version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1508 43.39 0 1578687..1580018 + 443 157692306 fliK BPUM_1525 - flagellar hook-length control protein 1509 38.70 0 1580018..1580464 + 148 157692307 flgD BPUM_1526 - flagellar basal body rod modification protein 1510 40.40 0 1580482..1581273 + 263 157692308 flgG BPUM_1527 - flagellar basal body rod protein FlgG 1511 34.72 -1 1581311..1581526 + 71 157692309 - BPUM_1528 - hypothetical protein 1512 36.13 -1 1581523..1581951 + 142 157692310 fliL BPUM_1529 - flagellar basal body-associated protein FliL 1513 40.84 0 1581984..1582982 + 332 157692311 fliM BPUM_1530 - flagellar motor switch protein FliM 1514 43.47 0 1582972..1584096 + 374 157692312 fliY BPUM_1531 - flagellar motor switch protein 1515 39.67 0 1584124..1584486 + 120 157692313 cheY BPUM_1532 - response regulator CheY 1516 39.09 0 1584505..1585164 + 219 157692314 fliZ BPUM_1533 - flagella biosynthesis protein FliZ 1517 36.79 -1 1585157..1585822 + 221 157692315 fliP BPUM_1534 - flagellar biosynthesis protein FliP 1518 43.33 0 1585839..1586108 + 89 157692316 fliQ BPUM_1535 - flagellar biosynthesis protein FliQ 1519 40.77 0 1586115..1586894 + 259 157692317 fliR BPUM_1536 - flagellar biosynthesis protein FliR 1520 38.93 0 1586891..1587979 + 362 157692318 flhB BPUM_1537 - flagellar biosynthesis protein FlhB 1521 42.97 0 1588009..1590042 + 677 157692319 flhA BPUM_1538 - flagellar biosynthesis protein FlhA 1522 41.76 0 1590042..1591157 + 371 157692320 flhF BPUM_1539 - flagellar biosynthesis regulator FlhF 1523 41.83 0 1591154..1592059 + 301 157692321 ylxH BPUM_1540 - ATPase 1524 44.41 0 1592056..1593129 + 357 157692322 cheB BPUM_1541 - chemotaxis-specific methylesterase 1525 41.41 0 1593135..1595165 + 676 157692323 cheA BPUM_1542 - sensor histidine kinase CheA 1526 40.69 0 1595190..1595651 + 153 157692324 cheW BPUM_1543 - chemotaxis protein CheW 1527 40.99 0 1595664..1596290 + 208 157692325 cheC BPUM_1544 - chemotaxis protein CheC 1528 43.71 0 1596290..1596790 + 166 157692326 cheD BPUM_1545 - chemoreceptor glutamine deamidase CheD 1529 43.10 0 1596815..1597582 + 255 157692327 sigD BPUM_1546 - RNA polymerase sigma factor SigD 1530 41.11 0 1597604..1598143 + 179 157692328 ylxL BPUM_1547 - hypothetical protein 1531 40.82 0 1599124..1600005 + 293 157692329 tsf BPUM_1549 - elongation factor Ts 1532 42.81 0 1600210..1600863 + 217 157692330 pyrH BPUM_1550 - UMP kinase 1533 37.99 0 1600865..1601422 + 185 157692331 frr BPUM_1551 - peptide chain release factor RF4 1534 42.78 0 1601552..1602334 + 260 157692332 uppS BPUM_1552 - di-trans,poly-cis-decaprenylcistransferase 1535 41.20 0 1602443..1603141 + 232 157692333 cdsA BPUM_1553 - phosphatidate cytidylyltransferase 1536 41.84 0 1603180..1604331 + 383 157692334 dxr BPUM_1554 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1537 41.15 0 1604338..1605603 + 421 157692335 yluC BPUM_1555 - M50 family peptidase 1538 43.23 0 1605683..1607380 + 565 157692336 proS1 BPUM_1556 - prolyl-tRNA synthetase 1539 41.89 0 1607456..1611769 + 1437 157692337 polC BPUM_1557 - DNA polymerase III PolC 1540 44.19 0 1612188..1614038 + 616 157692338 bglC BPUM_1558 - cellulase 1541 44.87 +1 