version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1591 43.59 0 1675528..1677429 + 633 157692389 mutL BPUM_1609 - DNA mismatch repair protein 1592 44.19 0 1677505..1678038 - 177 157692390 yuaB BPUM_1610 - hypothetical protein 1593 39.17 0 1678164..1678574 - 136 157692391 - BPUM_1611 - hypothetical protein 1594 38.17 0 1678682..1678867 - 61 157692392 - BPUM_1612 - hypothetical protein 1595 38.57 0 1679131..1679607 + 158 157692393 carD BPUM_1613 - transcription factor CarD 1596 38.27 0 1679919..1680668 + 249 157692394 ymaC BPUM_1614 - phage-related protein YmaC 1597 38.29 0 1680834..1681982 + 382 157692395 - BPUM_1615 - response regulator 1598 43.44 0 1682075..1683400 - 441 157692396 aprX BPUM_1616 - protease 1599 43.67 0 1683986..1684720 + 244 157692397 - BPUM_1617 - hypothetical protein 1600 44.44 0 1684798..1685247 + 149 157692398 ymaD BPUM_1618 - osmotic stress regulator 1601 40.65 0 1685294..1685662 - 122 157692399 ebrB BPUM_1619 - DMT superfamily drug/metabolite transporter 1602 42.77 0 1685676..1685993 - 105 157692400 ebrA BPUM_1620 - DMT superfamily drug/metabolite transporter 1603 41.21 0 1685993..1686538 - 181 157692401 - BPUM_1621 - TetR family transcriptional regulator 1604 48.41 +2 1686651..1686902 - 83 157692402 ymaG BPUM_1622 - spore protein YmaG 1605 45.52 +1 1687007..1687408 + 133 157692403 ymaF BPUM_1623 - hypothetical protein 1606 41.67 0 1687439..1688434 + 331 157692404 miaA BPUM_1624 - tRNA delta(2)-isopentenylpyrophosphate transferase 1607 36.49 -1 1688460..1688681 + 73 157692405 ymaH BPUM_1625 - RNA-binding protein Hfq 1608 37.88 0 1688839..1689168 + 109 157692406 ymzC BPUM_1626 - hypothetical protein 1609 37.09 -1 1689248..1689460 + 70 157692407 ymzA BPUM_1627 - hypothetical protein 1610 37.34 -1 1689721..1690119 + 132 157692408 nrdI BPUM_1628 - ribonucleotide reductase stimulatory protein 1611 39.37 0 1690079..1692181 + 700 157692409 nrdE BPUM_1629 - ribonucleotide-diphosphate reductase subunit alpha 1612 37.82 0 1692199..1693179 + 326 157692410 nrdF BPUM_1630 - ribonucleotide-diphosphate reductase subunit beta 1613 41.10 0 1693264..1693881 + 205 157692411 ymaB BPUM_1631 - MutT/NUDIX family hydrolase 1614 45.06 +1 1693948..1694706 - 252 157692412 cwlC BPUM_1632 - N-acetylmuramoyl-L-alanine amidase 1615 40.52 0 1695027..1695986 + 319 157692413 spoVK BPUM_1633 - stage V sporulation protein K 1616 42.04 0 1696108..1697370 + 420 157692414 - BPUM_1634 - HflX family GTP-binding protein 1617 43.40 0 1697389..1698669 + 426 157692415 ynbB BPUM_1635 - aluminum resistance protein 1618 41.36 0 1698760..1699170 + 136 157692416 glnR BPUM_1636 - glutamine synthetase transcriptional repressor 1619 42.02 0 1699230..1700564 + 444 157692417 glnA BPUM_1637 - glutamate--ammonia ligase 1620 43.79 0 1701045..1701197 + 50 157692418 - BPUM_1638 - hypothetical protein 1621 32.77 -2 1701404..1702471 + 355 157692419 - BPUM_1639 - patatin phospholipase 1622 27.46 -2 1703198..1703776 + 192 157692420 - BPUM_1640 - hypothetical protein 1623 40.20 0 1703943..1704146 + 67 157692421 - BPUM_1641 - hypothetical protein 1624 44.87 +1 1704147..1704380 + 77 157692422 - BPUM_1642 - hypothetical protein 1625 37.33 -1 1704344..1704493 + 49 157692423 - BPUM_1643 - hypothetical protein 1626 32.09 -2 1705102..1705584 + 160 157692424 yjcP BPUM_1645 - hypothetical protein 1627 31.88 -2 1705664..1705870 + 68 157692425 - BPUM_1646 - hypothetical protein 1628 27.54 -2 1707586..1708482 + 298 157692426 yobJ BPUM_1649 - membrane protein 1629 36.92 -1 1708517..1708795 + 92 157692427 - BPUM_1650 - hypothetical protein 1630 34.22 -1 1709199..1710332 + 377 157692428 - BPUM_1651 - aspartate phosphatase response regulator 1631 38.94 0 1710723..1712648 + 641 157692429 - BPUM_1652 - hypothetical protein 1632 31.06 -2 1712654..1713136 + 160 157692430 - BPUM_1653 - hypothetical protein 1633 39.56 0 1713310..1714032 + 240 157692431 - BPUM_1654 - hypothetical protein 1634 30.38 -2 1714032..1714505 + 157 157692432 - BPUM_1655 - hypothetical protein 1635 42.44 0 1714770..1715219 - 149 157692433 - BPUM_1656 - hypothetical protein 1636 38.86 0 1715432..1715974 + 180 157692434 - BPUM_1657 - GNAT family acetyltransferase 1637 41.41 0 1716115..1716696 + 193 157692435 - BPUM_1658 - phosphatidate phosphatase 1638 39.52 0 1716749..1717120 - 123 157692436 ydhG BPUM_1659 - hypothetical protein 1639 38.42 0 1717512..1718180 + 222 157692437 - BPUM_1660 - hypothetical protein 1640 46.09 +1 1718255..1718599 + 114 157692438 - BPUM_1661 - hypothetical protein 1641 52.02 +2 1718644..1719681 + 345 157692439 - BPUM_1662 - hypothetical protein 1642 38.90 0 1719939..1721051 + 370 157692440 - BPUM_1663 - aspartate phosphatase response regulator 1643 50.85 +2 1721511..1721744 + 77 157692441 - BPUM_1664 - hypothetical protein 1644 42.67 0 1721785..1722480 - 231 157692442 yoaK BPUM_1665 - hypothetical protein 1645 41.91 0 1722515..1724380 - 621 157692443 ykoU BPUM_1666 - ATP-dependent DNA ligase 1646 38.63 0 1724497..1725345 + 282 157692444 ykoV BPUM_1667 - Ku-like DNA end-binding protein 1647 43.24 0 1725369..1725812 - 147 157692445 ydaT BPUM_1668 - hypothetical protein 1648 40.98 0 1725976..1726446 + 156 157692446 - BPUM_1669 - glutathione transferase 1649 42.27 0 1726495..1726908 + 137 157692447 - BPUM_1670 - transcriptional regulator 1650 45.07 +1 1727010..1727861 + 283 157692448 - BPUM_1671 - nucleoside diphosphate glycosyl epimerase 1651 43.65 0 1728028..1728744 + 238 157692449 yvfV BPUM_1672 - (S)-2-hydroxy-acid oxidase 1652 45.78 +1 1728766..1730187 + 473 157692450 yvfW BPUM_1673 - iron-sulfur cluster-binding protein 1653 45.37 +1 1730187..1730909 + 240 157692451 - BPUM_1674 - hypothetical protein 1654 40.26 0 1731056..1731964 + 302 157692452 - BPUM_1675 - DMT superfamily drug/metabolite transporter 1655 35.42 -1 1731977..1732168 - 63 157692453 - BPUM_1676 - hypothetical protein 1656 41.45 0 1732279..1734495 + 738 157692454 - BPUM_1677 - phosphoprotein phosphatase 1657 40.07 0 1735497..1736075 + 192 157692455 yrhI BPUM_1679 - transcriptional regulator 1658 42.49 