157692612 yozA BPUM_1843 - transcription regulator ArsR 1815 41.18 0 1905864..1907189 + 441 157692613 - BPUM_1844 - APC family amino acid-polyamine-organocation transporter 1816 37.25 -1 1907287..1907949 + 220 157692614 yocA BPUM_1845 - hypothetical protein 1817 43.90 0 1908183..1909100 - 305 157692615 yqiQ BPUM_1846 - carboxyvinyl-carboxyphosphonate phosphorylmutase 1818 44.19 0 1909113..1910549 - 478 157692616 prpD BPUM_1847 - 2-methylcitrate dehydratase 1819 42.69 0 1910552..1911694 - 380 157692617 mmgD BPUM_1848 - citrate synthase 3 1820 36.48 -1 1911863..1912402 - 179 157692618 yozB BPUM_1849 - hypothetical protein 1821 38.29 0 1912529..1913113 + 194 157692619 yocC BPUM_1850 - hypothetical protein 1822 39.77 0 1913267..1914058 - 263 157692620 yocH BPUM_1851 - cell wall protein 1823 40.01 0 1914315..1916096 - 593 157692621 yocI BPUM_1852 - ATP-dependent helicase 1824 40.20 0 1916548..1916955 - 135 157692622 yocK BPUM_1853 - general stress protein 1825 41.05 0 1917140..1917787 - 215 157692623 yhfK BPUM_1854 - hypothetical protein 1826 38.35 0 1917965..1918303 - 112 157692624 yozO BPUM_1855 - hypothetical protein 1827 37.09 -1 1918770..1918982 - 70 157692625 yozC BPUM_1856 - hypothetical protein 1828 44.38 0 1919196..1920680 + 494 157692626 dhaS BPUM_1857 - aldehyde dehydrogenase (NAD(+)) 1829 42.56 0 1920783..1922657 + 624 157692627 sqhC BPUM_1858 - squalene-hopene cyclase 1830 43.19 0 1922650..1923471 + 273 157692628 sodF BPUM_1859 - iron (Fe) superoxide dismutase 1831 40.69 0 1923622..1924572 + 316 157692629 yocS BPUM_1860 - BASS family bile acid:sodium (Na+) symporter 1832 45.58 +1 1924607..1925863 - 418 157692630 odhB BPUM_1861 - dihydrolipoamide acetyltransferase 1833 41.73 0 1925878..1928712 - 944 157692631 odhA BPUM_1862 - alpha-ketoglutarate decarboxylase 1834 41.05 0 1928938..1930854 - 638 157692632 yojO BPUM_1863 - regulator of nitric oxide reductase 1835 43.12 0 1930866..1931744 - 292 157692633 - BPUM_1864 - nitric oxide reductase 1836 44.28 0 1931834..1932454 - 206 157692634 yojM BPUM_1865 - copper/zinc (Cu/Zn) superoxide dismutase 1837 39.67 0 1934235..1934849 - 204 157692635 - BPUM_1867 - hypothetical protein 1838 42.66 0 1935113..1936474 + 453 157692636 - BPUM_1868 - multidrug efflux protein 1839 42.34 0 1936520..1937185 - 221 157692637 - BPUM_1869 - hypothetical protein 1840 42.45 0 1937204..1937554 - 116 157692638 - BPUM_1870 - hypothetical protein 1841 39.72 0 1937551..1937832 - 93 157692639 - BPUM_1871 - hypothetical protein 1842 39.07 0 1937911..1938816 - 301 157692640 rarD BPUM_1872 - DMT superfamily drug/metabolite transporter 1843 39.45 0 1938912..1939385 + 157 157692641 yozR BPUM_1873 - hypothetical protein 1844 50.23 +2 1939426..1939644 - 72 157692642 - BPUM_1874 - hypothetical protein 1845 39.34 0 1939720..1940052 - 110 157692643 yodB BPUM_1875 - transcriptional regulator 1846 39.32 0 1940192..1940809 + 205 157692644 - BPUM_1876 - nitroreductase 1847 39.22 0 1941046..1941249 + 67 157692645 - BPUM_1877 - hypothetical protein 1848 40.96 0 1941249..1942742 + 497 157692646 yodF BPUM_1878 - SSS family solute/sodium (Na+) symporter 1849 32.13 -2 1942821..1943735 - 304 157692647 - BPUM_1879 - O-methyltransferase 1850 40.76 0 1944081..1945466 - 461 157692648 ctpA BPUM_1880 - peptidase 1851 43.78 0 1945618..1946316 + 232 157692649 - BPUM_1881 - hypothetical protein 1852 48.02 +1 1946409..1946660 + 83 157692650 yodI BPUM_1882 - spore protein YodI 1853 38.99 0 1946711..1947541 - 276 157692651 yodJ BPUM_1883 - serine-type D-Ala-D-Ala carboxypeptidase 1854 41.95 0 1947610..1948305 - 231 157692652 deoD BPUM_1884 - purine-nucleoside phosphorylase 1855 40.88 0 1948419..1948736 - 105 157692653 - BPUM_1885 - hypothetical protein 1856 39.74 0 1948791..1949399 - 202 157692654 - BPUM_1886 - phosphatase 1857 40.94 0 1949448..1949618 - 56 157692655 yozD BPUM_1887 - hypothetical protein 1858 34.62 -1 1949639..1949872 + 77 157692656 - BPUM_1888 - hypothetical protein 1859 38.77 0 1949869..1950549 - 226 157692657 yodN BPUM_1889 - hypothetical protein 1860 36.00 -1 1950694..1950918 - 74 157692658 yozE BPUM_1890 - hypothetical protein 1861 37.23 -1 1950997..1951278 - 93 157692659 - BPUM_1891 - hypothetical protein 1862 42.97 0 1951281..1952681 - 466 157692660 kamA BPUM_1892 - lysine 2,3-aminomutase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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