1614069..1616174 + 701 157692339 celB BPUM_1559 - cellulose 1,4-beta-cellobiosidase 1542 41.22 0 1616259..1617488 + 409 157692340 - BPUM_1560 - glycoside hydrolase 1543 43.21 0 1617507..1618640 + 377 157692341 - BPUM_1561 - mannan endo-1,4-beta-mannosidase 1544 39.45 0 1618879..1619352 + 157 157692342 ylxS BPUM_1562 - hypothetical protein 1545 41.31 0 1619385..1620500 + 371 157692343 nusA BPUM_1563 - transcription elongation factor NusA 1546 40.00 0 1620507..1620806 + 99 157692344 ylxR BPUM_1564 - hypothetical protein 1547 42.90 0 1620793..1621095 + 100 157692345 ylxQ BPUM_1565 - hypothetical protein 1548 41.11 0 1621115..1623235 + 706 157692346 infB BPUM_1566 - translation initiation factor IF-2 1549 41.22 0 1623232..1623510 + 92 157692347 - BPUM_1567 - hypothetical protein 1550 42.17 0 1623528..1623878 + 116 157692348 rbfA BPUM_1568 - ribosome-binding factor A 1551 41.61 0 1623947..1624876 + 309 157692349 truB BPUM_1569 - tRNA pseudouridine 55 synthase 1552 42.55 0 1624895..1625860 + 321 157692350 ribC BPUM_1570 - bifunctional riboflavin kinase/FMN adenylyltransferase 1553 38.52 0 1626001..1626270 + 89 157692351 rpsO BPUM_1571 - 30S ribosomal protein S15 1554 41.64 0 1626451..1628568 + 705 157692352 pnpA BPUM_1572 - polynucleotide phosphorylase/polyadenylase 1555 39.52 0 1628683..1629636 + 317 157692353 ylxY BPUM_1573 - polysaccharide deacetylase 1556 41.71 0 1629670..1630899 + 409 157692354 mlpA BPUM_1574 - M16B subfamily peptidase 1557 40.69 0 1630973..1631896 + 307 157692355 aph BPUM_1575 - kanamycin kinase 1558 46.15 +1 1631967..1632239 + 90 157692356 ymxH BPUM_1576 - hypothetical protein 1559 45.63 +1 1632363..1633265 + 300 157692357 spoVFA BPUM_1577 - dipicolinate synthase subunit A 1560 42.76 0 1633262..1633855 + 197 157692358 spoVFB BPUM_1578 - dipicolinate synthase subunit B 1561 42.06 0 1633995..1635014 + 339 157692359 asd BPUM_1579 - aspartate-semialdehyde dehydrogenase 1562 45.43 +1 1635107..1636321 + 404 157692360 dapG BPUM_1580 - aspartate kinase I 1563 42.45 0 1636352..1637218 + 288 157692361 dapA2 BPUM_1581 - dihydrodipicolinate synthase 1564 40.65 0 1637390..1639057 + 555 157692362 - BPUM_1582 - metallo beta lactamase 1565 43.07 0 1639161..1639910 + 249 157692363 clpP1 BPUM_1583 - endopeptidase ClpP 1566 40.51 0 1639907..1640143 + 78 157692364 - BPUM_1584 - hypothetical protein 1567 43.45 0 1640254..1642626 + 790 157692365 spoIIIE BPUM_1585 - stage III sporulation DNA translocase E 1568 40.77 0 1642792..1643517 + 241 157692366 ymfC BPUM_1586 - GntR family transcriptional regulator 1569 38.34 0 1645167..1648283 + 1038 157692367 - BPUM_1587 - resistance-nodulation-cell division acriflavin:proton (H+) antiporter 1570 41.37 0 1648429..1649709 + 426 157692368 - BPUM_1588 - M16 family metallopeptidase 1571 38.90 0 1649706..1650998 + 430 157692369 - BPUM_1589 - M16C subfamily metallopeptidase 1572 37.74 0 1651149..1651625 + 158 157692370 - BPUM_1590 - MarR family transcriptional regulator 1573 39.36 0 1651603..1654722 + 1039 157692371 ydgH BPUM_1591 - resistance-nodulation-cell division acriflavin:proton (H+) antiporter 1574 44.86 +1 1654754..1655482 + 242 157692372 ymfI BPUM_1592 - 