0 1736097..1739240 + 1047 157692456 yrhJ BPUM_1680 - NADPH--hemoprotein reductase 1659 41.12 0 1739432..1740343 + 303 157692457 mpr BPUM_1681 - glutamyl endopeptidase 1660 45.45 +1 1740557..1740985 + 142 157692458 nucB BPUM_1682 - sporulation-specific nuclease 1661 37.22 -1 1741124..1741972 + 282 157692459 yojH BPUM_1683 - hypothetical protein 1662 34.62 -1 1742004..1742546 - 180 157692460 yoeB BPUM_1684 - hypothetical protein 1663 45.75 +1 1742841..1743275 + 144 157692461 - BPUM_1685 - hypothetical protein 1664 40.10 0 1743321..1743941 - 206 157692462 lexA BPUM_1686 - LexA repressor 1665 36.86 -1 1744101..1744412 + 103 157692463 yneA BPUM_1687 - LysM family cell division regulator 1666 41.20 0 1744430..1745077 + 215 157692464 yneB BPUM_1688 - recombinase 1667 32.47 -2 1745147..1745377 + 76 157692465 ynzC BPUM_1689 - hypothetical protein 1668 45.31 +1 1745565..1747568 + 667 157692466 tkt BPUM_1690 - transketolase 1669 39.60 0 1747766..1748212 + 148 157692467 yneE BPUM_1691 - hypothetical protein 1670 39.27 0 1748297..1748515 + 72 157692468 yneF BPUM_1692 - hypothetical protein 1671 38.10 0 1748779..1748967 - 62 157692469 ynzD BPUM_1693 - hypothetical protein 1672 40.96 0 1749161..1749868 + 235 157692470 ccdA BPUM_1694 - stage V sporulation cytochrome c-type biogenesis protein 1673 37.89 0 1749963..1750445 + 160 157692471 yneJ BPUM_1695 - hypothetical protein 1674 37.53 0 1750466..1750894 - 142 157692472 yneK BPUM_1696 - hypothetical protein 1675 39.46 0 1751659..1751805 - 48 157692473 sspP BPUM_1697 - small acid-soluble spore protein P 1676 35.37 -1 1751822..1751968 - 48 157692474 sspO BPUM_1698 - acid-soluble spore protein O 1677 42.56 0 1752189..1754918 + 909 157692475 citB BPUM_1699 - aconitate hydratase 1678 39.88 0 1754993..1755496 + 167 157692476 yneN BPUM_1700 - hypothetical protein 1679 31.11 -2 1755559..1755693 + 44 157692477 - BPUM_1701 - hypothetical protein 1680 40.14 0 1755742..1755888 + 48 157692478 sspN BPUM_1702 - acid-soluble spore protein N 1681 36.63 -1 1755902..1756144 + 80 157692479 tlp BPUM_1703 - small acid-soluble spore protein Tlp 1682 39.72 0 1756248..1756670 + 140 157692480 yneP BPUM_1704 - 4-hydroxybenzoyl-CoA thioesterase 1683 41.03 0 1756674..1756985 + 103 157692481 yneQ BPUM_1705 - hypothetical protein 1684 36.46 -1 1757025..1757312 - 95 157692482 yneR BPUM_1706 - hypothetical protein 1685 40.14 0 1757414..1758001 - 195 157692483 yneS BPUM_1707 - putative glycerol-3-phosphate acyltransferase PlsY 1686 42.03 0 1758150..1758563 + 137 157692484 yneT BPUM_1708 - CoA-binding protein 1687 42.63 0 1758954..1760921 + 655 157692485 parE BPUM_1709 - DNA topoisomerase IV subunit B 1688 42.23 0 1760924..1763362 + 812 157692486 parC BPUM_1710 - DNA topoisomerase IV subunit A 1689 36.51 -1 1763414..1763539 - 41 157692487 - BPUM_1711 - hypothetical protein 1690 38.39 0 1763583..1763918 - 111 157692488 ynfC BPUM_1712 - hypothetical protein 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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