version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1667 32.47 -2 1745147..1745377 + 76 157692465 ynzC BPUM_1689 - hypothetical protein 1668 45.31 +1 1745565..1747568 + 667 157692466 tkt BPUM_1690 - transketolase 1669 39.60 0 1747766..1748212 + 148 157692467 yneE BPUM_1691 - hypothetical protein 1670 39.27 0 1748297..1748515 + 72 157692468 yneF BPUM_1692 - hypothetical protein 1671 38.10 0 1748779..1748967 - 62 157692469 ynzD BPUM_1693 - hypothetical protein 1672 40.96 0 1749161..1749868 + 235 157692470 ccdA BPUM_1694 - stage V sporulation cytochrome c-type biogenesis protein 1673 37.89 0 1749963..1750445 + 160 157692471 yneJ BPUM_1695 - hypothetical protein 1674 37.53 0 1750466..1750894 - 142 157692472 yneK BPUM_1696 - hypothetical protein 1675 39.46 0 1751659..1751805 - 48 157692473 sspP BPUM_1697 - small acid-soluble spore protein P 1676 35.37 -1 1751822..1751968 - 48 157692474 sspO BPUM_1698 - acid-soluble spore protein O 1677 42.56 0 1752189..1754918 + 909 157692475 citB BPUM_1699 - aconitate hydratase 1678 39.88 0 1754993..1755496 + 167 157692476 yneN BPUM_1700 - hypothetical protein 1679 31.11 -2 1755559..1755693 + 44 157692477 - BPUM_1701 - hypothetical protein 1680 40.14 0 1755742..1755888 + 48 157692478 sspN BPUM_1702 - acid-soluble spore protein N 1681 36.63 -1 1755902..1756144 + 80 157692479 tlp BPUM_1703 - small acid-soluble spore protein Tlp 1682 39.72 0 1756248..1756670 + 140 157692480 yneP BPUM_1704 - 4-hydroxybenzoyl-CoA thioesterase 1683 41.03 0 1756674..1756985 + 103 157692481 yneQ BPUM_1705 - hypothetical protein 1684 36.46 -1 1757025..1757312 - 95 157692482 yneR BPUM_1706 - hypothetical protein 1685 40.14 0 1757414..1758001 - 195 157692483 yneS BPUM_1707 - putative glycerol-3-phosphate acyltransferase PlsY 1686 42.03 0 1758150..1758563 + 137 157692484 yneT BPUM_1708 - CoA-binding protein 1687 42.63 0 1758954..1760921 + 655 157692485 parE BPUM_1709 - DNA topoisomerase IV subunit B 1688 42.23 0 1760924..1763362 + 812 157692486 parC BPUM_1710 - DNA topoisomerase IV subunit A 1689 36.51 -1 1763414..1763539 - 41 157692487 - BPUM_1711 - hypothetical protein 1690 38.39 0 1763583..1763918 - 111 157692488 ynfC BPUM_1712 - hypothetical protein 1691 42.66 0 1764113..1765291 - 392 157692489 - BPUM_1713 - major facilitator transporter 1692 36.00 -1 1765343..1765492 - 49 157692490 - BPUM_1714 - hypothetical protein 1693 39.03 0 1766349..1767383 - 344 157692491 - BPUM_1716 - NADH-dependent flavin dehydrogenase 1694 33.56 -2 1767502..1767933 - 143 157692492 - BPUM_1717 - MarR family transcriptional regulator 1695 30.76 -2 1770270..1770851 - 193 157692493 - BPUM_1721 - flavodoxin 1696 35.65 -1 1770975..1771319 + 114 157692494 ydzF BPUM_1722 - MarR family transcriptional regulator 1697 40.31 0 1771472..1772575 - 367 157692495 thrC2 BPUM_1723 - threonine synthase 1698 37.87 0 1772648..1773022 - 124 157692496 yabJA BPUM_1724 - endoribonuclease L-PSP 1699 32.26 -2 1773034..1773684 - 216 157692497 - BPUM_1725 - transcriptional regulator 1700 41.27 0 1774351..1774539 + 62 157692498 - BPUM_1727 - hypothetical protein 1701 40.23 0 1774610..1774957 - 115 157692499 - BPUM_1728 - hypothetical protein 1702 36.38 -1 1775036..1775461 - 141 157692500 - BPUM_1729 - MarR family transcriptional regulator 1703 33.51 -2 1775534..1776103 - 189 157692501 - BPUM_1730 - TetR family transcriptional regulator 1704 40.46 0 1776284..1776844 + 186 157692502 - BPUM_1731 - flavin reductase 1705 40.35 0 1776886..1777797 + 303 157692503 - BPUM_1732 - hypothetical protein 1706 36.79 -1 1777809..1778126 + 105 157692504 - BPUM_1733 - hypothetical protein 1707 41.98 0 1778641..1778802 + 53 157692505 - BPUM_1735 - hypothetical protein 1708 39.58 0 1778900..1779667 + 255 157692506 - BPUM_1736 - hypothetical protein 1709 40.90 0 1779711..1780133 - 140 157692507 - BPUM_1737 - hypothetical protein 1710 35.90 -1 1780252..1780524 - 90 157692508 - BPUM_1738 - hypothetical protein 1711 39.48 0 1780727..1781653 - 308 157692509 - BPUM_1739 - esterase 1712 36.09 -1 1781684..1782082 - 132 157692510 - BPUM_1740 - transcriptional regulator 1713 38.79 0 1782310..1783776 - 488 157692511 - BPUM_1741 - glycosyl hydrolase 1714 40.31 0 1783800..1785692 - 630 157692512 - BPUM_1742 - PTS family glucose/glucoside (glc) porter component IIBCA 1715 34.99 -1 1785812..1786654 - 280 157692513 - BPUM_1743 - transcription antiterminator 1716 35.60 -1 1787029..1787337 + 102 157692514 - BPUM_1744 - hypothetical protein 1717 38.96 0 1787392..1788795 - 467 157692515 - BPUM_1745 - sensor histidine kinase 1718 42.23 0 1788798..1789505 - 235 157692516 - BPUM_1746 - response regulator 1719 44.94 +1 1789638..1790903 - 421 157692517 ynfF BPUM_1747 - glycosyl hydrolase 1720 47.20 +1 1790938..1792473 - 511 157692518 xynD BPUM_1748 - endo-1,4-beta-xylanase 1721 45.72 +1 1792697..1794157 - 486 157692519 mmsA BPUM_1749 - methylmalonate-semialdehyde dehydrogenase (acylating) 1722 43.18 0 1794496..1795836 - 446 157692520 melA BPUM_1750 - alpha-galactosidase 1723 42.36 0 1795870..1796700 - 276 157692521 amyC BPUM_1751 - sugar ABC transporter ATP-binding/membrane protein 1724 42.55 0 1796700..1797632 - 310 157692522 amyD BPUM_1752 - sugar ABC transporter ATP-binding/membrane protein 1725 42.48 0 1797663..1798919 - 418 157692523 msmE BPUM_1753 - sugar ABC transporter ATP-binding protein 1726 44.19 0 1799138..1800178 - 346 157692524 msmR BPUM_1754 - transcriptional regulator 1727 41.56 0 1800360..1801052 - 230 157692525 - BPUM_1755 - allulose-6-phosphate 3-epimerase 1728 43.78 0 1801070..1802332 - 420 157692526 ulaA BPUM_1756 - ascorbate-specific PTS system enzyme IIC 1729 39.70 0 1802358..1802624 - 88 157692527 sgaB BPUM_1757 - PTS family L-ascorbate (L-asc) porter component IIB 1730 40.50 0 1802640..1804676 - 678 157692528 - BPUM_1758 - PTS family L-ascorbate (L-asc) porter component IIA 1731 26.76 -2 1804997..1805437 - 146 157692529 - BPUM_1759 - hypothetical protein 1732 32.89 -2 1805787..1806011 + 74 157692530 - BPUM_1760 - hypothetical protein 1733 31.37 -2 1806077..1806535 - 152 157692531 - BPUM_1761 - hypothetical protein 1734 30.30 -2 1806628..1806990 - 120 157692532 - BPUM_1762 - hypothetical protein 1735 36.64 -1 1807141..1807473 - 110 157692533 - BPUM_1763 - hypothetical protein 1736 41.25 0 1807520..1809148 - 542 157692534 - BPUM_1764 - hypothetical protein 1737 42.89 0 1809524..1809994 - 156 157692535 - BPUM_1765 - MarR family transcriptional regulator 1738 42.75 0 1810041..1811633 + 530 157692536 - BPUM_1766 - major facilitator transporter 1739 44.60 0 1811673..1812542 - 289 157692537 - BPUM_1767 - fructose-bisphosphate aldolase 1740 42.05 0 1812545..1813003 - 152 157692538 - BPUM_1768 - PTS family fructose/mannitol porter component IIA 1741 44.21 0 1813019..1814434 - 471 157692539 fruAA BPUM_1769 - PTS family fructose porter component IIBC 1742 40.87 0 1814447..1815361 - 304 157692540 - BPUM_1770 - 1-phosphofructokinase 1743 37.97 0 1815492..1816268 - 258 157692541 - BPUM_1771 - transcriptional regulator 1744 41.21 0 1816425..1817834 + 469 157692542 - BPUM_1772 - phospholipase D 1745 43.21 0 1817845..1818330 - 161 157692543 - BPUM_1773 - hypothetical protein 1746 39.79 0 1818352..1819032 - 226 157692544 - BPUM_1774 - Crp family transcriptional regulator 1747 43.19 0 1819046..1819471 - 141 157692545 - BPUM_1775 - hypothetical protein 1748 43.14 0 1819683..1821110 + 475 157692546 - BPUM_1776 - aldehyde dehydrogenase 1749 43.82 0 1821322..1823142 + 606 157692547 cysJ BPUM_1777 - sulfite reductase (NADPH) alpha subunit 1750 44.04 0 1823180..1824898 + 572 157692548 cysI BPUM_1778 - sulfite reductase subunit beta 1751 45.70 +1 1824928..1826859 - 643 157692549 acsA2 BPUM_1779 - acetate--CoA ligase 1752 45.29 +1 1826877..1828406 - 509 157692550 yngE BPUM_1780 - acetyl-CoA carboxylase 1753 45.85 +1 1828419..1829201 - 260 157692551 yngF BPUM_1781 - enoyl-CoA hydratase 1754 43.23 0 1829216..1830124 - 302 157692552 yngG BPUM_1782 - hydroxymethylglutaryl-CoA lyase 1755 42.13 0 1830136..1830351 - 71 157692553 pycAA BPUM_1783 - acetyl-CoA carboxylase 1756 44.59 0 1830348..1831697 - 449 157692554 yngH BPUM_1784 - acetyl-CoA carboxylase alpha subunit 1757 45.85 +1 1831706..1833343 - 545 157692555 yngI BPUM_1785 - long-chain-fatty-acid--CoA ligase 1758 45.67 +1 1833386..1834528 - 380 157692556 yngJ BPUM_1786 - acyl-CoA dehydrogenase 1759 42.99 0 1834671..1836089 - 472 157692557 - BPUM_1787 - hypothetical protein 1760 43.00 0 1836234..1837040 - 268 157692558 ptp BPUM_1788 - protein-tyrosine-phosphatase 1761 40.52 0 1837163..1837927 + 254 157692559 iolR BPUM_1789 - DeoR family transcriptional regulator 1762 39.77 0 1837947..1838552 - 201 157692560 - BPUM_1790 - hypothetical protein 1763 42.58 0 1838660..1839784 + 374 157692561 - BPUM_1791 - carbohydrate diacid transcriptional regulator 1764 45.55 +1 1839856..1841271 + 471 157692562 glcD BPUM_1792 - (S)-2-hydroxy-acid oxidase subunit D 1765 47.40 +1 1841268..1842611 + 447 157692563 glcF BPUM_1793 - (S)-2-hydroxy-acid oxidase subunit F 1766 42.17 0 1842676..1844169 + 497 157692564 gerA BPUM_1794 - spore germination protein A 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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