3-ketoacyl-(acyl-carrier-protein) reductase 1575 39.92 0 1655556..1655813 + 85 157692373 ymfJ BPUM_1593 - hypothetical protein 1576 39.77 0 1655945..1656736 + 263 157692374 - BPUM_1594 - hypothetical protein 1577 41.59 0 1656751..1657671 + 306 157692375 ymfM BPUM_1595 - transcription regulation protein 1578 42.78 0 1657747..1658328 + 193 157692376 pgsA BPUM_1596 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1579 45.08 +1 1658345..1659595 + 416 157692377 cinA BPUM_1597 - competence damage-inducible protein A 1580 42.46 0 1659772..1660812 + 346 157692378 recA BPUM_1598 - recombination protein A 1581 42.87 0 1661118..1662680 + 520 157692379 ymdA BPUM_1599 - phosphodiesterase 1582 40.88 0 1662768..1663562 + 264 157692380 ymdB BPUM_1600 - hypothetical protein 1583 45.98 +1 1663764..1664024 + 86 157692381 spoVS BPUM_1601 - stage V sporulation protein S 1584 41.22 0 1664227..1667271 + 1014 157692382 yerP BPUM_1602 - resistance-nodulation-cell division acriflavin:proton (H+) antiporter 1585 44.51 0 1667446..1668510 + 354 157692383 tdh BPUM_1603 - L-threonine 3-dehydrogenase 1586 43.65 0 1668507..1669688 + 393 157692384 kbl BPUM_1604 - 2-amino-3-ketobutyrate coenzyme A ligase 1587 41.32 0 1669847..1671373 + 508 157692385 ymcB BPUM_1605 - tRNA 2-methylthioadenine synthetase 1588 37.24 -1 1671375..1671809 + 144 157692386 ymcA BPUM_1606 - hypothetical protein 1589 39.38 0 1672261..1672806 + 181 157692387 cotE BPUM_1607 - outer spore coat protein E 1590 41.13 0 1672931..1675507 + 858 157692388 mutS1 BPUM_1608 - DNA mismatch repair protein 1591 43.59 0 1675528..1677429 + 633 157692389 mutL BPUM_1609 - DNA mismatch repair protein 1592 44.19 0 1677505..1678038 - 177 157692390 yuaB BPUM_1610 - hypothetical protein 1593 39.17 0 1678164..1678574 - 136 157692391 - BPUM_1611 - hypothetical protein 1594 38.17 0 1678682..1678867 - 61 157692392 - BPUM_1612 - hypothetical protein 1595 38.57 0 1679131..1679607 + 158 157692393 carD BPUM_1613 - transcription factor CarD 1596 38.27 0 1679919..1680668 + 249 157692394 ymaC BPUM_1614 - phage-related protein YmaC 1597 38.29 0 1680834..1681982 + 382 157692395 - BPUM_1615 - response regulator 1598 43.44 0 1682075..1683400 - 441 157692396 aprX BPUM_1616 - protease 1599 43.67 0 1683986..1684720 + 244 157692397 - BPUM_1617 - hypothetical protein 1600 44.44 0 1684798..1685247 + 149 157692398 ymaD BPUM_1618 - osmotic stress regulator 1601 40.65 0 1685294..1685662 - 122 157692399 ebrB BPUM_1619 - DMT superfamily drug/metabolite transporter 1602 42.77 0 1685676..1685993 - 105 157692400 ebrA BPUM_1620 - DMT superfamily drug/metabolite transporter 1603 41.21 0 1685993..1686538 - 181 157692401 - BPUM_1621 - TetR family transcriptional regulator 1604 48.41 +2 1686651..1686902 - 83 157692402 ymaG BPUM_1622 - spore protein YmaG 1605 45.52 +1 1687007..1687408 + 133 157692403 ymaF BPUM_1623 - hypothetical protein 1606 41.67 0 1687439..1688434 + 331 157692404 miaA BPUM_1624 - tRNA delta(2)-isopentenylpyrophosphate transferase 1607 36.49 -1 1688460..1688681 + 73 157692405 ymaH BPUM_1625 - RNA-binding protein Hfq 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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